메뉴 건너뛰기




Volumn 115, Issue 3, 2005, Pages 221-237

The global gene expression response of Escherichia coli to L-phenylalanine

Author keywords

Escherichia coli; Genomewide expression analysis; Microarray; Phenylalanine; Shikimate; TyrR

Indexed keywords

AMINO ACIDS; BACTERIA; CONCENTRATION (PROCESS); GENE TRANSFER; METABOLISM; PH EFFECTS;

EID: 18944394722     PISSN: 01681656     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2004.08.017     Document Type: Article
Times cited : (43)

References (93)
  • 1
    • 0034703060 scopus 로고    scopus 로고
    • Global gene expression profiling in Escherichia coli K-12. the effects of integration host factor
    • S.M. Arfin, A.D. Long, E.T. Ito, L. Tolleri, M.M. Riehle, E.S. Paegle, and G.W. Hatfield Global gene expression profiling in Escherichia coli K-12. The effects of integration host factor J. Biol. Chem. 275 2000 29672 29684
    • (2000) J. Biol. Chem. , vol.275 , pp. 29672-29684
    • Arfin, S.M.1    Long, A.D.2    Ito, E.T.3    Tolleri, L.4    Riehle, M.M.5    Paegle, E.S.6    Hatfield, G.W.7
  • 3
    • 0030201057 scopus 로고    scopus 로고
    • Improving production of aromatic compounds in Escherichia coli by metabolic engineering
    • A. Berry Improving production of aromatic compounds in Escherichia coli by metabolic engineering Trends Biotechnol. 14 1996 250 256
    • (1996) Trends Biotechnol. , vol.14 , pp. 250-256
    • Berry, A.1
  • 4
    • 0035209901 scopus 로고    scopus 로고
    • Metabolic engineering for microbial production of aromatic amino acids and derived compounds
    • J. Bongaerts, M. Krämer, U. Müller, L. Raeven, and M. Wubbolts Metabolic engineering for microbial production of aromatic amino acids and derived compounds Metab. Eng. 3 2001 289 300
    • (2001) Metab. Eng. , vol.3 , pp. 289-300
    • Bongaerts, J.1    Krämer, M.2    Müller, U.3    Raeven, L.4    Wubbolts, M.5
  • 5
    • 0014864612 scopus 로고
    • Formation of aromatic amino acid pools in Escherichia coli K-12
    • K.D. Brown Formation of aromatic amino acid pools in Escherichia coli K-12 J. Bacteriol. 104 1970 177 188
    • (1970) J. Bacteriol. , vol.104 , pp. 177-188
    • Brown, K.D.1
  • 6
    • 0017197617 scopus 로고
    • Transport and utilization of the biosynthetic intermediate shikimic acid in Escherichia coli
    • K.D. Brown, and C.H. Doy Transport and utilization of the biosynthetic intermediate shikimic acid in Escherichia coli Biochim. Biophys. Acta 428 1976 550 562
    • (1976) Biochim. Biophys. Acta , vol.428 , pp. 550-562
    • Brown, K.D.1    Doy, C.H.2
  • 7
    • 0032190205 scopus 로고    scopus 로고
    • Transcriptional repression of gdhA in Escherichia coli is mediated by the Nac protein
    • L. Camarena, S. Poggio, N. Garcia, and A. Osorio Transcriptional repression of gdhA in Escherichia coli is mediated by the Nac protein FEMS Microbiol. Lett. 167 1998 51 56
    • (1998) FEMS Microbiol. Lett. , vol.167 , pp. 51-56
    • Camarena, L.1    Poggio, S.2    Garcia, N.3    Osorio, A.4
  • 8
    • 0022543506 scopus 로고
    • Cloning of the aroP gene and identification of its product in Escherichia coli K-12
    • M.L. Chye, J.R. Guest, and J. Pittard Cloning of the aroP gene and identification of its product in Escherichia coli K-12 J. Bacteriol. 167 1986 749 753
    • (1986) J. Bacteriol. , vol.167 , pp. 749-753
    • Chye, M.L.1    Guest, J.R.2    Pittard, J.3
  • 9
    • 0027469325 scopus 로고
    • Mutational uncoupling of the transcriptional activation function of the TyrR protein of Escherichia coli K-12 from the repression function
    • J. Cui, and R.L. Somerville Mutational uncoupling of the transcriptional activation function of the TyrR protein of Escherichia coli K-12 from the repression function J. Bacteriol. 175 1993 303 306
    • (1993) J. Bacteriol. , vol.175 , pp. 303-306
    • Cui, J.1    Somerville, R.L.2
  • 10
    • 0033037702 scopus 로고    scopus 로고
    • The response to stationary-phase stress conditions in Escherichia coli: Role and regulation of the glutamic acid decarboxylase system
    • D. De Biase, A. Tramonti, F. Bossa, and P. Visca The response to stationary-phase stress conditions in Escherichia coli: role and regulation of the glutamic acid decarboxylase system Mol. Microbiol. 32 1999 1198 1211
