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Volumn 3, Issue 6, 2002, Pages

Phylogenetic analysis of the human basic helix-loop-helix proteins

Author keywords

Additional Data File; bHLH Gene; bHLH Protein; Mouse Gene; Orthology Relationship

Indexed keywords

AVIAN PROTEIN; HELIX LOOP HELIX PROTEIN; HELMINTH PROTEIN; INSECT PROTEIN; PROTEIN;

EID: 18744421788     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2002-3-6-research0030     Document Type: Article
Times cited : (176)

References (82)
  • 1
    • 0027738464 scopus 로고
    • The MyoD family and myogenesis: redundancy, networks, and thresholds
    • PID: 8269506, COI: 1:CAS:528:DyaK2cXntl2mtw%3D%3D
    • Weintraub H: The MyoD family and myogenesis: redundancy, networks, and thresholds. Cell. 1993, 75: 1241-1244. DOI: 10.1016/0092-8674(93)90610-3
    • (1993) Cell , vol.75 , pp. 1241-1244
    • Weintraub, H.1
  • 2
    • 0027141207 scopus 로고
    • HLH proteins, fly neurogenesis, and vertebrate myogenesis
    • PID: 8252617, COI: 1:CAS:528:DyaK2cXislOntw%3D%3D
    • Jan YN, Jan LY: HLH proteins, fly neurogenesis, and vertebrate myogenesis. Cell. 1993, 75: 827-830. DOI: 10.1016/0092-8674(93)90525-U
    • (1993) Cell , vol.75 , pp. 827-830
    • Jan, Y.N.1    Jan, L.Y.2
  • 3
    • 0033883069 scopus 로고    scopus 로고
    • Doing the MATH: is the mouse a good model for fly development?
    • PID: 10921900, COI: 1:CAS:528:DC%2BD3cXls1yqtr4%3D
    • Hassan BA, Bellen HJ: Doing the MATH: is the mouse a good model for fly development?. Genes Dev. 2000, 14: 1852-1865.
    • (2000) Genes Dev , vol.14 , pp. 1852-1865
    • Hassan, B.A.1    Bellen, H.J.2
  • 4
    • 0033980393 scopus 로고    scopus 로고
    • Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms
    • PID: 10611221, COI: 1:CAS:528:DC%2BD3cXjtVKnsg%3D%3D
    • Massari ME, Murre C: Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms. Mol Cell Biol. 2000, 20: 429-440. 10.1128/MCB.20.2.429-440.2000. DOI: 10.1128/MCB.20.2.429-440.2000
    • (2000) Mol Cell Biol , vol.20 , pp. 429-440
    • Massari, M.E.1    Murre, C.2
  • 5
    • 0005279193 scopus 로고    scopus 로고
    • The evolution of neural basic helix-loop-helix proteins
    • COI: 1:CAS:528:DC%2BD3MXovFantbg%3D
    • Vervoort M, Ledent V: The evolution of neural basic helix-loop-helix proteins. The Scientific World. 2001, 1: 396-426. DOI: 10.1100/tsw.2001.68
    • (2001) The Scientific World , vol.1 , pp. 396-426
    • Vervoort, M.1    Ledent, V.2
  • 6
    • 0031008399 scopus 로고    scopus 로고
    • A natural classification of the basic helix-loop-helix class of transcription factors
    • PID: 9144210, COI: 1:CAS:528:DyaK2sXjtlalurk%3D
    • Atchley WR, Fitch WM: A natural classification of the basic helix-loop-helix class of transcription factors. Proc Natl Acad Sci USA. 1997, 94: 5172-5176. 10.1073/pnas.94.10.5172. DOI: 10.1073/pnas.94.10.5172
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 5172-5176
    • Atchley, W.R.1    Fitch, W.M.2
  • 7
    • 0034164664 scopus 로고    scopus 로고
    • Saccharomyces cerevisiaebasic helix-loop-helix proteins regulate diverse biological processes
    • PID: 10710415, COI: 1:CAS:528:DC%2BD3cXitlGnurk%3D
    • Robinson KA, Lopez JM: Saccharomyces cerevisiae basic helix-loop-helix proteins regulate diverse biological processes. Nucleic Acids Res. 2000, 28: 1499-1505. 10.1093/nar/28.7.1499. DOI: 10.1093/nar/28.7.1499
    • (2000) Nucleic Acids Res , vol.28 , pp. 1499-1505
    • Robinson, K.A.1    Lopez, J.M.2
  • 8
    • 0035001937 scopus 로고    scopus 로고
    • The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis
    • PID: 11337472, COI: 1:CAS:528:DC%2BD3MXjs1Wmuro%3D
