-
1
-
-
0036789480
-
Monte Carlo simulations of enzyme reactions in two dimensions: Fractal kinetics and spatial segregation
-
Berry H (2002) Monte Carlo simulations of enzyme reactions in two dimensions: Fractal kinetics and spatial segregation. Biophys J 83: 1891-1901.
-
(2002)
Biophys J
, vol.83
, pp. 1891-1901
-
-
Berry, H.1
-
2
-
-
0037380954
-
An integrated model of cardiac mitochondrial energy metabolism and calcium dynamics
-
Cortassa S, Aon MA, Marban E, Winslow RL, O'Rourke B (2003) An integrated model of cardiac mitochondrial energy metabolism and calcium dynamics. Biophys J 84: 2734-2755.
-
(2003)
Biophys J
, vol.84
, pp. 2734-2755
-
-
Cortassa, S.1
Aon, M.A.2
Marban, E.3
Winslow, R.L.4
O'Rourke, B.5
-
3
-
-
0031953771
-
Compliant realignment of binding sites in muscle: Transient behavior and mechanical tuning
-
Daniel TL, Trimble AC, Chase PB (1998) Compliant realignment of binding sites in muscle: transient behavior and mechanical tuning. Biophys J 74: 1611-1621.
-
(1998)
Biophys J
, vol.74
, pp. 1611-1621
-
-
Daniel, T.L.1
Trimble, A.C.2
Chase, P.B.3
-
4
-
-
0022422465
-
A model of cardiac electrical activity incorporating ionic pumps and concentration changes
-
DiFrancesco D, Noble D (1985) A model of cardiac electrical activity incorporating ionic pumps and concentration changes. Phil Trans R Soc Lond B 307: 353-98.
-
(1985)
Phil Trans R Soc Lond B
, vol.307
, pp. 353-398
-
-
Difrancesco, D.1
Noble, D.2
-
5
-
-
0034728963
-
Cooperativity of myosin molecules through strain-dependent chemistry
-
Duke T (1999) Cooperativity of myosin molecules through strain-dependent chemistry. Phil Trans R Soc Lond B 355: 529-538.
-
(1999)
Phil Trans R Soc Lond B
, vol.355
, pp. 529-538
-
-
Duke, T.1
-
6
-
-
0018877621
-
Cross bridge model of muscle contraction: Quantitative analysis
-
Eisenberg E, Hill TL, Chen Y-D (1980) Cross bridge model of muscle contraction: quantitative analysis. Biophys J 29: 195-227.
-
(1980)
Biophys J
, vol.29
, pp. 195-227
-
-
Eisenberg, E.1
Hill, T.L.2
Chen, Y.-D.3
-
7
-
-
0041822089
-
Join the crowd
-
Ellis RJ, Minton AP (2003) Join the crowd. Nature 425 (6953): 27-28.
-
(2003)
Nature
, vol.425
, Issue.6953
, pp. 27-28
-
-
Ellis, R.J.1
Minton, A.P.2
-
8
-
-
0031041515
-
Theoretical considerations on myofibril stiffness
-
Forcinito M, Epstein M, Herzog W (1997) Theoretical considerations on myofibril stiffness. Biophys J 72: 1278-1286.
-
(1997)
Biophys J
, vol.72
, pp. 1278-1286
-
-
Forcinito, M.1
Epstein, M.2
Herzog, W.3
-
9
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie DT (1977) Exact stochastic simulation of coupled chemical reactions. J Phys Chem 81: 2340-2361.
-
(1977)
J Phys Chem
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.T.1
-
10
-
-
0032213186
-
A distribution-moment model of deactivation in cardiac muscle
-
Guccione JM, Motabarzadeh I, Zahalak GI (1998) A distribution-moment model of deactivation in cardiac muscle. J Biomech 31: 1069-1073.
-
(1998)
J Biomech
, vol.31
, pp. 1069-1073
-
-
Guccione, J.M.1
Motabarzadeh, I.2
Zahalak, G.I.3
-
11
-
-
0041931122
-
Macromolecular crowding: Qualitative and semiquantitative successes, quantitative challenges
-
Hall D, Minton AP (2003) Macromolecular crowding: Qualitative and semiquantitative successes, quantitative challenges. Biochim Biophys Acta 1649: 127-139.
