메뉴 건너뛰기




Volumn 38, Issue 5, 2004, Pages 786-797

Specificiety of DNA-protein interactions within transcription complexes of Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

REGULATOR PROTEIN; DNA DIRECTED RNA POLYMERASE; RNA POLYMERASE ALPHA SUBUNIT; TRANSCRIPTION FACTOR;

EID: 16644381672     PISSN: 00268984     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (2)

References (75)
  • 1
    • 0033765113 scopus 로고    scopus 로고
    • Functional modulation of Escherichia coli RNA polymerase
    • Ishihama A. 2000. Functional modulation of Escherichia coli RNA polymerase. Annu. Rev. Microbiol. 54, 499-518.
    • (2000) Annu. Rev. Microbiol. , vol.54 , pp. 499-518
    • Ishihama, A.1
  • 2
    • 0034666279 scopus 로고    scopus 로고
    • Competition among seven Escherichia coli σ subunits: Relative binding affinities to the core RNA polymerase
    • Maeda H., Fujita N., Ishihama A. 2000. Competition among seven Escherichia coli σ subunits: relative binding affinities to the core RNA polymerase. Nucleic Acids Res. 28, 3497-3503.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 3497-3503
    • Maeda, H.1    Fujita, N.2    Ishihama, A.3
  • 4
    • 0032574843 scopus 로고    scopus 로고
    • A stationary phase protein in Escherichia coli with binding activity to the major σ-subunit of RNA polymerase
    • Jishage M., Ishihama A. 1998. A stationary phase protein in Escherichia coli with binding activity to the major σ-subunit of RNA polymerase. Proc. Natl. Acad. Sci. USA. 95, 4953-4958.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 4953-4958
    • Jishage, M.1    Ishihama, A.2
  • 5
    • 0030907038 scopus 로고    scopus 로고
    • Modulation of the Escherichia coli sigma E (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins
    • Missiakas D., Mayer M.P., Lemaire C. 1997. Modulation of the Escherichia coli sigma E (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins. Mol. Microbiol. 24, 355-371.
    • (1997) Mol. Microbiol. , vol.24 , pp. 355-371
    • Missiakas, D.1    Mayer, M.P.2    Lemaire, C.3
  • 6
    • 0025678936 scopus 로고
    • Novel two-component transmembrane transcription control: Regulation of iron dicitrate transport in Escherichia coli K-12
    • van Hove B., Staudenmaier H., Braun V. 1990. Novel two-component transmembrane transcription control: regulation of iron dicitrate transport in Escherichia coli K-12. J. Bacteriol. 172, 6749-6758.
    • (1990) J. Bacteriol. , vol.172 , pp. 6749-6758
    • Van Hove, B.1    Staudenmaier, H.2    Braun, V.3
  • 7
    • 0032573426 scopus 로고    scopus 로고
    • A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome
    • Robison K., McGuire A.M., Church G.M. 1998. A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome. J. Mol. Biol. 284, 241-254.
    • (1998) J. Mol. Biol. , vol.284 , pp. 241-254
    • Robison, K.1    McGuire, A.M.2    Church, G.M.3
  • 8
    • 0033021173 scopus 로고    scopus 로고
    • Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival
    • Ishihama A. 1999. Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival. Genes Cells. 4, 135-143.
    • (1999) Genes Cells , vol.4 , pp. 135-143
    • Ishihama, A.1
  • 9
    • 0032731196 scopus 로고    scopus 로고
    • Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity
    • Talukder A.A., Ishihama A. 1999. Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity. J. Biol. Chem. 274, 33105-33113.
    • (1999) J. Biol. Chem. , vol.274 , pp. 33105-33113
    • Talukder, A.A.1    Ishihama, A.2
  • 10
    • 0024578495 scopus 로고