    • Ledent V, Vervoort M: The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis. Genome Res. 2001, 11: 754-770. 10.1101/gr.177001. DOI: 10.1101/gr.177001
    • (2001) Genome Res , vol.11 , pp. 754-770
    • Ledent, V.1    Vervoort, M.2
  • 9
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: a platform for investigating biology
    • The C. elegans Sequencing Consortium: Genome sequence of the nematode C. elegans: a platform for investigating biology. Science. 1998, 282: 2012-2018. 10.1126/science.282.5396.2012. DOI: 10.1126/science.282.5396.2012
    • (1998) Science , vol.282 , pp. 2012-2018
  • 11
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • The International Human Genome Sequencing Consortium: Initial sequencing and analysis of the human genome. Nature. 2001, 409: 860-921. 10.1086/172716. DOI: 10.1038/35057062
    • (2001) Nature , vol.409 , pp. 860-921
  • 12
    • 0032486191 scopus 로고    scopus 로고
    • Shotgun sequencing of the human genome
    • PID: 9644018, COI: 1:CAS:528:DyaK1cXjsFOqsbw%3D
    • Venter JC, Adams MD, Sutton GG, Kerlavage AR, Smith HO, Hunkapiller M: Shotgun sequencing of the human genome. Science. 1998, 280: 1540-1542. 10.1126/science.280.5369.1540. DOI: 10.1126/science.280.5369.1540
    • (1998) Science , vol.280 , pp. 1540-1542
    • Venter, J.C.1    Adams, M.D.2    Sutton, G.G.3    Kerlavage, A.R.4    Smith, H.O.5    Hunkapiller, M.6
  • 13
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • PID: 9254694, COI: 1:CAS:528:DyaK2sXlvFyhu7w%3D
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25: 3389-3402. 10.1093/nar/25.17.3389. DOI: 10.1093/nar/25.17.3389
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 14
    • 0033957469 scopus 로고    scopus 로고
    • SMART: a web-based tool for the study of genetically mobile domains
    • PID: 10592234, COI: 1:CAS:528:DC%2BD3cXhvVKjt78%3D
    • Schultz J, Copley RR, Doerks T, Ponting CP, Bork P: SMART: a web-based tool for the study of genetically mobile domains. Nucleic Acids Res. 2000, 28: 231-234. 10.1093/nar/28.1.231. DOI: 10.1093/nar/28.1.231
    • (2000) Nucleic Acids Res , vol.28 , pp. 231-234
    • Schultz, J.1    Copley, R.R.2    Doerks, T.3    Ponting, C.P.4    Bork, P.5
  • 15
    • 0032568655 scopus 로고    scopus 로고
    • SMART, a simple modular architecture research tool: identification of signaling domains
    • PID: 9600884, COI: 1:CAS:528:DyaK1cXjtlKhur8%3D
    • Schultz J, Milpetz F, Bork P, Ponting CP: SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA. 1998, 95: 5857-5864. 10.1073/pnas.95.11.5857. DOI: 10.1073/pnas.95.11.5857
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 5857-5864
    • Schultz, J.1    Milpetz, F.2    Bork, P.3    Ponting, C.P.4
  • 16
  • 17
    • 0014800108 scopus 로고
    • Distinguishing homologous from analogous proteins
    • PID: 5449325, COI: 1:CAS:528:DyaE3MXkvFyisw%3D%3D
    • Fitch WM: Distinguishing homologous from analogous proteins. Syst Zool. 1970, 19: 99-113. DOI: 10.2307/2412448
    • (1970) Syst Zool , vol.19 , pp. 99-113
    • Fitch, W.M.1
  • 18
    • 0030023247 scopus 로고    scopus 로고
    • Determining divergence times of the major kingdoms of living organisms with a protein clock
    • PID: 8560259, COI: 1:CAS:528:DyaK28XmvFyktg%3D%3D
    • Doolittle RF, Feng DF, Tsang S, Cho G, Little E: Determining divergence times of the major kingdoms of living organisms with a protein clock. Science. 1996, 271: 470-477. DOI: 10.1126/science.271.5248.470
    • (1996) Science , vol.271 , pp. 470-477
    • Doolittle, R.F.1    Feng, D.F.2    Tsang, S.3    Cho, G.4    Little, E.5
  • 19