-
(2003)
Biochim Biophys Acta
, vol.1649
, pp. 127-139
-
-
Hall, D.1
Minton, A.P.2
-
12
-
-
35649001607
-
A quantitative description of membrane current and its application to conduction and excitation in nerve
-
Hodgkin AL, Huxley AF (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117: 500-544.
-
(1952)
J Physiol
, vol.117
, pp. 500-544
-
-
Hodgkin, A.L.1
Huxley, A.F.2
-
13
-
-
0037163062
-
Cardiac microstructure: Implications for electrical propagation and defibrillation in the heart
-
Hooks D, Tomlinson K, Marsden SG, LeGrice I, Smaill BH, Pullan AJ, Hunter PJ (2002) Cardiac microstructure: implications for electrical propagation and defibrillation in the heart. Circ Res 91: 331-338.
-
(2002)
Circ Res
, vol.91
, pp. 331-338
-
-
Hooks, D.1
Tomlinson, K.2
Marsden, S.G.3
Legrice, I.4
Smaill, B.H.5
Pullan, A.J.6
Hunter, P.J.7
-
16
-
-
0037336350
-
Integration from proteins to organs: The Physiome Project
-
Hunter PJ, Borg TK (2003) Integration from proteins to organs: the Physiome Project. Nat Rev Mol Cell Biol 4: 237-243.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 237-243
-
-
Hunter, P.J.1
Borg, T.K.2
-
18
-
-
33847013578
-
Muscle structure and theories of contraction
-
Huxley AF (1957) Muscle structure and theories of contraction. Prog Biophys Biophys Chem 7: 255-318.
-
(1957)
Prog Biophys Biophys Chem
, vol.7
, pp. 255-318
-
-
Huxley, A.F.1
-
19
-
-
0031594597
-
2+ dynamics: The role of ryanodine receptor adaptation and sarcoplasmic reticulum load
-
2+ dynamics: the role of ryanodine receptor adaptation and sarcoplasmic reticulum load. Biophys J 74: 1149-1168.
-
(1998)
Biophys J
, vol.74
, pp. 1149-1168
-
-
Jafri, S.1
Rice, J.2
Winslow, R.3
-
20
-
-
0019308296
-
Sinusoidal analysis: A high resolution method for correlating biochemical reactions with physiological processes in activated skeletal muscles of rabbit, frog and crayfish
-
Kawai M, Brandt PW (1980) Sinusoidal analysis: a high resolution method for correlating biochemical reactions with physiological processes in activated skeletal muscles of rabbit, frog and crayfish. J Musc Res Cell Motil 1: 279-303.
-
(1980)
J Musc Res Cell Motil
, vol.1
, pp. 279-303
-
-
Kawai, M.1
Brandt, P.W.2
-
21
-
-
0027216259
-
Crossbridge scheme and the kinetic constants of elementary steps deduced from chemically skinned papillary and trabecular muscles of the ferret
-
Kawai M, Saeki Y, Zhao Y (1993a) Crossbridge scheme and the kinetic constants of elementary steps deduced from chemically skinned papillary and trabecular muscles of the ferret. Circ Res 73: 35-50.
-
(1993)
Circ Res
, vol.73
, pp. 35-50
-
-
Kawai, M.1
Saeki, Y.2
Zhao, Y.3
-
22
-
-
0027504562
-
Elementary steps of contraction probed by sinusoidal analysis technique in rabbit psoas fibers
-
Kawai M, Zhao Y, Halvorson HR (1993b) Elementary steps of contraction probed by sinusoidal analysis technique in rabbit psoas fibers. Adv Exp Med Biol 332: 577-580.
-
(1993)
Adv Exp Med Biol
, vol.332
, pp. 577-580
-
-
Kawai, M.1
Zhao, Y.2
Halvorson, H.R.3
-
23
-
-
0036500993
-
Systems biology: A brief overview
-
Kitano H (2002a) systems biology: a brief overview. Science 295: 1662-1664.
