-
1
-
-
0036469913
-
The connection between transcription and genomic instability
-
AGUILERA, A., 2002 The connection between transcription and genomic instability. EMBO J. 21: 195-201.
-
(2002)
EMBO J.
, vol.21
, pp. 195-201
-
-
Aguilera, A.1
-
2
-
-
0034883255
-
Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences
-
BERGMAN, C. M., and M. KREITMAN, 2001 Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences. Genome Res. 11: 1335-1345.
-
(2001)
Genome Res.
, vol.11
, pp. 1335-1345
-
-
Bergman, C.M.1
Kreitman, M.2
-
3
-
-
0036900274
-
Patterns of insertion and deletion in contrasting chromatin domains
-
BLUMENSTIEL, J. P., D. L. HARTL and E. R. LOZOWSKV, 2002 Patterns of insertion and deletion in contrasting chromatin domains. Mol. Biol. Evol. 19: 2211-2225.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 2211-2225
-
-
Blumenstiel, J.P.1
Hartl, D.L.2
Lozowskv, E.R.3
-
4
-
-
0141593581
-
Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene
-
CHEN, Y., and W. STEPHAN, 2003 Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene. Proc. Natl. Acad. Sci. USA 100: 11499-11504.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 11499-11504
-
-
Chen, Y.1
Stephan, W.2
-
5
-
-
3843068862
-
Selective and mutational patterns associated with gene expression in humans: Influences on synonymous composition and intron presence
-
COMERON, J. M., 2004 Selective and mutational patterns associated with gene expression in humans: influences on synonymous composition and intron presence. Genetics 167: 1293-1304.
-
(2004)
Genetics
, vol.167
, pp. 1293-1304
-
-
Comeron, J.M.1
-
6
-
-
0033767383
-
The correlation between intron length and recombination in Drosophila: Dynamic equilibrium between mutational and selective forces
-
COMERON, J. M., and M. KREITMAN, 2000 The correlation between intron length and recombination in Drosophila: dynamic equilibrium between mutational and selective forces. Genetics 156: 1175-1190.
-
(2000)
Genetics
, vol.156
, pp. 1175-1190
-
-
Comeron, J.M.1
Kreitman, M.2
-
7
-
-
0026660667
-
Repair of UV-induced (6-4) photoproducts measured in individual genes in the Drosophila embryonic Kc cell line
-
DE COCK, J. G., A. VAN HOFFEN, J. WIJNANDS, G. MOLENAAR, P. H. LOHMAN et al., 1992 Repair of UV-induced (6-4) photoproducts measured in individual genes in the Drosophila embryonic Kc cell line. Nucleic Acids Res. 20: 4789-4793.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 4789-4793
-
-
De Cock, J.G.1
Van Hoffen, A.2
Wijnands, J.3
Molenaar, G.4
Lohman, P.H.5
-
8
-
-
18744395183
-
Numerous potentially functional but non-genic conserved sequences on human chromosome 21
-
DERMITZAKIS, E. T., A. REYMOND, R. LYLE, N. SCAMUFFA, C. UCLA et al., 2002 Numerous potentially functional but non-genic conserved sequences on human chromosome 21. Nature 420: 578-582.
-
(2002)
Nature
, vol.420
, pp. 578-582
-
-
Dermitzakis, E.T.1
Reymond, A.2
Lyle, R.3
Scamuffa, N.4
Ucla, C.5
-
9
-
-
0037372327
-
A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions
-
GLAZKO, G. V., E. V. KOONIN, I. B. ROGOZIN and S. A. SHABALINA, 2003 A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions. Trends Genet. 19: 119-124.
-
(2003)
Trends Genet.
, vol.19
, pp. 119-124
-
-
Glazko, G.V.1
Koonin, E.V.2
Rogozin, I.B.3
Shabalina, S.A.4
-
10
-
-
0347065347
-
Demography and natural selection have shaped genetic variation in Drosophila melanogaster: A multi-locus approach
-
GLINKA, S., L. OMETTO, S. MOUSSET, W. STEPHAN and D. DE LORENZO, 2003 Demography and natural selection have shaped genetic variation in Drosophila melanogaster: a multi-locus approach. Genetics 165: 1269-1278.