    • 0030696044 scopus 로고    scopus 로고
    • Determining divergence times with a protein clock: update and reevaluation
    • PID: 9371794, COI: 1:CAS:528:DyaK2sXnvFamsL8%3D
    • Feng DF, Cho G, Doolittle RF: Determining divergence times with a protein clock: update and reevaluation. Proc Natl Acad Sci USA. 1997, 94: 13028-13033. 10.1073/pnas.94.24.13028. DOI: 10.1073/pnas.94.24.13028
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 13028-13033
    • Feng, D.F.1    Cho, G.2    Doolittle, R.F.3
  • 21
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • PID: 9381173, COI: 1:CAS:528:DyaK2sXmvVOrsL0%3D
    • Tatusov RL, Koonin EV, Lipman DJ: A genomic perspective on protein families. Science. 1997, 278: 631-637. 10.1126/science.278.5338.631. DOI: 10.1126/science.278.5338.631
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2    Lipman, D.J.3
  • 22
    • 0032509179 scopus 로고    scopus 로고
    • Comparison of the complete protein sets of worm and yeast: orthology and divergence
    • PID: 9851918, COI: 1:CAS:528:DyaK1cXotVOrsb8%3D
    • Chervitz SA, Aravind L, Sherlock G, Ball CA, Koonin EV, Dwight SS, Harris MA, Dolinski K, Mohr S, Smith T, et al: Comparison of the complete protein sets of worm and yeast: orthology and divergence. Science. 1998, 282: 2022-2028. 10.1126/science.282.5396.2022. DOI: 10.1126/science.282.5396.2022
    • (1998) Science , vol.282 , pp. 2022-2028
    • Chervitz, S.A.1    Aravind, L.2    Sherlock, G.3    Ball, C.A.4    Koonin, E.V.5    Dwight, S.S.6    Harris, M.A.7    Dolinski, K.8    Mohr, S.9    Smith, T.10
  • 24
    • 0034992826 scopus 로고    scopus 로고
    • The closest BLAST hit is often not the nearest neighbor
    • PID: 11443357, COI: 1:CAS:528:DC%2BD3MXksFOiurs%3D
    • Koski LB, Golding GB: The closest BLAST hit is often not the nearest neighbor. J Mol Evol. 2001, 52: 540-542. DOI: 10.1007/s002390010184
    • (2001) J Mol Evol , vol.52 , pp. 540-542
    • Koski, L.B.1    Golding, G.B.2
  • 25
    • 0033048708 scopus 로고    scopus 로고
    • 50Paired-like genes founded the Paired class
    • PID: 10079362, COI: 1:CAS:528:DyaK1MXht1Wrt7c%3D
    • 50 Paired-like genes founded the Paired class. Dev Genes Evol. 1999, 209: 186-197. 10.1007/s004270050243. DOI: 10.1007/s004270050243
    • (1999) Dev Genes Evol , vol.209 , pp. 186-197
    • Galliot, B.1    de Vargas, C.2    Miller, D.3
  • 26
    • 0035002013 scopus 로고    scopus 로고
    • The human genome sequence expedition: views from the ''base camp"
    • PID: 11337462, COI: 1:CAS:528:DC%2BD3MXjs1Wmtbo%3D
    • Green ED, Chakravarti A: The human genome sequence expedition: views from the ''base camp". Genome Res. 2001, 11: 645-651. 10.1101/gr.188701. DOI: 10.1101/gr.188701
    • (2001) Genome Res , vol.11 , pp. 645-651
    • Green, E.D.1    Chakravarti, A.2
  • 27
    • 0032509303 scopus 로고    scopus 로고
    • The taxonomy of developmental control in Caenorhabditiselegans
    • PID: 9851920, COI: 1:CAS:528:DyaK1cXotVOrt7s%3D
    • Ruvkun G., Hobert O: The taxonomy of developmental control in Caenorhabditiselegans. Science. 1998, 282: 2033-2041. 10.1126/science.282.5396.2033. DOI: 10.1126/science.282.5396.2033
    • (1998) Science , vol.282 , pp. 2033-2041
    • Ruvkun, G.1    Hobert, O.2
  • 28
    • 0034991442 scopus 로고    scopus 로고
    • REF-1, a protein with two bHLH domains, alters the pattern of cell fusion in C. elegansby regulating Hox protein activity
    • PID: 11311160, COI: 1:CAS:528:DC%2BD3MXktFyjtL8%3D
    • Alper S, Kenyon C: REF-1, a protein with two bHLH domains, alters the pattern of cell fusion in C. elegans by regulating Hox protein activity. Development. 2001, 128: 1793-1804.