    • (1999) Mol. Microbiol. , vol.32 , pp. 1198-1211
    • De Biase, D.1    Tramonti, A.2    Bossa, F.3    Visca, P.4
  • 11
    • 0030470440 scopus 로고    scopus 로고
    • Isolation, overexpression, and biochemical characterization of the two isoforms of glutamic acid decarboxylase from Escherichia coli
    • D. De Biase, A. Tramonti, R.A. John, and F. Bossa Isolation, overexpression, and biochemical characterization of the two isoforms of glutamic acid decarboxylase from Escherichia coli Protein Expr. Purif. 8 1996 430 438
    • (1996) Protein Expr. Purif. , vol.8 , pp. 430-438
    • De Biase, D.1    Tramonti, A.2    John, R.A.3    Bossa, F.4
  • 12
    • 0019982963 scopus 로고
    • Transcription initiation at the tryptophanase promoter of Escherichia coli K-12
    • M.C. Deeley, and C. Yanofsky Transcription initiation at the tryptophanase promoter of Escherichia coli K-12 J. Bacteriol. 151 1982 942 951
    • (1982) J. Bacteriol. , vol.151 , pp. 942-951
    • Deeley, M.C.1    Yanofsky, C.2
  • 13
    • 0027772102 scopus 로고
    • Identification and removal of impediments to biocatalytic synthesis of aromatics from d-glucose: Rate-limiting enzymes in the common pathway of aromatic amino acid biosynthesis
    • K.A. Dell, and J.W. Frost Identification and removal of impediments to biocatalytic synthesis of aromatics from d-glucose: rate-limiting enzymes in the common pathway of aromatic amino acid biosynthesis J. Am. Chem. Soc. 115 1993 11581 11589
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 11581-11589
    • Dell, K.A.1    Frost, J.W.2
  • 14
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • J.L. DeRisi, V.R. Iyer, and P.O. Brown Exploring the metabolic and genetic control of gene expression on a genomic scale Science 278 1997 680 686
    • (1997) Science , vol.278 , pp. 680-686
    • Derisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 19
    • 0039771974 scopus 로고    scopus 로고
    • Transcriptional regulation of the divergent paa catabolic operons for phenylacetic acid degradation in Escherichia coli
    • A. Ferrandez, J.L. Garcia, and E. Diaz Transcriptional regulation of the divergent paa catabolic operons for phenylacetic acid degradation in Escherichia coli J. Biol. Chem. 275 2000 12214 12222
    • (2000) J. Biol. Chem. , vol.275 , pp. 12214-12222
    • Ferrandez, A.1    Garcia, J.L.2    Diaz, E.3
  • 20
    • 0036526245 scopus 로고    scopus 로고
    • Analysis of carbon metabolism in Escherichia coli strains with an inactive phosphotransferase system by (13)C labeling and NMR spectroscopy
    • S. Flores, G. Gosset, N. Flores, A.A. de Graaf, and F. Bolivar Analysis of carbon metabolism in Escherichia coli strains with an inactive phosphotransferase system by (13)C labeling and NMR spectroscopy Metab. Eng. 4 2002 124 137
    • (2002) Metab. Eng. , vol.4 , pp. 124-137
    • Flores, S.1    Gosset, G.2    Flores, N.3    De Graaf, A.A.4    Bolivar, F.5
  • 21
    • 0035047623 scopus 로고    scopus 로고
    • The product of the ybdE gene of the Escherichia coli chromosome is involved in detoxification of silver ions
    • S. Franke, G. Grass, and D.H. Nies The product of the ybdE gene of the Escherichia coli chromosome is involved in detoxification of silver ions Microbiology 147 2001 965 972
    • (2001) Microbiology , vol.147 , pp. 965-972
    • Franke, S.1    Grass, G.2    Nies, D.H.3
  • 22
    • 0034695425 scopus 로고    scopus 로고
    • HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteria
    • K.S. Gajiwala, and S.K. Burley HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteria J. Mol. Biol. 295 2000 605 612
    • (2000) J. Mol. Biol. , vol.295 , pp. 605-612
    • Gajiwala, K.S.1    Burley, S.K.2
  • 23
    • 0037203064 scopus 로고    scopus 로고
    • Process control for enhanced l-phenylalanine production using different recombinant Escherichia coli strains
    • M. Gerigk, R. Bujnicki, E. Ganpo-Nkwenkwa, J. Bongaerts, G. Sprenger, and R. Takors Process control for enhanced l-phenylalanine production using different recombinant Escherichia coli strains Biotechnol. Bioeng. 80 2002 746 754
    • (2002) Biotechnol. Bioeng. , vol.80 , pp. 746-754
    • Gerigk, M.1    Bujnicki, R.2    Ganpo-Nkwenkwa, E.3    Bongaerts, J.4    Sprenger, G.5    Takors, R.6
  • 24
    • 0029764209 scopus 로고    scopus 로고
