메뉴 건너뛰기




Volumn 80, Issue 3, 2002, Pages 163-175

Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL DEHYDROGENASE; DNA; NUCLEOTIDE;

EID: 0036999964     PISSN: 00166723     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0016672302005955     Document Type: Review
Times cited : (59)

References (55)
  • 1
    • 0034708480 scopus 로고    scopus 로고
    • The genome sequence of Drosophila melanogaster
    • and 195 others
    • Adams, M. D. and 195 others (2000). The genome sequence of Drosophila melanogaster. Science 287, 2185-2195.
    • (2000) Science , vol.287 , pp. 2185-2195
    • Adams, M.D.1
  • 2
    • 0032953881 scopus 로고    scopus 로고
    • Inferring the fitness effects of DNA mutations from polymorphism and divergence data: Statistical power to detect directional selection under stationarity and free recombination
    • Akashi, H. (1999). Inferring the fitness effects of DNA mutations from polymorphism and divergence data: statistical power to detect directional selection under stationarity and free recombination. Genetics 151, 221-238.
    • (1999) Genetics , vol.151 , pp. 221-238
    • Akashi, H.1
  • 3
    • 0030903283 scopus 로고    scopus 로고
    • Natural selection and the frequency distributions of 'silent' polymorphism in Drosophila
    • Akashi, H. & Schaeffer, S. W. (1997). Natural selection and the frequency distributions of 'silent' polymorphism in Drosophila. Genetics 146, 295-307.
    • (1997) Genetics , vol.146 , pp. 295-307
    • Akashi, H.1    Schaeffer, S.W.2
  • 6
    • 0030933005 scopus 로고    scopus 로고
    • The Adh-related gene of Drosophila melanogaster is expressed as a functional dicistronic messenger RNA: Multigenic transcription in higher organisms
    • Brogna, S. & Ashburner, M. (1997). The Adh-related gene of Drosophila melanogaster is expressed as a functional dicistronic messenger RNA: multigenic transcription in higher organisms. European Molecular Biology Organization Journal 16, 2023-2031.
    • (1997) European Molecular Biology Organization Journal , vol.16 , pp. 2023-2031
    • Brogna, S.1    Ashburner, M.2
  • 7
    • 0024379859 scopus 로고
    • Simultaneous editing of multiple nucleic acid and protein sequences with ESEE
    • Cabot, E. L. & Beckenbach, A. T. (1989). Simultaneous editing of multiple nucleic acid and protein sequences with ESEE. Computer Applications in the Biosciences 5, 233-234.
    • (1989) Computer Applications in the Biosciences , vol.5 , pp. 233-234
    • Cabot, E.L.1    Beckenbach, A.T.2
  • 8
    • 0345035503 scopus 로고    scopus 로고
    • Intron size and natural selection
    • Carvalho, A. B. & Clark, A. G. (1999). Intron size and natural selection. Nature 401, 344.
    • (1999) Nature , vol.401 , pp. 344
    • Carvalho, A.B.1    Clark, A.G.2
  • 10
    • 0029908769 scopus 로고    scopus 로고
    • The changing sizes of genes
    • Charlesworth, B. (1996). The changing sizes of genes. Nature 384, 315-316.
    • (1996) Nature , vol.384 , pp. 315-316
    • Charlesworth, B.1
  • 11
    • 0028108183 scopus 로고
    • The evolutionary dynamics of repetitive DNA in eukaryotes
    • Charlesworth, B., Sniegowski, P. & Stephan, W. (1994). The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371, 215-220.
    • (1994) Nature , vol.371 , pp. 215-220
    • Charlesworth, B.1    Sniegowski, P.2    Stephan, W.3
  • 13
    • 0033767383 scopus 로고    scopus 로고
    • The correlation between intron length and recombination in Drosophila. Dynamic equilibrium between mutational and selective forces
    • Comeron, J. M. & Kreitman, M. (2000). The correlation between intron length and recombination in Drosophila. Dynamic equilibrium between mutational and selective forces. Genetics 156, 1175-1190.