    • (2001) Development , vol.128 , pp. 1793-1804
    • Alper, S.1    Kenyon, C.2
  • 29
    • 0028972715 scopus 로고
    • Specificity for the Hairy/Enhancer of split basic helix-loop-helix (bHLH) proteins maps outside othe bHLH domain and suggests two separable modes of transcriptional repression
    • PID: 8524259, COI: 1:CAS:528:DyaK2MXpsFKqu7s%3D
    • Dawson SR, Turner DL, Weintraub H, Parkhurst SM: Specificity for the Hairy/Enhancer of split basic helix-loop-helix (bHLH) proteins maps outside othe bHLH domain and suggests two separable modes of transcriptional repression. Mol Cell Biol. 1995, 15: 6923-6931. DOI: 10.1128/MCB.15.12.6923
    • (1995) Mol Cell Biol , vol.15 , pp. 6923-6931
    • Dawson, S.R.1    Turner, D.L.2    Weintraub, H.3    Parkhurst, S.M.4
  • 30
    • 0026653916 scopus 로고
    • Point mutations in the Drosophila hairy gene demonstrate in vivorequirement for basic, helix-loop-helix, and WRPW domains
    • Wainright SM, Ish-Horovicz D: Point mutations in the Drosophila hairy gene demonstrate in vivo requirement for basic, helix-loop-helix, and WRPW domains. Mol Cell Biol. 1992, 12: 2475-2483. DOI: 10.1128/MCB.12.6.2475
    • (1992) Mol Cell Biol , vol.12 , pp. 2475-2483
    • Wainright, S.M.1    Ish-Horovicz, D.2
  • 31
    • 0032054380 scopus 로고    scopus 로고
    • The function of hairy-related bHLH repressors proteins in cell fate decisions
    • PID: 9619101, COI: 1:STN:280:DyaK1c3ot1ylsg%3D%3D
    • Fisher A, Caudy M: The function of hairy-related bHLH repressors proteins in cell fate decisions. BioEssays. 1998, 20: 298-306. 10.1002/(SICI)1521-1878(199804)20:4<298::AID-BIES6>3.0.CO;2-M. DOI: 10.1002/(SICI)1521-1878(199804)20:4<298::AID-BIES6>3.0.CO;2-M
    • (1998) BioEssays , vol.20 , pp. 298-306
    • Fisher, A.1    Caudy, M.2
  • 32
    • 0030010697 scopus 로고    scopus 로고
    • The WRPW motif of the Hairy-related basic helix-loop-helix repressor proteins acts as 4-amino-acid transcription repression and protein-protein interaction domain
    • PID: 8649374, COI: 1:CAS:528:DyaK28XjtFCqsr0%3D
    • Fisher AL, Ohsako S, Caudy M: The WRPW motif of the Hairy-related basic helix-loop-helix repressor proteins acts as 4-amino-acid transcription repression and protein-protein interaction domain. Mol Cell Biol. 1996, 16: 2670-2677. DOI: 10.1128/MCB.16.6.2670
    • (1996) Mol Cell Biol , vol.16 , pp. 2670-2677
    • Fisher, A.L.1    Ohsako, S.2    Caudy, M.3
  • 33
    • 0030156554 scopus 로고    scopus 로고
    • collier, a novel regulator of Drosophilahead development, is expressed in a single mitotic domain
    • PID: 8793297, COI: 1:CAS:528:DyaK28XjvVGmsrc%3D
    • Crozatier M, Valle D, Dubois L, Ibnsouda S, Vincent A: collier, a novel regulator of Drosophila head development, is expressed in a single mitotic domain. Curr Biol. 1996, 6: 707-718. DOI: 10.1016/S0960-9822(09)00452-7
    • (1996) Curr Biol , vol.6 , pp. 707-718
    • Crozatier, M.1    Valle, D.2    Dubois, L.3    Ibnsouda, S.4    Vincent, A.5
  • 34
    • 0032030839 scopus 로고    scopus 로고
    • Control of cell lineage-specific development and transcription by bHLH-PAS proteins