    • A direct comparison of approaches for increasing carbon flow to aromatic biosynthesis in Escherichia coli
    • G. Gosset, J. Yong-Xiao, and A. Berry A direct comparison of approaches for increasing carbon flow to aromatic biosynthesis in Escherichia coli J. Ind. Microbiol. 17 1996 47 52
    • (1996) J. Ind. Microbiol. , vol.17 , pp. 47-52
    • Gosset, G.1    Yong-Xiao, J.2    Berry, A.3
  • 25
    • 0003171945 scopus 로고    scopus 로고
    • Developing an l-phenylalanine process
    • N.J. Grinter Developing an l-phenylalanine process ChemTech. (July) 1998 33 35
    • (1998) ChemTech. (July) , pp. 33-35
    • Grinter, N.J.1
  • 26
    • 0025957686 scopus 로고
    • Cloning, nucleotide sequence, and characterization of mtr, the structural gene for a tryptophan-specific permease of Escherichia coli K-12
    • V.M. Heatwole, and R.L. Somerville Cloning, nucleotide sequence, and characterization of mtr, the structural gene for a tryptophan-specific permease of Escherichia coli K-12 J. Bacteriol. 173 1991 108 115
    • (1991) J. Bacteriol. , vol.173 , pp. 108-115
    • Heatwole, V.M.1    Somerville, R.L.2
  • 27
    • 0036198628 scopus 로고    scopus 로고
    • Recent insights into the general stress response regulatory network in Escherichia coli
    • R. Hengge-Aronis Recent insights into the general stress response regulatory network in Escherichia coli J. Mol. Microbiol. Biotechnol. 4 2002 341 346
    • (2002) J. Mol. Microbiol. Biotechnol. , vol.4 , pp. 341-346
    • Hengge-Aronis, R.1
  • 29
    • 0025134246 scopus 로고
    • Nucleotide sequence of the aroP gene encoding the general aromatic amino acid transport protein of Escherichia coli K-12: Homology with yeast transport proteins
    • N. Honore, and S.T. Cole Nucleotide sequence of the aroP gene encoding the general aromatic amino acid transport protein of Escherichia coli K-12: homology with yeast transport proteins Nucleic Acids Res. 18 1990 653
    • (1990) Nucleic Acids Res. , vol.18 , pp. 653
    • Honore, N.1    Cole, S.T.2
  • 30
    • 0037174983 scopus 로고    scopus 로고
    • Global gene expression profiling in Escherichia coli K-12. the effects of leucine-responsive regulatory protein
    • S.P. Hung, P. Baldi, and G.W. Hatfield Global gene expression profiling in Escherichia coli K-12. The effects of leucine-responsive regulatory protein J. Biol. Chem. 277 2002 40309 40323
    • (2002) J. Biol. Chem. , vol.277 , pp. 40309-40323
    • Hung, S.P.1    Baldi, P.2    Hatfield, G.W.3
  • 32
    • 0033203177 scopus 로고    scopus 로고
    • Transcriptional regulation of tyrosine phenol-lyase gene mediated through TyrR and cAMP receptor protein
    • T. Katayama, H. Suzuki, K. Yamamoto, and H. Kumagai Transcriptional regulation of tyrosine phenol-lyase gene mediated through TyrR and cAMP receptor protein Biosci. Biotechnol. Biochem. 63 1999 1823 1827
    • (1999) Biosci. Biotechnol. Biochem. , vol.63 , pp. 1823-1827
    • Katayama, T.1    Suzuki, H.2    Yamamoto, K.3    Kumagai, H.4
  • 33
    • 0142172058 scopus 로고    scopus 로고
    • Escherichia coli spotted double-strand DNA microarrays: RNA extraction, labeling, hybridization, quality control, and data management
    • A.B. Khodursky, J.A. Bernstein, B.J. Peter, V. Rhodius, V.F. Wendisch, and D.P. Zimmer Escherichia coli spotted double-strand DNA microarrays: RNA extraction, labeling, hybridization, quality control, and data management Methods Mol. Biol. 224 2003 61 78
    • (2003) Methods Mol. Biol. , vol.224 , pp. 61-78
    • Khodursky, A.B.1    Bernstein, J.A.2    Peter, B.J.3    Rhodius, V.4    Wendisch, V.F.5    Zimmer, D.P.6
  • 34
    • 0034710992 scopus 로고    scopus 로고
    • DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli
    • A.B. Khodursky, B.J. Peter, N.R. Cozzarelli, D. Botstein, P.O. Brown, and C. Yanofsky DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli Proc. Natl. Acad. Sci. U.S.A. 97 2000 12170 12175
    • (2000) Proc. Natl. Acad. Sci. U.S.A. , vol.97 , pp. 12170-12175
    • Khodursky, A.B.1    Peter, B.J.2    Cozzarelli, N.R.3    Botstein, D.4    Brown, P.O.5    Yanofsky, C.6
  • 35
    • 0025860534 scopus 로고
    • Physiologically motivated strategies for control of the fed-batch cultivation of recombinant Escherichia coli for phenylalanine production