    • (2000) Genetics , vol.156 , pp. 1175-1190
    • Comeron, J.M.1    Kreitman, M.2
  • 14
    • 0036263105 scopus 로고    scopus 로고
    • Population, evolutionary and genomic consequences of interference selection
    • Comeron, J. M. & Kreitman, M. (2002). Population, evolutionary and genomic consequences of interference selection. Genetics 161, 389-410.
    • (2002) Genetics , vol.161 , pp. 389-410
    • Comeron, J.M.1    Kreitman, M.2
  • 15
    • 0033178886 scopus 로고    scopus 로고
    • Intron-exon structures of eukaryotic model organisms
    • Deutsch, M. & Long, M. (1999). Intron-exon structures of eukaryotic model organisms. Nucleic Acids Research 27, 3219-3228.
    • (1999) Nucleic Acids Research , vol.27 , pp. 3219-3228
    • Deutsch, M.1    Long, M.2
  • 16
    • 0029980416 scopus 로고    scopus 로고
    • New statistical tests of neutrality for DNA samples from a population
    • Fu, Y.-X. (1996). New statistical tests of neutrality for DNA samples from a population. Genetics 143, 557-570.
    • (1996) Genetics , vol.143 , pp. 557-570
    • Fu, Y.-X.1
  • 17
    • 0024505629 scopus 로고
    • Deletions in processed pseudogenes accumulate faster in rodents than in humans
    • Graur, D., Shuali, Y. & Li, W.-H. (1989). Deletions in processed pseudogenes accumulate faster in rodents than in humans. Journal of Molecular Evolution 28, 279-285.
    • (1989) Journal of Molecular Evolution , vol.28 , pp. 279-285
    • Graur, D.1    Shuali, Y.2    Li, W.-H.3
  • 18
    • 0002516595 scopus 로고    scopus 로고
    • Nested insertions of short mobile sequences in Drosophila P elements
    • Hagemann, S., Miller, W. J., Haring, E. & Pinsker, W. (1998). Nested insertions of short mobile sequences in Drosophila P elements. Chromosoma 107, 6-16.
    • (1998) Chromosoma , vol.107 , pp. 6-16
    • Hagemann, S.1    Miller, W.J.2    Haring, E.3    Pinsker, W.4
  • 19
    • 0036262851 scopus 로고    scopus 로고
    • Distinguishing between selection and population expansion in an experimental lineage of bacteriophage T7
    • Hahn, M. W., Rausher, M. D. & Cunningham, C. W. (2002). Distinguishing between selection and population expansion in an experimental lineage of bacteriophage T7. Genetics 161, 11-20.
    • (2002) Genetics , vol.161 , pp. 11-20
    • Hahn, M.W.1    Rausher, M.D.2    Cunningham, C.W.3
  • 20
    • 0032862461 scopus 로고    scopus 로고
    • DNA sequence variation and the recombinational landscape in Drosophila pseudoobscura: A study of the second chromosome
    • Hamblin, M. T. & Aquadro, C. F. (1999). DNA sequence variation and the recombinational landscape in Drosophila pseudoobscura: a study of the second chromosome. Genetics 153, 859-869.
    • (1999) Genetics , vol.153 , pp. 859-869
    • Hamblin, M.T.1    Aquadro, C.F.2
  • 21
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill, W. G. & Robertson, A. (1966). The effect of linkage on limits to artificial selection. Genetical Research 8, 269-294.
    • (1966) Genetical Research , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 23
    • 0033832602 scopus 로고    scopus 로고
    • Molecular population genetics of X-linked genes in Drosophila pseudoobscura
    • Kovacevic, M. & Schaeffer, S. W. (2000). Molecular population genetics of X-linked genes in Drosophila pseudoobscura. Genetics 156, 155-172.
    • (2000) Genetics , vol.156 , pp. 155-172
    • Kovacevic, M.1    Schaeffer, S.W.2
  • 24
    • 0028960424 scopus 로고
    • The detection of linkage disequilibrium in molecular sequence data
    • Lewontin, R. C. (1995). The detection of linkage disequilibrium in molecular sequence data. Genetics 140, 377-388.