    • PID: 9499397, COI: 1:CAS:528:DyaK1cXitVegu78%3D
    • Crews ST: Control of cell lineage-specific development and transcription by bHLH-PAS proteins. Genes Dev. 1998, 12: 607-620. DOI: 10.1101/gad.12.5.607
    • (1998) Genes Dev , vol.12 , pp. 607-620
    • Crews, S.T.1
  • 35
    • 0034602344 scopus 로고    scopus 로고
    • A kingdom-level phylogeny of eukaryotes based on combined protein data
    • PID: 11062127, COI: 1:CAS:528:DC%2BD3cXnvVWksL0%3D
    • Baldauf SL, Roger AJ, Wenk-Siefert I, Doolittle WF: A kingdom-level phylogeny of eukaryotes based on combined protein data. Science. 2000, 290: 972-977. 10.1126/science.290.5493.972. DOI: 10.1126/science.290.5493.972
    • (2000) Science , vol.290 , pp. 972-977
    • Baldauf, S.L.1    Roger, A.J.2    Wenk-Siefert, I.3    Doolittle, W.F.4
  • 36
    • 0035900653 scopus 로고    scopus 로고
    • Reconstructing/deconstructing the earliest eukaryotes: how comparative genomics can help
    • PID: 11719183, COI: 1:CAS:528:DC%2BD3MXovVCnsrk%3D
    • Dacks JB, Doolittle WF: Reconstructing/deconstructing the earliest eukaryotes: how comparative genomics can help. Cell. 2001, 107: 419-425. DOI: 10.1016/S0092-8674(01)00584-0
    • (2001) Cell , vol.107 , pp. 419-425
    • Dacks, J.B.1    Doolittle, W.F.2
  • 38
    • 0029664488 scopus 로고    scopus 로고
    • A common plan for dorsoventral patterning in Bilateria
    • PID: 8598900, COI: 1:CAS:528:DyaK28XhsFeis7c%3D
    • De Robertis DM, Sasai Y: A common plan for dorsoventral patterning in Bilateria. Nature. 1996, 380: 37-40. 10.1038/380037a0. DOI: 10.1038/380037a0
    • (1996) Nature , vol.380 , pp. 37-40
    • De Robertis, D.M.1    Sasai, Y.2
  • 39
    • 0033604619 scopus 로고    scopus 로고
    • Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology
    • PID: 10586878, COI: 1:CAS:528:DyaK1MXnvVykurg%3D
    • Soltis PS, Soltis DE, Chase MW: Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology. Nature. 1999, 402: 402-404. 10.1016/S0168-9002(97)00880-2. DOI: 10.1038/46528
    • (1999) Nature , vol.402 , pp. 402-404
    • Soltis, P.S.1    Soltis, D.E.2    Chase, M.W.3
  • 40
    • 0031010579 scopus 로고    scopus 로고
    • Evidence for a clade of nematodes, arthropods and other moulting animals
    • PID: 9168109, COI: 1:CAS:528:DyaK2sXjsF2htbk%3D
    • Aguinaldo AMA, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA, Lake JA: Evidence for a clade of nematodes, arthropods and other moulting animals. Nature. 1997, 387: 489-493. 10.1038/387489a0. DOI: 10.1038/387489a0
    • (1997) Nature , vol.387 , pp. 489-493
    • Aguinaldo, A.M.A.1    Turbeville, J.M.2    Linford, L.S.3    Rivera, M.C.4    Garey, J.R.5    Raff, R.A.6    Lake, J.A.7
  • 41
    • 0031877893 scopus 로고    scopus 로고
    • Large-scale taxonomic profiling of eukaryotic model organisms: a comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes
    • PID: 9647634, COI: 1:CAS:528:DyaK1cXkt1aru7o%3D
    • Mushegian AR, Garey JR, Martin J, Liu LX: Large-scale taxonomic profiling of eukaryotic model organisms: a comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes. Genome Res. 1998, 8: 590-598.