    • K.B. Konstantinov, N. Nishio, T. Seki, and T. Yoshida Physiologically motivated strategies for control of the fed-batch cultivation of recombinant Escherichia coli for phenylalanine production J. Ferm. Bioeng. 71 1991 350 355
    • (1991) J. Ferm. Bioeng. , vol.71 , pp. 350-355
    • Konstantinov, K.B.1    Nishio, N.2    Seki, T.3    Yoshida, T.4
  • 36
    • 0347285394 scopus 로고    scopus 로고
    • Identification of the LIV-I/LS system as the third phenylalanine transporter in Escherichia coli K-12
    • T. Koyanagi, T. Katayama, H. Suzuki, and H. Kumagai Identification of the LIV-I/LS system as the third phenylalanine transporter in Escherichia coli K-12 J. Bacteriol. 186 2004 343 350
    • (2004) J. Bacteriol. , vol.186 , pp. 343-350
    • Koyanagi, T.1    Katayama, T.2    Suzuki, H.3    Kumagai, H.4
  • 39
    • 0022392670 scopus 로고
    • Translation activates the paused transcription complex and restores transcription of the trp operon leader region
    • R. Landick, J. Carey, and C. Yanofsky Translation activates the paused transcription complex and restores transcription of the trp operon leader region Proc. Natl. Acad. Sci. U.S.A. 82 1985 4663 4667
    • (1985) Proc. Natl. Acad. Sci. U.S.A. , vol.82 , pp. 4663-4667
    • Landick, R.1    Carey, J.2    Yanofsky, C.3
  • 40
    • 0027987492 scopus 로고
    • Regulation of aroL expression by TyrR protein and Trp repressor in Escherichia coli K-12
    • B. Lawley, and A.J. Pittard Regulation of aroL expression by TyrR protein and Trp repressor in Escherichia coli K-12 J. Bacteriol. 176 1994 6921 6930
    • (1994) J. Bacteriol. , vol.176 , pp. 6921-6930
    • Lawley, B.1    Pittard, A.J.2
  • 41
    • 0036068774 scopus 로고    scopus 로고
    • LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli
    • D. Lehnen, C. Blumer, T. Polen, B. Wackwitz, V.F. Wendisch, and G. Unden LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli Mol. Microbiol. 45 2002 521 532
    • (2002) Mol. Microbiol. , vol.45 , pp. 521-532
    • Lehnen, D.1    Blumer, C.2    Polen, T.3    Wackwitz, B.4    Wendisch, V.F.5    Unden, G.6
  • 42
    • 0034351984 scopus 로고    scopus 로고
    • Fluorescence and 19F NMR evidence that phenylalanine, 3-l-fluorophenylalanine and 4-l-fluorophenylalanine bind to the l-leucine specific receptor of Escherichia coli
    • L.A. Luck, and C. Johnson Fluorescence and 19F NMR evidence that phenylalanine, 3-l-fluorophenylalanine and 4-l-fluorophenylalanine bind to the l-leucine specific receptor of Escherichia coli Protein Sci. 9 2000 2573 2576
    • (2000) Protein Sci. , vol.9 , pp. 2573-2576
    • Luck, L.A.1    Johnson, C.2
  • 43
    • 0024474711 scopus 로고
    • Stereochemical effects of l-tryptophan and its analogues on trp repressor's affinity for operator-DNA
    • R.Q. Marmorstein, and P.B. Sigler Stereochemical effects of l-tryptophan and its analogues on trp repressor's affinity for operator-DNA J. Biol. Chem. 264 1989 9149 9154
    • (1989) J. Biol. Chem. , vol.264 , pp. 9149-9154
    • Marmorstein, R.Q.1    Sigler, P.B.2
  • 44
    • 0025945912 scopus 로고
    • Deletion of pgi alters tryptophan biosynthesis in a genetically engineered strain of Escherichia coli
    • D. Mascarenhas, D.J. Ashworth, and C.S. Chen Deletion of pgi alters tryptophan biosynthesis in a genetically engineered strain of Escherichia coli Appl. Environ. Microbiol. 57 1991 2995 2999
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 2995-2999
    • Mascarenhas, D.1    Ashworth, D.J.2    Chen, C.S.3
  • 45
    • 0036843687 scopus 로고    scopus 로고
    • Escherichia coli gene expression responsive to levels of the response regulator EvgA
    • N. Masuda, and G.M. Church Escherichia coli gene expression responsive to levels of the response regulator EvgA J. Bacteriol. 184 2002 6225 6234
    • (2002) J. Bacteriol. , vol.184 , pp. 6225-6234
    • Masuda, N.1    Church, G.M.2
  • 46
    • 0038349356 scopus 로고    scopus 로고
    • Regulatory network of acid resistance genes in Escherichia coli
    • N. Masuda, and G.M. Church Regulatory network of acid resistance genes in Escherichia coli Mol. Microbiol. 48 2003 699 712
    • (2003) Mol. Microbiol. , vol.48 , pp. 699-712
    • Masuda, N.1    Church, G.M.2
  • 47
    • 0030447842 scopus 로고    scopus 로고