    • (1995) Genetics , vol.140 , pp. 377-388
    • Lewontin, R.C.1
  • 25
    • 0036215045 scopus 로고    scopus 로고
    • Inferring the history of speciation from multilocus DNA sequence data: The case of Drosophila pseudoobscura and close relatives
    • Machado, C. A., Kliman, R. M., Markert, J. A. & Hey, J. (2002). Inferring the history of speciation from multilocus DNA sequence data: the case of Drosophila pseudoobscura and close relatives. Molecular Biology and Evolution 19, 472-488.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 472-488
    • Machado, C.A.1    Kliman, R.M.2    Markert, J.A.3    Hey, J.4
  • 26
    • 0344090977 scopus 로고
    • Slipped-mispairing and the evolution of introns
    • Moore, G. P. (1983). Slipped-mispairing and the evolution of introns. Trends in Biochemical Sciences 8, 411-414.
    • (1983) Trends in Biochemical Sciences , vol.8 , pp. 411-414
    • Moore, G.P.1
  • 27
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila: Intron size, information content, and consensus sequences
    • Mount, S. M., Burks, C., Hertz, G., Stormo, G. D., White, O. & Fields, C. (1992). Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Research 20, 4255-4562.
    • (1992) Nucleic Acids Research , vol.20 , pp. 4255-4562
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 30
    • 0031593238 scopus 로고    scopus 로고
    • Patterns and rates of indel evolution in processed pseudogenes from humans and murids
    • Ophir, R. & Graur, D. (1997). Patterns and rates of indel evolution in processed pseudogenes from humans and murids. Gene 205, 191-202.
    • (1997) Gene , vol.205 , pp. 191-202
    • Ophir, R.1    Graur, D.2
  • 31
    • 0031891484 scopus 로고    scopus 로고
    • High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups
    • Petrov, D. A. & Hartl, D. L. (1998). High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups. Molecular Biology and Evolution 15, 293-302.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 293-302
    • Petrov, D.A.1    Hartl, D.L.2
  • 32
    • 0029856377 scopus 로고    scopus 로고
    • High intrinsic rate of DNA loss in Drosophila
    • Petrov, D. A., Lozovskaya, E. R. & Hartl, D. L. (1996). High intrinsic rate of DNA loss in Drosophila. Nature 384, 346-349.
    • (1996) Nature , vol.384 , pp. 346-349
    • Petrov, D.A.1    Lozovskaya, E.R.2    Hartl, D.L.3
  • 33
    • 0031032330 scopus 로고    scopus 로고
    • Chromosomal homology and molecular organization of Muller's elements D and E in the Drosophila repleta species group
    • Ranz, J. M., Segarra, C. & Ruiz, A. (1997). Chromosomal homology and molecular organization of Muller's elements D and E in the Drosophila repleta species group. Genetics 145, 281-295.
    • (1997) Genetics , vol.145 , pp. 281-295
    • Ranz, J.M.1    Segarra, C.2    Ruiz, A.3
  • 34
    • 0035101024 scopus 로고    scopus 로고
    • How malleable is the eukaryotic genome? Extreme rate of chromosomal rearrangement in the genus Drosophila
    • Ranz, J. M., Casals, F. & Ruiz, A. (2001). How malleable is the eukaryotic genome? Extreme rate of chromosomal rearrangement in the genus Drosophila. Genome Research 11, 230-239.
    • (2001) Genome Research , vol.11 , pp. 230-239
    • Ranz, J.M.1    Casals, F.2    Ruiz, A.3
  • 35
    • 0000625869 scopus 로고
    • Analyzing tables of statistical tests
    • Rice, W. R. (1989). Analyzing tables of statistical tests. Evolution 43, 223-225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 36
    • 0028910659 scopus 로고
    • Molecular phylogeny and divergence times of drosophilid species
    • Russo, C. A., Takezaki, N. & Nei, M. (1995). Molecular phylogeny and divergence times of drosophilid species. Molecular Biology and Evolution 12, 391-404.