    • (1998) Genome Res , vol.8 , pp. 590-598
    • Mushegian, A.R.1    Garey, J.R.2    Martin, J.3    Liu, L.X.4
  • 42
    • 0031927040 scopus 로고    scopus 로고
    • MyoD and the specification of muscle and non-muscle fates during postembryonic development of the C. elegansmesoderm
    • PID: 9609831, COI: 1:CAS:528:DyaK1cXkvFansbw%3D
    • Harfe BD, Branda CS, Krause M, Stern MJ, Fire A: MyoD and the specification of muscle and non-muscle fates during postembryonic development of the C. elegans mesoderm. Development. 1998, 125: 2479-2488.
    • (1998) Development , vol.125 , pp. 2479-2488
    • Harfe, B.D.1    Branda, C.S.2    Krause, M.3    Stern, M.J.4    Fire, A.5
  • 43
    • 3543032767 scopus 로고    scopus 로고
    • Analysis of a Caenorhabditis elegansTwist homolog identifies conserved and divergent aspects of mesodermal patterning
    • PID: 9716413, COI: 1:CAS:528:DyaK1cXlslygsL4%3D
    • Harfe BD, Vaz Gomes A, Kenyon C, Liu J, Krause M, Fire A: Analysis of a Caenorhabditis elegans Twist homolog identifies conserved and divergent aspects of mesodermal patterning. Genes Dev. 1998, 12: 2623-2635. DOI: 10.1101/gad.12.16.2623
    • (1998) Genes Dev , vol.12 , pp. 2623-2635
    • Harfe, B.D.1    Vaz Gomes, A.2    Kenyon, C.3    Liu, J.4    Krause, M.5    Fire, A.6
  • 44
    • 0028961424 scopus 로고
    • A transcription factor controlling development of peripheral sense organs in C. elegans
    • PID: 7800042, COI: 1:CAS:528:DyaK2MXivFKjtbg%3D
    • Zhao C, Emmons SW: A transcription factor controlling development of peripheral sense organs in C. elegans. Nature. 1995, 373: 74-78. 10.1038/373074a0. DOI: 10.1038/373074a0
    • (1995) Nature , vol.373 , pp. 74-78
    • Zhao, C.1    Emmons, S.W.2
  • 45
    • 0033763794 scopus 로고    scopus 로고
    • The C. elegans NeuroD homolog cnd-1functions in multiple aspects of motor neuron fate specification
    • PID: 10976055, COI: 1:CAS:528:DC%2BD3cXotVWisbs%3D
    • Hallam S, Singer E, Waring D, Jin Y: The C. elegans NeuroD homolog cnd-1 functions in multiple aspects of motor neuron fate specification. Development. 2000, 127: 4239-4252.
    • (2000) Development , vol.127 , pp. 4239-4252
    • Hallam, S.1    Singer, E.2    Waring, D.3    Jin, Y.4
  • 47
    • 0031779207 scopus 로고    scopus 로고
    • Syntagms in development and evolution
    • PID: 9654036, COI: 1:STN:280:DyaK1czhs1Kjug%3D%3D
    • Huang F: Syntagms in development and evolution. Int J Dev Biol. 1998, 42: 487-494.
    • (1998) Int J Dev Biol , vol.42 , pp. 487-494
    • Huang, F.1
  • 48
    • 0032511146 scopus 로고    scopus 로고
    • Myogenesis: a view from Drosophila
    • PID: 9635422, COI: 1:CAS:528:DyaK1cXjvFKqsL4%3D
    • Baylies MK, Bate M, Gomez MR: Myogenesis: a view from Drosophila. Cell. 1998, 93: 921-927. DOI: 10.1016/S0092-8674(00)81198-8
    • (1998) Cell , vol.93 , pp. 921-927
    • Baylies, M.K.1    Bate, M.2    Gomez, M.R.3
  • 49
    • 0344223266 scopus 로고    scopus 로고
    • Comparisons of early nerve cord development in insects and vertebrates
    • PID: 10225991, COI: 1:CAS:528:DyaK1MXktFWrtLo%3D
    • Arendt D, Nübler-Jung K: Comparisons of early nerve cord development in insects and vertebrates. Development. 1999, 126: 2309-2325.