    • Lrp is a direct repressor of the dad operon in Escherichia coli
    • E. Mathew, J. Zhi, and M. Freundlich Lrp is a direct repressor of the dad operon in Escherichia coli J. Bacteriol. 178 1996 7234 7240
    • (1996) J. Bacteriol. , vol.178 , pp. 7234-7240
    • Mathew, E.1    Zhi, J.2    Freundlich, M.3
  • 48
    • 0000146510 scopus 로고    scopus 로고
    • Amino acids as carbon sources
    • F.C. Neidhardt R. Curtiss III J.L. Ingraham E.C.C. Lin K.B. Low B. Magasanik W.S. Reznikoff M. Riley M. Schaechter H.E. Umbarger ASM Press Washington, DC
    • E. McFall, and E.B. Newman Amino acids as carbon sources F.C. Neidhardt R. Curtiss III J.L. Ingraham E.C.C. Lin K.B. Low B. Magasanik W.S. Reznikoff M. Riley M. Schaechter H.E. Umbarger Escherichia coli and Salmonella, Cellular and Molecular Biology 1996 ASM Press Washington, DC 358 379
    • (1996) Escherichia Coli and Salmonella, Cellular and Molecular Biology , pp. 358-379
    • McFall, E.1    Newman, E.B.2
  • 50
    • 0003842951 scopus 로고
    • Cold Spring Harbor Laboratory Press Cold Spring Harbor, New York
    • J.H. Miller A Short Course in Bacterial Genetics 1992 Cold Spring Harbor Laboratory Press Cold Spring Harbor, New York
    • (1992) A Short Course in Bacterial Genetics
    • Miller, J.H.1
  • 52
    • 0033813832 scopus 로고    scopus 로고
    • Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12
    • G.P. Munson, D.L. Lam, F.W. Outten, and T.V. O'Halloran Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12 J. Bacteriol. 182 2000 5864 5871
    • (2000) J. Bacteriol. , vol.182 , pp. 5864-5871
    • Munson, G.P.1    Lam, D.L.2    Outten, F.W.3    O'Halloran, T.V.4
  • 53
    • 0000645634 scopus 로고    scopus 로고
    • The leucine/Lrp regulon
    • Neidhardt, F.C., Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., Umbarger, H.E. (Eds.), American Society of Microbiology
    • Newman, E.B., Lin, R.T., D'Ari, R., 1996. The leucine/Lrp regulon. In: Neidhardt, F.C., Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., Umbarger, H.E. (Eds.), Escherichia coli and Salmonella, Cellular and Molecular Biology, American Society of Microbiology, pp. 1513-1525.
    • (1996) Escherichia coli and Salmonella, Cellular and Molecular Biology , pp. 1513-1525
    • Newman, E.B.1    Lin, R.T.2    D'Ari, R.3
  • 55
    • 0035903128 scopus 로고    scopus 로고
    • The independent cue and cus systems confer copper tolerance during aerobic and anaerobic growth in Escherichia coli
    • F.W. Outten, D.L. Huffman, J.A. Hale, and T.V. O'Halloran The independent cue and cus systems confer copper tolerance during aerobic and anaerobic growth in Escherichia coli J. Biol. Chem. 276 2001 30670 30677
    • (2001) J. Biol. Chem. , vol.276 , pp. 30670-30677
    • Outten, F.W.1    Huffman, D.L.2    Hale, J.A.3    O'Halloran, T.V.4
  • 56
    • 0028036558 scopus 로고
    • Engineering of Escherichia coli central metabolism for aromatic metabolite production with near theoretical yield
    • R. Patnaik, and J.C. Liao Engineering of Escherichia coli central metabolism for aromatic metabolite production with near theoretical yield Appl. Environ. Microbiol. 60 1994 3903 3908
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 3903-3908
    • Patnaik, R.1    Liao, J.C.2
  • 57
    • 0029294180 scopus 로고
    • Pathway engineering for production of aromatics in Escherichia coli: Confirmation of stoichiometric analysis by independent modulation of AroG, TktA and Pps activities
    • R. Patnaik, R. Spitzer, and J.C. Liao Pathway engineering for production of aromatics in Escherichia coli: confirmation of stoichiometric analysis by independent modulation of AroG, TktA and Pps activities Biotechnol. Bioeng. 46 1995 361 370
    • (1995) Biotechnol. Bioeng. , vol.46 , pp. 361-370
    • Patnaik, R.1    Spitzer, R.2    Liao, J.C.3
  • 58
    • 0034604396 scopus 로고    scopus 로고
    • Microbial genome analyses: Comparative transport capabilities in 18 prokaryotes
    • I.T. Paulsen, L. Nguyen, M.K. Sliwinski, R. Rabus, and M.H. Saier Jr. Microbial genome analyses: comparative transport capabilities in 18 prokaryotes J. Mol. Biol. 301 2000 75 100
    • (2000) J. Mol. Biol. , vol.301 , pp. 75-100
    • Paulsen, I.T.1    Nguyen, L.2    Sliwinski, M.K.3    Rabus, R.4    Saier Jr., M.H.5
  • 59
    • 0025766783 scopus 로고