-
(2002)
Science
, vol.295
, pp. 1662-1664
-
-
Kitano, H.1
-
24
-
-
0037079054
-
Computational systems biology
-
Kitano H (2002b) Computational systems biology. Nature 420: 206-210.
-
(2002)
Nature
, vol.420
, pp. 206-210
-
-
Kitano, H.1
-
25
-
-
0015239903
-
Enzyme reactions in polymer media
-
Laurent TC (1971) Enzyme reactions in polymer media. Eur J Biochem 21: 498-506.
-
(1971)
Eur J Biochem
, vol.21
, pp. 498-506
-
-
Laurent, T.C.1
-
26
-
-
0029151575
-
Laminar structure of the heart: Ventricular myocyte arrangement and connective tissue architecture in the dog
-
Le Grice IJ, Smaill BH, Chai LZ, Edgar SG, Gavin JB, Hunter PJ (1995) Laminar structure of the heart: ventricular myocyte arrangement and connective tissue architecture in the dog. Am J Physiol 269: H571-H582.
-
(1995)
Am J Physiol
, vol.269
-
-
Le Grice, I.J.1
Smaill, B.H.2
Chai, L.Z.3
Edgar, S.G.4
Gavin, J.B.5
Hunter, P.J.6
-
27
-
-
0025891531
-
A model of the ventricular cardiac action potential. Depolarization, repolarization, and their interaction
-
Luo CH, Rudy Y (1991) A model of the ventricular cardiac action potential. Depolarization, repolarization, and their interaction. Circ Res 68(6): 1501-1526.
-
(1991)
Circ Res
, vol.68
, Issue.6
, pp. 1501-1526
-
-
Luo, C.H.1
Rudy, Y.2
-
28
-
-
0028233422
-
A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes
-
Luo CH, Rudy Y (1994) A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes. Circ Res 74(6): 1071-1096.
-
(1994)
Circ Res
, vol.74
, Issue.6
, pp. 1071-1096
-
-
Luo, C.H.1
Rudy, Y.2
-
29
-
-
0036924212
-
A simple model with myofilament compliance predicts activation-dependent crossbridge kinetics in skinned skeletal fibers
-
Martyn DA, Chase PB, Regnier M, Gordon AM (2002) A simple model with myofilament compliance predicts activation-dependent crossbridge kinetics in skinned skeletal fibers. Biophys J 83: 3425-3434.
-
(2002)
Biophys J
, vol.83
, pp. 3425-3434
-
-
Martyn, D.A.1
Chase, P.B.2
Regnier, M.3
Gordon, A.M.4
-
31
-
-
0037044862
-
Macromolecular architecture in eukaryotic cells visualized by cryoelectron tomography
-
Medalia O, Weber I, Frangakis AS, Nicastro D, Gerisch G, Baumeister W (2002) Macromolecular architecture in eukaryotic cells visualized by cryoelectron tomography. Science 298 (5596): 1209-1213.
-
(2002)
Science
, vol.298
, Issue.5596
, pp. 1209-1213
-
-
Medalia, O.1
Weber, I.2
Frangakis, A.S.3
Nicastro, D.4
Gerisch, G.5
Baumeister, W.6
-
32
-
-
0034906940
-
2+, and regulation of ion pumps in ventricular myocyte
-
2+, and regulation of ion pumps in ventricular myocyte. Biophys J 81(2): 614-629.
-
(2001)
Biophys J
, vol.81
, Issue.2
, pp. 614-629
-
-
Michailova, A.1
McCulloch, A.2
-
33
-
-
0032492834
-
Predicting temporal fluctuations in an intracellular signalling pathway
-
Morton-Firth CJ, Bray D (1998) Predicting temporal fluctuations in an intracellular signalling pathway. J Theor Biol 192: 117-128.
-
(1998)
J Theor Biol
, vol.192
, pp. 117-128
-
-
Morton-Firth, C.J.1
Bray, D.2
-
35
-
-
0031917543
-
Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes
-
Noble D, Varghese A, Kohl P, Noble P (1998) Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes. Can J Cardiol 14(1): 123-134.