    • (1999) Development , vol.126 , pp. 2309-2325
    • Arendt, D.1    Nübler-Jung, K.2
  • 50
    • 0032733930 scopus 로고    scopus 로고
    • Gene and genome duplications in vertebrates: the one-to-four (to-eight in fish) rule and the evolution of novel gene functions
    • PID: 10600714, COI: 1:CAS:528:DyaK1MXotVKjsb0%3D
    • Meyer A, Schartl M: Gene and genome duplications in vertebrates: the one-to-four (to-eight in fish) rule and the evolution of novel gene functions. Curr Opin Cell Biol. 1999, 11: 699-704. 10.1016/S0955-0674(99)00039-3. DOI: 10.1016/S0955-0674(99)00039-3
    • (1999) Curr Opin Cell Biol , vol.11 , pp. 699-704
    • Meyer, A.1    Schartl, M.2
  • 51
    • 17144473540 scopus 로고    scopus 로고
    • Are we polyploids? A brief history of one hypothesis
    • PID: 11337465, COI: 1:CAS:528:DC%2BD3MXjs1Wmtbk%3D
    • Makalowski W: Are we polyploids? A brief history of one hypothesis. Genome Res. 2001, 11: 667-670. 10.1101/gr.188801. DOI: 10.1101/gr.188801
    • (2001) Genome Res , vol.11 , pp. 667-670
    • Makalowski, W.1
  • 52
    • 0032957497 scopus 로고    scopus 로고
    • Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history
    • PID: 10198122, COI: 1:CAS:528:DyaK1MXisFGis7o%3D
    • Hughes A: Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history. J Mol Evol. 1999, 48: 565-576. DOI: 10.1007/PL00006499
    • (1999) J Mol Evol , vol.48 , pp. 565-576
    • Hughes, A.1
  • 53
    • 0035154891 scopus 로고    scopus 로고
    • Is tetralogy true? Lack of support for the "one-to-four rule"
    • PID: 11141196, COI: 1:CAS:528:DC%2BD3MXhtVSmsL4%3D
    • Martin A: Is tetralogy true? Lack of support for the "one-to-four rule". Mol Biol Evol. 2001, 18: 89-93. DOI: 10.1093/oxfordjournals.molbev.a003723
    • (2001) Mol Biol Evol , vol.18 , pp. 89-93
    • Martin, A.1
  • 54
    • 0035010738 scopus 로고    scopus 로고
    • Ancient genome duplications did not structure the human Hox-bearing chromosomes
    • PID: 11337473, COI: 1:CAS:528:DC%2BD3MXjs1Wmurs%3D
    • Hughes AL, da Silva J, Friedman R: Ancient genome duplications did not structure the human Hox-bearing chromosomes. Genome Res. 2001, 11: 771-80. 10.1101/gr.GR-1600R. DOI: 10.1101/gr.GR-1600R
    • (2001) Genome Res , vol.11 , pp. 771-780
    • Hughes, A.L.1    da Silva, J.2    Friedman, R.3
  • 55
    • 0033603541 scopus 로고    scopus 로고
    • Early animal evolution: emerging views from comparative biology and geology
    • PID: 10381872, COI: 1:CAS:528:DyaK1MXkt1Kgsbk%3D
    • Knoll AH, Carroll SB: Early animal evolution: emerging views from comparative biology and geology. Science. 1999, 284: 2129-2137. 10.1126/science.284.5423.2129. DOI: 10.1126/science.284.5423.2129
    • (1999) Science , vol.284 , pp. 2129-2137
    • Knoll, A.H.1    Carroll, S.B.2
  • 57
    • 0035235252 scopus 로고    scopus 로고
    • Identification of conserved C2H2 zinc-finger gene families in the Bilateria
    • research0016.1
    • Knight RD, Shimeld SM: Identification of conserved C2H2 zinc-finger gene families in the Bilateria. Genome Biol. 2001, 2: research0016.1-0016.8. 10.1186/gb-2001-2-5-research0016.