    • Cloning and sequencing of the pheP gene, which encodes the phenylalanine-specific transport system of Escherichia coli
    • J. Pi, P.J. Wookey, and A.J. Pittard Cloning and sequencing of the pheP gene, which encodes the phenylalanine-specific transport system of Escherichia coli J. Bacteriol. 173 1991 3622 3629
    • (1991) J. Bacteriol. , vol.173 , pp. 3622-3629
    • Pi, J.1    Wookey, P.J.2    Pittard, A.J.3
  • 60
    • 0000605871 scopus 로고    scopus 로고
    • Biosynthesis of aromatic amino acids
    • F.C. Neidhardt R. Curtiss III J.L. Ingraham E.C.C. Lin K.B. Low B. Magasanik W.S. Reznikoff M. Riley M. Schaechter H.E. Umbarger ASM Press Washington, DC
    • A.J. Pittard Biosynthesis of aromatic amino acids F.C. Neidhardt R. Curtiss III J.L. Ingraham E.C.C. Lin K.B. Low B. Magasanik W.S. Reznikoff M. Riley M. Schaechter H.E. Umbarger Escherichia coli and Salmonella, Cellular and Molecular Biology 1996 ASM Press Washington, DC 458 484
    • (1996) Escherichia Coli and Salmonella, Cellular and Molecular Biology , pp. 458-484
    • Pittard, A.J.1
  • 61
    • 0025740385 scopus 로고
    • TyrR protein of Escherichia coli and its role as repressor and activator
    • A.J. Pittard, and B.E. Davidson TyrR protein of Escherichia coli and its role as repressor and activator Mol. Microbiol. 5 1991 1585 1592
    • (1991) Mol. Microbiol. , vol.5 , pp. 1585-1592
    • Pittard, A.J.1    Davidson, B.E.2
  • 62
    • 0030203778 scopus 로고    scopus 로고
    • The various strategies within the TyrR regulation of Escherichia coli to modulate gene expression
    • J. Pittard The various strategies within the TyrR regulation of Escherichia coli to modulate gene expression Genes Cells 1 1996 717 725
    • (1996) Genes Cells , vol.1 , pp. 717-725
    • Pittard, J.1
  • 63
    • 4344667785 scopus 로고    scopus 로고
    • Genomewide expression analysis in amino acid-producing bacteria using DNA microarrays
    • T. Polen, and V.F. Wendisch Genomewide expression analysis in amino acid-producing bacteria using DNA microarrays Appl. Biochem. Biotechnol. 118 2004 215 232
    • (2004) Appl. Biochem. Biotechnol. , vol.118 , pp. 215-232
    • Polen, T.1    Wendisch, V.F.2
  • 64
    • 0037338332 scopus 로고    scopus 로고
    • DNA microarray analyses of the long-term adaptive response of Escherichia coli to acetate and propionate
    • T. Polen, D. Rittmann, V.F. Wendisch, and H. Sahm DNA microarray analyses of the long-term adaptive response of Escherichia coli to acetate and propionate Appl. Environ. Microbiol. 69 2003 1759 1774
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1759-1774
    • Polen, T.1    Rittmann, D.2    Wendisch, V.F.3    Sahm, H.4
  • 65
    • 0024255488 scopus 로고
    • Mutational analysis of the catalytic and feedback sites of the tryptophan-sensitive 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase of Escherichia coli
    • J.M. Ray, C. Yanofsky, and R. Bauerle Mutational analysis of the catalytic and feedback sites of the tryptophan-sensitive 3-deoxy-d-arabino- heptulosonate-7-phosphate synthase of Escherichia coli J. Bacteriol. 170 1988 5500 5506
    • (1988) J. Bacteriol. , vol.170 , pp. 5500-5506
    • Ray, J.M.1    Yanofsky, C.2    Bauerle, R.3
  • 66
    • 0036407715 scopus 로고    scopus 로고
    • Impact of genomic technologies on studies of bacterial gene expression
    • V. Rhodius, T.K. Van Dyk, C. Gross, and R.A. LaRossa Impact of genomic technologies on studies of bacterial gene expression Ann. Rev. Microbiol. 56 2002 599 624
    • (2002) Ann. Rev. Microbiol. , vol.56 , pp. 599-624
    • Rhodius, V.1    Van Dyk, T.K.2    Gross, C.3    Larossa, R.A.4
  • 69
    • 0025810777 scopus 로고
    • A new family of integral membrane proteins involved in transport of aromatic amino acids in Escherichia coli
    • J.P. Sarsero, P.J. Wookey, P. Gollnick, C. Yanofsky, and A.J. Pittard A new family of integral membrane proteins involved in transport of aromatic amino acids in Escherichia coli J. Bacteriol. 173 1991 3231 3234
    • (1991) J. Bacteriol. , vol.173 , pp. 3231-3234
    • Sarsero, J.P.1    Wookey, P.J.2    Gollnick, P.3    Yanofsky, C.4    Pittard, A.J.5
  • 70
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • M. Schena, D. Shalon, R.W. Davis, and P.O. Brown Quantitative monitoring of gene expression patterns with a complementary DNA microarray Science 270 1995 467 470