    • (1995) Molecular Biology and Evolution , vol.12 , pp. 391-404
    • Russo, C.A.1    Takezaki, N.2    Nei, M.3
  • 37
    • 0028351405 scopus 로고
    • Evolutionary rates of insertion and deletion in noncoding nucleotide sequences of primates
    • Saitou, N. & Ueda, S. (1994). Evolutionary rates of insertion and deletion in noncoding nucleotide sequences of primates. Molecular Biology and Evolution 11, 504-512.
    • (1994) Molecular Biology and Evolution , vol.11 , pp. 504-512
    • Saitou, N.1    Ueda, S.2
  • 38
    • 0023413150 scopus 로고
    • Nucleotide sequence of the Adh gene region of Drosophila pseudoobscura: Evolutionary change and evidence for an ancient gene duplication
    • Schaeffer, S. W. & Aquadro, C. F. (1987). Nucleotide sequence of the Adh gene region of Drosophila pseudoobscura: evolutionary change and evidence for an ancient gene duplication. Genetics 117, 61-73.
    • (1987) Genetics , vol.117 , pp. 61-73
    • Schaeffer, S.W.1    Aquadro, C.F.2
  • 39
    • 0025743127 scopus 로고
    • Nucleotide sequence analysis of Adh genes estimates the time of geographic isolation of the Bogota population of Drosophila pseudoobscura
    • Schaeffer, S. W. & Miller, E. L. (1991). Nucleotide sequence analysis of Adh genes estimates the time of geographic isolation of the Bogota population of Drosophila pseudoobscura. Proceedings of the National Academy of Sciences of the USA 88, 6097-6101.
    • (1991) Proceedings of the National Academy of Sciences of the USA , vol.88 , pp. 6097-6101
    • Schaeffer, S.W.1    Miller, E.L.2
  • 40
    • 0026784194 scopus 로고
    • Estimates of gene flow in Drosophila pseudoobscura determined from nucleotide sequence analysis of the alcohol dehydrogenase region
    • Schaeffer, S. W. & Miller, E. L. (1992a). Estimates of gene flow in Drosophila pseudoobscura determined from nucleotide sequence analysis of the alcohol dehydrogenase region. Genetics 132, 471-480.
    • (1992) Genetics , vol.132 , pp. 471-480
    • Schaeffer, S.W.1    Miller, E.L.2
  • 41
    • 0026744833 scopus 로고
    • Molecular population genetics of an electrophoretically monomorphic protein in the alcohol dehydrogenase region of Drosophila pseudoobscura
    • Schaeffer, S. W. & Miller, E. L. (1992b). Molecular population genetics of an electrophoretically monomorphic protein in the alcohol dehydrogenase region of Drosophila pseudoobscura. Genetics 132, 163-178.
    • (1992) Genetics , vol.132 , pp. 163-178
    • Schaeffer, S.W.1    Miller, E.L.2
  • 42
    • 0027484771 scopus 로고
    • Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura
    • Schaeffer, S. W. & Miller, E. L. (1993). Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura. Genetics 135, 541-552.
    • (1993) Genetics , vol.135 , pp. 541-552
    • Schaeffer, S.W.1    Miller, E.L.2
  • 43
    • 0034756694 scopus 로고    scopus 로고
    • Protein variation in ADH and ADH-RELATED in Drosophila pseudoobscura: Linkage disequilibrium between single nucleotide polymorphisms and protein alleles
    • Schaeffer, S. W., Walthour, C. S., Toleno, D. M., Olek, A. T. & Miller, E. L. (2001). Protein variation in ADH and ADH-RELATED in Drosophila pseudoobscura: linkage disequilibrium between single nucleotide polymorphisms and protein alleles. Genetics 159, 673-687.
    • (2001) Genetics , vol.159 , pp. 673-687
    • Schaeffer, S.W.1    Walthour, C.S.2    Toleno, D.M.3    Olek, A.T.4    Miller, E.L.5
  • 44
    • 0026504208 scopus 로고
    • Molecular organization of the X chromosome in different species of the obscura group of Drosophila
    • Segarra, C. & Aguade, M. (1992). Molecular organization of the X chromosome in different species of the obscura group of Drosophila. Genetics 130, 513-521.