-
(2003)
Genetics
, vol.165
, pp. 1269-1278
-
-
Glinka, S.1
Ometto, L.2
Mousset, S.3
Stephan, W.4
De Lorenzo, D.5
-
11
-
-
0037380022
-
Transcription-associated mutational asymmetry in mammalian evolution
-
GREEN, P., B. EWING, W. MILLER, P. J. THOMAS, NISC COMPARATIVE SEQUENCING PROGRAM et al., 2003 Transcription-associated mutational asymmetry in mammalian evolution. Nat. Genet. 33: 514-517.
-
(2003)
Nat. Genet.
, vol.33
, pp. 514-517
-
-
Green, P.1
Ewing, B.2
Miller, W.3
Thomas, P.J.4
-
12
-
-
0008234549
-
Alternative splicing of human genes: More the rule than the exception?
-
HANKE, J., D. BRETT, I. ZASTROW, A. AYDIN, S. DELBRÜK et al., 1999 Alternative splicing of human genes: More the rule than the exception? Trends Genet. 15: 389-390.
-
(1999)
Trends Genet.
, vol.15
, pp. 389-390
-
-
Hanke, J.1
Brett, D.2
Zastrow, I.3
Aydin, A.4
Delbrük, S.5
-
13
-
-
1542723471
-
A variable dinucleotide repeat in the CFTR gene contributes to phenotype diversity by forming RNA secondary structures that alter splicing
-
HEFFERON, T. W., J. D. GROMAN, C. E. YURK and G. R. CUTTING, 2004 A variable dinucleotide repeat in the CFTR gene contributes to phenotype diversity by forming RNA secondary structures that alter splicing. Proc. Natl. Acad. Sci. USA 101: 3504-3509.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 3504-3509
-
-
Hefferon, T.W.1
Groman, J.D.2
Yurk, C.E.3
Cutting, G.R.4
-
14
-
-
10344256696
-
Patterns of polymorphism and divergence from noncoding sequences of Drosophila melanogaster and D. simulans: Evidence for nonequilibrium processes
-
KERN, A. D., and D. J. BEGUN, 2005 Patterns of polymorphism and divergence from noncoding sequences of Drosophila melanogaster and D. simulans: evidence for nonequilibrium processes. Mol. Biol. Evol. 22: 51-62.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 51-62
-
-
Kern, A.D.1
Begun, D.J.2
-
15
-
-
0028826670
-
Evolutionary dynamics of the enhancer region of even-skipped in Drosophila
-
LUDWIG, M. Z., and M. KREITMAN, 1995 Evolutionary dynamics of the enhancer region of even-skipped in Drosophila. Mol. Biol. Evol. 12: 1002-1011.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 1002-1011
-
-
Ludwig, M.Z.1
Kreitman, M.2
-
16
-
-
0031889035
-
Functional analysis of eve stripe 2 enhancer evolution in Drosophila: Rules governing conservation and change
-
LUDWIG, M. Z., N. H. PATEL and M. KREITMAN, 1998 Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change. Development 125: 949-958.
-
(1998)
Development
, vol.125
, pp. 949-958
-
-
Ludwig, M.Z.1
Patel, N.H.2
Kreitman, M.3
-
17
-
-
0026657738
-
Splicing signals in Drosophila: Intron size, information content, and consensus sequences
-
MOUNT, S. M., C. BURKS, G. HERTZ, G. D. STORMO, O. WHITE et al., 1992 Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Res. 20: 4255-4262.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 4255-4262
-
-
Mount, S.M.1
Burks, C.2
Hertz, G.3
Stormo, G.D.4
White, O.5
-
18
-
-
0347361692
-
Selective constraints on intron evolution in Drosophila
-
PARSCH, J., 2003 Selective constraints on intron evolution in Drosophila. Genetics 165: 1843-1851.
-
(2003)
Genetics
, vol.165
, pp. 1843-1851
-
-
Parsch, J.1
-
19
-
-
0031891484
-
High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups
-
PETROV, D. A., and D. L. HARTL, 1998 High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups. Mol. Biol. Evol. 15: 293-302.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 293-302
-
-
Petrov, D.A.1
Hartl, D.L.2
-
20
-
-
0036862056
-
How intron splicing affects the deletion and insertion profile in Drosophila melanogaster
-
PTAK, S. E., and D. A. PETROV, 2002 How intron splicing affects the deletion and insertion profile in Drosophila melanogaster. Genetics 162: 1233-1244.