-
(1998)
Can J Cardiol
, vol.14
, Issue.1
, pp. 123-134
-
-
Noble, D.1
Varghese, A.2
Kohl, P.3
Noble, P.4
-
37
-
-
0036082392
-
The rise of computational biology
-
Noble D (2002b) The rise of computational biology. Nat Rev Mol Cell Biol 3: 460-463.
-
(2002)
Nat Rev Mol Cell Biol
, vol.3
, pp. 460-463
-
-
Noble, D.1
-
38
-
-
0028907268
-
A cross-bridge model that is able to explain mechanical and energetic properties of shortening muscle
-
Piazzesi G, Lombardi V (1995) A cross-bridge model that is able to explain mechanical and energetic properties of shortening muscle. Biophys J 68: 1966-1979.
-
(1995)
Biophys J
, vol.68
, pp. 1966-1979
-
-
Piazzesi, G.1
Lombardi, V.2
-
39
-
-
0346850834
-
Modeling beta-adrenergic control of cardiac myocyte contractility in silico
-
Saucerman JJ, Brunton LL, Michailova AP, McCulloch AD (2003) Modeling beta-adrenergic control of cardiac myocyte contractility in silico. J Biol Chem 278(48): 7997-8003
-
(2003)
J Biol Chem
, vol.278
, Issue.48
, pp. 7997-8003
-
-
Saucerman, J.J.1
Brunton, L.L.2
Michailova, A.P.3
McCulloch, A.D.4
-
40
-
-
0038399793
-
A spatially extended stochastic model of the bacterial chemotaxis signalling pathway
-
Shimizu TS, Aksenov SV, Bray D (2003) A spatially extended stochastic model of the bacterial chemotaxis signalling pathway. J Mol Biol 329: 291-309.
-
(2003)
J Mol Biol
, vol.329
, pp. 291-309
-
-
Shimizu, T.S.1
Aksenov, S.V.2
Bray, D.3
-
41
-
-
0142037517
-
Computational cell biology - The stochastic approach
-
Kitano H., ed. Cambridge, Mass: MIT Press
-
Shimizu TS, Bray D (2001) Computational cell biology - the stochastic approach. In: Kitano H., ed. Foundations of Systems Biology. Cambridge, Mass: MIT Press.
-
(2001)
Foundations of Systems Biology
-
-
Shimizu, T.S.1
Bray, D.2
-
42
-
-
0031881902
-
A strain-dependent ratchet model for [phosphate]- and [ATP]-dependent muscle contraction
-
Smith DA (1998) A strain-dependent ratchet model for [phosphate]- and [ATP]-dependent muscle contraction. J Muscle Res Cell Motility 19: 189-211.
-
(1998)
J Muscle Res Cell Motility
, vol.19
, pp. 189-211
-
-
Smith, D.A.1
-
43
-
-
1642389080
-
New developments in an anatomical framework for modelling cardiac ischemia
-
Smith NP, Mulquiney PJ, Stevens C, Pullan AJ, Hunter PJ (2003) New developments in an anatomical framework for modelling cardiac ischemia. Int J Bifurc Chaos 13(12): 3717-3723.
-
(2003)
Int J Bifurc Chaos
, vol.13
, Issue.12
, pp. 3717-3723
-
-
Smith, N.P.1
Mulquiney, P.J.2
Stevens, C.3
Pullan, A.J.4
Hunter, P.J.5
-
44
-
-
0345393845
-
From sarcomere to cell: An efficient algorithm for linking mathematical models of muscle contraction
-
Smith NP (2003) From sarcomere to cell: an efficient algorithm for linking mathematical models of muscle contraction. Bull Math Biol 65: 1141-1162.
-
(2003)
Bull Math Biol
, vol.65
, pp. 1141-1162
-
-
Smith, N.P.1
-
45
-
-
0019592007
-
A distribution-moment approximation for kinetic theories of muscular contraction
-
Zahalak GI (1981) A distribution-moment approximation for kinetic theories of muscular contraction. Math Biosci 55: 89-114.
-
(1981)
Math Biosci
, vol.55
, pp. 89-114
-
-
Zahalak, G.I.1
|