    • (1992) Genetics , vol.130 , pp. 513-521
    • Segarra, C.1    Aguade, M.2
  • 45
    • 0029099781 scopus 로고
    • Properties of statistical tests of neutrality for DNA polymorphism data
    • Simonsen, K. L., Churchill, G. A. & Aquadro, C. F. (1995). Properties of statistical tests of neutrality for DNA polymorphism data. Genetics 141, 413-429.
    • (1995) Genetics , vol.141 , pp. 413-429
    • Simonsen, K.L.1    Churchill, G.A.2    Aquadro, C.F.3
  • 46
    • 0025951996 scopus 로고
    • Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations
    • Slatkin, M. & Hudson, R. R. (1991). Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129, 555-562.
    • (1991) Genetics , vol.129 , pp. 555-562
    • Slatkin, M.1    Hudson, R.R.2
  • 48
    • 0027316060 scopus 로고
    • A duplication including the Y allele of Lcp2 and the TRIM retrotransposon at the Lcp locus on the degenerating neo-Y chromosome of Drosophila miranda: Molecular structure and mechanisms by which it may have arisen
    • Steinemann, M. & Steinemann, S. (1993). A duplication including the Y allele of Lcp2 and the TRIM retrotransposon at the Lcp locus on the degenerating neo-Y chromosome of Drosophila miranda: molecular structure and mechanisms by which it may have arisen. Genetics 134, 497-505.
    • (1993) Genetics , vol.134 , pp. 497-505
    • Steinemann, M.1    Steinemann, S.2
  • 49
    • 0022410317 scopus 로고
    • Statistical methods of DNA sequence analysis: Detection of intragenic recombination or gene conversion
    • Stephens, J. C. (1985). Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion. Molecular Biology and Evolution 2, 539-556.
    • (1985) Molecular Biology and Evolution , vol.2 , pp. 539-556
    • Stephens, J.C.1
  • 50
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123, 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 51
    • 0032855533 scopus 로고    scopus 로고
    • Locating regions of differential variability in DNA and protein sequences
    • Tang, H. & Lewontin, R. C. (1999). Locating regions of differential variability in DNA and protein sequences. Genetics 153, 485-495.
    • (1999) Genetics , vol.153 , pp. 485-495
    • Tang, H.1    Lewontin, R.C.2
  • 52
    • 0029911389 scopus 로고    scopus 로고
    • The speciation history of Drosophila pseudoobscura and close relatives: Inferences from DNA sequence variation at the period locus
    • Wang, R. L. & Hey, J. (1996). The speciation history of Drosophila pseudoobscura and close relatives: inferences from DNA sequence variation at the period locus. Genetics 144, 1113-1126.
    • (1996) Genetics , vol.144 , pp. 1113-1126
    • Wang, R.L.1    Hey, J.2
  • 53
    • 0003243515 scopus 로고    scopus 로고
    • Gene flow and natural selection in the origin of Drosophila pseudoobscura and close relatives
    • Wang, R. L., Wakeley, J. & Hey, J. (1997). Gene flow and natural selection in the origin of Drosophila pseudoobscura and close relatives. Genetics 147, 1091-1106.
    • (1997) Genetics , vol.147 , pp. 1091-1106
    • Wang, R.L.1    Wakeley, J.2    Hey, J.3
  • 54
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson, G. A. (1975). On the number of segregating sites in genetical models without recombination. Theoretical Population Biology 7, 256-276.
    • (1975) Theoretical Population Biology , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 55
    • 0035100172 scopus 로고    scopus 로고
    • Mobile elements and the genesis of microsatellites in Dipterans
    • Wilder, J. & Hollocher, H. (2001). Mobile elements and the genesis of microsatellites in Dipterans. Molecular Biology and Evolution 18, 384-392.
    • (2001) Molecular Biology and Evolution , vol.18 , pp. 384-392
    • Wilder, J.1    Hollocher, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.