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 71
    • 0035788432 scopus 로고    scopus 로고
    • An activator of glutamate decarboxylase genes regulates the expression of enteropathogenic Escherichia coli virulence genes through control of the plasmid-encoded regulator
    • S. Shin, M.P. Castanie-Cornet, J.W. Foster, J.A. Crawford, C. Brinkley, and J.B. Kaper An activator of glutamate decarboxylase genes regulates the expression of enteropathogenic Escherichia coli virulence genes through control of the plasmid-encoded regulator Per. Mol. Microbiol. 41 2001 1133 1150
    • (2001) Per. Mol. Microbiol. , vol.41 , pp. 1133-1150
    • Shin, S.1    Castanie-Cornet, M.P.2    Foster, J.W.3    Crawford, J.A.4    Brinkley, C.5    Kaper, J.B.6
  • 72
    • 0031806146 scopus 로고    scopus 로고
    • Acid stress, anaerobiosis and gadCB: Lessons from Lactococcus lactis and Escherichia coli
    • P.L. Small, and S.R. Waterman Acid stress, anaerobiosis and gadCB: lessons from Lactococcus lactis and Escherichia coli Trends Microbiol. 6 1998 214 216
    • (1998) Trends Microbiol. , vol.6 , pp. 214-216
    • Small, P.L.1    Waterman, S.R.2
  • 73
    • 0026641173 scopus 로고
    • Escherichia coli has two homologous glutamate decarboxylase genes that map to distinct loci
    • D.K. Smith, T. Kassam, B. Singh, and J.F. Elliott Escherichia coli has two homologous glutamate decarboxylase genes that map to distinct loci J. Bacteriol. 174 1992 5820 5826
    • (1992) J. Bacteriol. , vol.174 , pp. 5820-5826
    • Smith, D.K.1    Kassam, T.2    Singh, B.3    Elliott, J.F.4
  • 74
    • 0028167544 scopus 로고
    • Reconstruction of glucose uptake and phosphorylation in a glucose-negative mutant of Escherichia coli by using Zymomonas mobilis genes encoding the glucose facilitator protein and glucokinase
    • J.L. Snoep, N. Arfman, L.P. Yomano, R.K. Fliege, T. Conway, and L.O. Ingram Reconstruction of glucose uptake and phosphorylation in a glucose-negative mutant of Escherichia coli by using Zymomonas mobilis genes encoding the glucose facilitator protein and glucokinase J. Bacteriol. 176 1994 2133 2135
    • (1994) J. Bacteriol. , vol.176 , pp. 2133-2135
    • Snoep, J.L.1    Arfman, N.2    Yomano, L.P.3    Fliege, R.K.4    Conway, T.5    Ingram, L.O.6
  • 77
    • 0016258213 scopus 로고
    • Negative chemotaxis in Escherichia coli
    • W.W. Tso, and J. Adler Negative chemotaxis in Escherichia coli J. Bacteriol. 118 1974 560 576
    • (1974) J. Bacteriol. , vol.118 , pp. 560-576
    • Tso, W.W.1    Adler, J.2
  • 78
    • 0014137932 scopus 로고
    • Chromatography of 3-deoxy-d-arabinoheptulosonic acid-7-phosphate synthetase (trp) on diethylaminoethyl cellulose: A correction
    • B.J. Wallace, and J. Pittard Chromatography of 3-deoxy-d- arabinoheptulosonic acid-7-phosphate synthetase (trp) on diethylaminoethyl cellulose: a correction J. Bacteriol. 94 1967 1279 1280
    • (1967) J. Bacteriol. , vol.94 , pp. 1279-1280
    • Wallace, B.J.1    Pittard, J.2
  • 79
    • 0034966692 scopus 로고    scopus 로고
    • Indole can act as an extracellular signal in Escherichia coli
    • D. Wang, X. Ding, and P.N. Rather Indole can act as an extracellular signal in Escherichia coli J. Bacteriol. 183 2001 4210 4216
    • (2001) J. Bacteriol. , vol.183 , pp. 4210-4216
    • Wang, D.1    Ding, X.2    Rather, P.N.3
  • 81
    • 0041429503 scopus 로고    scopus 로고
    • Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays
    • V.F. Wendisch Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays J. Biotechnol. 104 2003 273 285
    • (2003) J. Biotechnol. , vol.104 , pp. 273-285
    • Wendisch, V.F.1
  • 82
    • 0035869262 scopus 로고    scopus 로고
    • Isolation of Escherichia coli mRNA and comparison of expression using mRNA and total RNA on DNA microarrays
    • V.F. Wendisch, D.P. Zimmer, A. Khodursky, B. Peter, N. Cozzarelli, and S. Kustu Isolation of Escherichia coli mRNA and comparison of expression using mRNA and total RNA on DNA microarrays Anal. Biochem. 290 2001 205 213
    • (2001) Anal. Biochem. , vol.290 , pp. 205-213
    • Wendisch, V.F.1    Zimmer, D.P.2    Khodursky, A.3    Peter, B.4    Cozzarelli, N.5    Kustu, S.6
  • 83
    • 0032536881 scopus 로고    scopus 로고