-
(2002)
Genetics
, vol.162
, pp. 1233-1244
-
-
Ptak, S.E.1
Petrov, D.A.2
-
21
-
-
0028971143
-
MatInd and MatInspector: New fast and versatile tools for detection of consensus matches in nucleotide sequence data
-
QUANDT, K., K. FRECH, H. KARAS, E. WINGENDER and T. WERNER, 1995 MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res. 23: 4878-4884.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4878-4884
-
-
Quandt, K.1
Frech, K.2
Karas, H.3
Wingender, E.4
Werner, T.5
-
22
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
ROZAS, J., J. C. SÁNCHEZ-DELBARRIO, X. MESSEGUER and R. ROZAS, 2003 DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sánchez-Delbarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
23
-
-
0036999964
-
Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura
-
SCHAEFFER, S. W., 2002 Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura. Genet. Res. 80: 163-175.
-
(2002)
Genet. Res.
, vol.80
, pp. 163-175
-
-
Schaeffer, S.W.1
-
24
-
-
0034710295
-
DNA repair in Drosophila: Insights from the Drosophila genome sequence
-
SEKELSKY, J. J., M. H. BRODSKY and K. C. BURTIS, 2000 DNA repair in Drosophila: insights from the Drosophila genome sequence. J. Cell Biol. 150: F31-F36.
-
(2000)
J. Cell Biol.
, vol.150
-
-
Sekelsky, J.J.1
Brodsky, M.H.2
Burtis, K.C.3
-
25
-
-
0032848247
-
Pattern of selective constraint in C. elegans and C. briggsae genomes
-
SHABALINA, S. A., and A. KONDRASHOV, 1999 Pattern of selective constraint in C. elegans and C. briggsae genomes. Genet. Res. 74: 23-30.
-
(1999)
Genet. Res.
, vol.74
, pp. 23-30
-
-
Shabalina, S.A.1
Kondrashov, A.2
-
26
-
-
0028307171
-
Split genes and RNA splicing
-
SHARP, P. A., 1994 Split genes and RNA splicing. Cell 77: 805-815.
-
(1994)
Cell
, vol.77
, pp. 805-815
-
-
Sharp, P.A.1
-
27
-
-
0027963390
-
Molecular evolution of the metallothionein gene Mtn in the melanogaster species group: Results from Drosophila ananassae
-
STEPHAN, W., V. S. RODRIGUEZ, B. ZHOU and J. PARSCH, 1994 Molecular evolution of the metallothionein gene Mtn in the melanogaster species group: results from Drosophila ananassae. Genetics 138: 135-143.
-
(1994)
Genetics
, vol.138
, pp. 135-143
-
-
Stephan, W.1
Rodriguez, V.S.2
Zhou, B.3
Parsch, J.4
-
28
-
-
0021066244
-
Evolutionary relationship of DNA sequences in finite populations
-
TAJIMA, F., 1983 Evolutionary relationship of DNA sequences in finite populations. Genetics 105: 437-460.
-
(1983)
Genetics
, vol.105
, pp. 437-460
-
-
Tajima, F.1
-
29
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
TAJIMA, F., 1989 Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
30
-
-
0033976586
-
TRANSFAC: An integrated system for gene expression regulation
-
WINGENDER, E., X. CHEN, R. HEHL, H. KARAS, I. LIEBICH et al., 2000 TRANSFAC: an integrated system for gene expression regulation. Nucleic Acids Res. 28: 316-319.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 316-319
-
-
Wingender, E.1
Chen, X.2
Hehl, R.3
Karas, H.4
Liebich, I.5
-
31
-
-
0036675923
-
Minimal introns are not "junk"
-
YU, J., Z. YANG, M. KIBUKAWA, M. PADDOCK, D. PASSEY et al., 2002 Minimal introns are not "junk". Genome Res. 12: 1185-1189.
-
(2002)
Genome Res.
, vol.12
, pp. 1185-1189
-
-
Yu, J.1
Yang, Z.2
Kibukawa, M.3
Paddock, M.4
Passey, D.5
|