    • (2001) Genome Biol , vol.2
    • Knight, R.D.1    Shimeld, S.M.2
  • 59
    • 85182665034 scopus 로고    scopus 로고
    • NCBI BLAST. [http://www.ncbi.nlm.nih.gov/BLAST]
    • Ncbi, B.1
  • 61
    • 0347715805 scopus 로고    scopus 로고
    • SMART database. [http://smart.embl-heidelberg.de]
    • SMART Database
  • 62
    • 0034641745 scopus 로고    scopus 로고
    • A genomewide survey of basic helix-loop-helix factors in Drosophila
    • PID: 10973473, COI: 1:CAS:528:DC%2BD3cXms1Crsb8%3D
    • Moore AW, Barbel S, Jan LY, Jan YN: A genomewide survey of basic helix-loop-helix factors in Drosophila. Proc Natl Acad Sci USA. 2000, 97: 10436-10441. 10.1073/pnas.170301897. DOI: 10.1073/pnas.170301897
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10436-10441
    • Moore, A.W.1    Barbel, S.2    Jan, L.Y.3    Jan, Y.N.4
  • 63
    • 0034967571 scopus 로고    scopus 로고
    • New members of the DrosophilaMyc transcription factor subfamily revealed by a genome-wide examination for basic helix-loop-helix genes
    • PID: 11404084, COI: 1:CAS:528:DC%2BD3MXkt1yjtbo%3D
    • Peyrefitte S, Kahn D, Haenlin M: New members of the Drosophila Myc transcription factor subfamily revealed by a genome-wide examination for basic helix-loop-helix genes. Mech Dev. 2001, 104: 99-104. 10.1016/S0925-4773(01)00360-4. DOI: 10.1016/S0925-4773(01)00360-4
    • (2001) Mech Dev , vol.104 , pp. 99-104
    • Peyrefitte, S.1    Kahn, D.2    Haenlin, M.3
  • 66
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • PID: 7984417, COI: 1:CAS:528:DyaK2MXitlSgu74%3D
    • Thompson JD, Higgins JD, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22: 4673-4680. DOI: 10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, J.D.2    Gibson, T.J.3
  • 68
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • PID: 1438297, COI: 1:CAS:528:DyaK3sXjsFCgsQ%3D%3D
    • Henikoff S, Henikoff JG: Amino acid substitution matrices from protein blocks. Proc Natl Acad Sci USA. 1992, 89: 10915-10919. DOI: 10.1073/pnas.89.22.10915
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 69
    • 0027910469 scopus 로고
    • Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain
    • PID: 8479534
    • Ferre-D'Amare AR, Prendergast GC, Ziff EB, Burley SK: Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain. Nature. 1993, 363: 38-45. 10.1038/363038a0. DOI: 10.1038/363038a0
    • (1993) Nature , vol.363 , pp. 38-45
    • Ferre-D'Amare, A.R.1    Prendergast, G.C.2    Ziff, E.B.3    Burley, S.K.4
  • 71
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • PID: 3447015, COI: 1:STN:280:DyaL1c7ovFSjsA%3D%3D
    • Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 1987, 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 74
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies
    • COI: 1:CAS:528:DyaK28XltlSmsLk%3D
    • Strimmer K, von Haeseler A: Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol Biol Evol. 1996, 13: 964-969. DOI: 10.1093/oxfordjournals.molbev.a025664
    • (1996) Mol Biol Evol , vol.13 , pp. 964-969
    • Strimmer, K.1    von Haeseler, A.2
  • 75
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • PID: 1633570, COI: 1:CAS:528:DyaK38Xlt1Okt7w%3D
    • Jones DT, Taylor WR, Thornton JM: The rapid generation of mutation data matrices from protein sequences. CABIOS. 1992, 8: 275-282.
    • (1992) CABIOS , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 76
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: an application to display phylogenetic trees on personal computers
    • PID: 8902363, COI: 1:STN:280:DyaK2s%2FlvVSgtg%3D%3D
    • Page RD: TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci. 1996, 12: 357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.1
  • 77
    • 85182631653 scopus 로고    scopus 로고
    • OMIM. [http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?db=OMIM]
    • OMIM.
  • 78
    • 85182710906 scopus 로고    scopus 로고
    • NCBI Locus Link
    • NCBI Locus Link. [http://www.ncbi.nlm.nih.gov/LocusLink/]
  • 79
    • 0032922520 scopus 로고    scopus 로고
    • The FlyBase database of the DrosophilaGenome Projects and community literature
    • The FlyBase Consortium: The FlyBase database of the Drosophila Genome Projects and community literature. Nucleic Acids Res. 1999, 27: 85-88. 10.1093/nar/27.1.85. DOI: 10.1093/nar/27.1.85
    • (1999) Nucleic Acids Res , vol.27 , pp. 85-88
  • 80
    • 84876308754 scopus 로고    scopus 로고
    • FlyBase. [http://www.flybase.org]
    • Flybase. [
  • 82
    • 85182711243 scopus 로고    scopus 로고
    • Wormbase. [http://www.wormbase.org]
    • Wormbase


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.