    • Cloning and analysis of the shiA gene, which encodes the shikimate transport system of Escherichia coli K-12
    • M.J. Whipp, H. Camakaris, and A.J. Pittard Cloning and analysis of the shiA gene, which encodes the shikimate transport system of Escherichia coli K-12 Gene 209 1998 185 192
    • (1998) Gene , vol.209 , pp. 185-192
    • Whipp, M.J.1    Camakaris, H.2    Pittard, A.J.3
  • 84
    • 0029144438 scopus 로고
    • Evidence for two aromatic amino acid-binding sites, one ATP-dependent and the other ATP-independent, in the Escherichia coli regulatory protein TyrR
    • T.J. Wilson, V.P. Argaet, G.J. Howlett, and B.E. Davidson Evidence for two aromatic amino acid-binding sites, one ATP-dependent and the other ATP-independent, in the Escherichia coli regulatory protein TyrR Mol. Microbiol. 17 1995 483 492
    • (1995) Mol. Microbiol. , vol.17 , pp. 483-492
    • Wilson, T.J.1    Argaet, V.P.2    Howlett, G.J.3    Davidson, B.E.4
  • 85
    • 0024095010 scopus 로고
    • DNA sequence of the gene (tyrP) encoding the tyrosine-specific transport system of Escherichia coli
    • P.J. Wookey, and A.J. Pittard DNA sequence of the gene (tyrP) encoding the tyrosine-specific transport system of Escherichia coli J. Bacteriol. 170 1988 4946 4949
    • (1988) J. Bacteriol. , vol.170 , pp. 4946-4949
    • Wookey, P.J.1    Pittard, A.J.2
  • 86
    • 0021224006 scopus 로고
    • Cloning of the tyrP gene and further characterization of the tyrosine-specific transport system in Escherichia coli K-12
    • P.J. Wookey, J. Pittard, S.M. Forrest, and B.E. Davidson Cloning of the tyrP gene and further characterization of the tyrosine-specific transport system in Escherichia coli K-12 J. Bacteriol. 160 1984 169 174
    • (1984) J. Bacteriol. , vol.160 , pp. 169-174
    • Wookey, P.J.1    Pittard, J.2    Forrest, S.M.3    Davidson, B.E.4
  • 87
    • 0036051168 scopus 로고    scopus 로고
    • Molecular analysis of tyrosine-and phenylalanine-mediated repression of the tyrB promoter by the TyrR protein of Escherichia coli
    • J. Yang, H. Camakaris, and J. Pittard Molecular analysis of tyrosine-and phenylalanine-mediated repression of the tyrB promoter by the TyrR protein of Escherichia coli Mol. Microbiol. 45 2002 1407 1419
    • (2002) Mol. Microbiol. , vol.45 , pp. 1407-1419
    • Yang, J.1    Camakaris, H.2    Pittard, J.3
  • 88
    • 0027408011 scopus 로고
    • A genetic analysis of various functions of the TyrR protein of Escherichia coli
    • J. Yang, S. Ganesan, J. Sarsero, and A.J. Pittard A genetic analysis of various functions of the TyrR protein of Escherichia coli J. Bacteriol. 175 1993 1767 1776
    • (1993) J. Bacteriol. , vol.175 , pp. 1767-1776
    • Yang, J.1    Ganesan, S.2    Sarsero, J.3    Pittard, A.J.4
  • 89
    • 0026006958 scopus 로고
    • Physiological studies of tryptophan transport and tryptophanase operon induction in Escherichia coli
    • C. Yanofsky, V. Horn, and P. Gollnick Physiological studies of tryptophan transport and tryptophanase operon induction in Escherichia coli J. Bacteriol. 173 1991 6009 6017
    • (1991) J. Bacteriol. , vol.173 , pp. 6009-6017
    • Yanofsky, C.1    Horn, V.2    Gollnick, P.3
  • 91
    • 0037473189 scopus 로고    scopus 로고
    • Combined transcriptome and proteome analysis of Escherichia coli during high cell density culture
    • S.H. Yoon, M.J. Han, S.Y. Lee, K.J. Jeong, and J.S. Yoo Combined transcriptome and proteome analysis of Escherichia coli during high cell density culture Biotechnol. Bioeng. 81 2003 753 767
    • (2003) Biotechnol. Bioeng. , vol.81 , pp. 753-767
    • Yoon, S.H.1    Han, M.J.2    Lee, S.Y.3    Jeong, K.J.4    Yoo, J.S.5
  • 92
    • 0033877256 scopus 로고    scopus 로고
    • Glucose transporter mutants of Escherichia coli K-12 with changes in substrate recognition of IICB(Glc) and induction behavior of the ptsG gene
    • T. Zeppenfeld, C. Larisch, J.W. Lengeler, and K. Jahreis Glucose transporter mutants of Escherichia coli K-12 with changes in substrate recognition of IICB(Glc) and induction behavior of the ptsG gene J. Bacteriol. 182 2000 4443 4452
    • (2000) J. Bacteriol. , vol.182 , pp. 4443-4452
    • Zeppenfeld, T.1    Larisch, C.2    Lengeler, J.W.3    Jahreis, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.