    • DNA supercoiling and prokaryotic transcription
    • Pruss G.J., Drlica K. 1989. DNA supercoiling and prokaryotic transcription. Cell. 56, 521-523.
    • (1989) Cell , vol.56 , pp. 521-523
    • Pruss, G.J.1    Drlica, K.2
  • 11
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of Escherichia coli nucleoid
    • Azam T.A., Iwata A., Nishimura A., Ueda S., Ishihama A. 1999. Growth phase-dependent variation in protein composition of Escherichia coli nucleoid. J. Bacteriol. 181, 6361-6370.
    • (1999) J. Bacteriol. , vol.181 , pp. 6361-6370
    • Azam, T.A.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 12
    • 0036204574 scopus 로고    scopus 로고
    • Effect of different concentrations of H-NS protein on chromosome replication and the cell cycle in Escherichia coli
    • Atlung T., Hansen F.G. 2002. Effect of different concentrations of H-NS protein on chromosome replication and the cell cycle in Escherichia coli. J. Bacteriol. 184, 1843-1850.
    • (2002) J. Bacteriol. , vol.184 , pp. 1843-1850
    • Atlung, T.1    Hansen, F.G.2
  • 13
    • 0034625237 scopus 로고    scopus 로고
    • 6S RNA regulates E. coli RNA polymerase activity
    • Wassarman K.M., Storz G. 2000. 6S RNA regulates E. coli RNA polymerase activity. Cell. 101, 613-623.
    • (2000) Cell , vol.101 , pp. 613-623
    • Wassarman, K.M.1    Storz, G.2
  • 14
    • 0034816477 scopus 로고    scopus 로고
    • Regulatory interactions of Csr components: The RNA binding protein CsrA activates csrB transcription in Escherichia coli
    • Gudapaty S., Suzuki K., Wang X., Babitzke P., Romeo T. 2001. Regulatory interactions of Csr components: the RNA binding protein CsrA activates csrB transcription in Escherichia coli. J. Bacteriol. 183, 6017-6027.
    • (2001) J. Bacteriol. , vol.183 , pp. 6017-6027
    • Gudapaty, S.1    Suzuki, K.2    Wang, X.3    Babitzke, P.4    Romeo, T.5
  • 16
    • 0037123602 scopus 로고    scopus 로고
    • Structural basis of transcription initiation: An RNA polymerase holoenzyme/DNA complex at 6.5 Å resolution
    • Murakami K.S., Masuda S., Campbell E.A., Muzzin O., Darst S.A. 2002. Structural basis of transcription initiation: an RNA polymerase holoenzyme/DNA complex at 6.5 Å resolution. Science. 296, 1285-1290.
    • (2002) Science , vol.296 , pp. 1285-1290
    • Murakami, K.S.1    Masuda, S.2    Campbell, E.A.3    Muzzin, O.4    Darst, S.A.5
  • 18
    • 33747388067 scopus 로고    scopus 로고
    • Russian source
  • 20
    • 0030965301 scopus 로고    scopus 로고
    • 70 subunit is responsible for the recognition of "extended-10" motif of promoters
    • 70 subunit is responsible for the recognition of "extended-10" motif of promoters. EMBO J. 16, 4034-4040.
    • (1997) EMBO J. , vol.16 , pp. 4034-4040
    • Barne, K.A.1    Bown, J.A.2    Busby, S.J.3    Minchin, S.D.4
  • 21
    • 0029835151 scopus 로고    scopus 로고
    • A consensus structure for sigma S-dependent promoters
    • Espinosa-Urgel M., Chamizo C., Tormo A. 1996. A consensus structure for sigma S-dependent promoters. Mol. Microbiol. 21, 657-659.
    • (1996) Mol. Microbiol. , vol.21 , pp. 657-659
    • Espinosa-Urgel, M.1    Chamizo, C.2    Tormo, A.3
  • 22
    • 0035839452 scopus 로고    scopus 로고
    • Sigma38 (rpoS)RNA polymerase promoter engagement via -10 region nucleotides
    • Lee S.J., Gralla J.D. 2001. Sigma38 (rpoS)RNA polymerase promoter engagement via -10 region nucleotides. J. Biol. Chem. 276, 30064-30071.
    • (2001) J. Biol. Chem. , vol.276 , pp. 30064-30071
    • Lee, S.J.1    Gralla, J.D.2
  • 25
    • 0025769570 scopus 로고
    • Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S
    • Lange R., Hengge-Aaronis R. 1991. Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S. J. Bacteriol. 173, 4474-4481.
    • (1991) J. Bacteriol. , vol.173 , pp. 4474-4481
    • Lange, R.1    Hengge-Aaronis, R.2
  • 29
    • 0026612797 scopus 로고
    • 70 family: Sequence conservation and evolutionary relationship
    • 70 family: sequence conservation and evolutionary relationship. J. Bacteriol. 174, 3843-3849.
    • (1992) J. Bacteriol. , vol.174 , pp. 3843-3849
    • Lonetto, M.1    Gribskov, M.2    Gross, C.A.3
  • 30
    • 0031784284 scopus 로고    scopus 로고
    • The ftsQ1p gearbox promoter of Escherichia coli is a major sigma S-dependent promoter in the ddl-ftsA region
    • Ballesteros M., Kusano S., Ishihama A., Vicente M. 1998. The ftsQ1p gearbox promoter of Escherichia coli is a major sigma S-dependent promoter in the ddl-ftsA region. Mol. Microbiol. 30, 419-430.
    • (1998) Mol. Microbiol. , vol.30 , pp. 419-430
    • Ballesteros, M.1    Kusano, S.2    Ishihama, A.3    Vicente, M.4
  • 36
    • 0033149857 scopus 로고    scopus 로고
    • Reevaluation of the promoter structure of the class 3 flagellar operons of Escherichia coli and Salmonella
    • Ide N., Ikebe T., Kutsukake K. 1999. Reevaluation of the promoter structure of the class 3 flagellar operons of Escherichia coli and Salmonella. Genes Genet. Syst. 74, 113-116.
    • (1999) Genes Genet. Syst. , vol.74 , pp. 113-116
    • Ide, N.1    Ikebe, T.2    Kutsukake, K.3
  • 38
    • 0032952075 scopus 로고    scopus 로고
    • DNA bendability - A novel feature in E. coli promoter recognition
    • Ozoline O.N., Deev A.A., Trifonov E.N. 1999. DNA bendability - a novel feature in E. coli promoter recognition. J. Biomol. Struct. Dynamics. 16, 825-831.
    • (1999) J. Biomol. Struct. Dynamics , vol.16 , pp. 825-831
    • Ozoline, O.N.1    Deev, A.A.2    Trifonov, E.N.3
  • 39
    • 0033575742 scopus 로고    scopus 로고
    • Wrapping of DNA around the E. coli RNA polymerase open promoter complex
    • Rivetti C., Guthold M., Bustamante C. 1999. Wrapping of DNA around the E. coli RNA polymerase open promoter complex. EMBO J. 18, 4464-4475.
    • (1999) EMBO J. , vol.18 , pp. 4464-4475
    • Rivetti, C.1    Guthold, M.2    Bustamante, C.3
  • 40
    • 0029041940 scopus 로고
    • Steriochemical basis of DNA bending by transcription factors
    • Suzuki M., Nato Y. 1995. Steriochemical basis of DNA bending by transcription factors. Nucleic Acids Res. 23, 2083-2091.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 2083-2091
    • Suzuki, M.1    Nato, Y.2
  • 41
  • 42
    • 0032522139 scopus 로고    scopus 로고
    • DNA bending: The prevalence of kinkiness and the virtues of normality
    • Dickerson R.E. 1998. DNA bending: the prevalence of kinkiness and the virtues of normality. Nucleic Acids Res. 26, 1906-1926.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1906-1926
    • Dickerson, R.E.1
  • 44
    • 0032544080 scopus 로고    scopus 로고
    • Identification of an UP element consensus sequence for bacterial promoters
    • Estrem S.T., Gaal T., Ross W., Gourse R.L. 1998. Identification of an UP element consensus sequence for bacterial promoters. Proc. Natl. Acad. Sci. USA. 95, 9761-9766.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 9761-9766
    • Estrem, S.T.1    Gaal, T.2    Ross, W.3    Gourse, R.L.4
  • 45
    • 0033567215 scopus 로고    scopus 로고
    • Bacterial promoter architecture: Subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit
    • Estrem S.T., Ross W., Gaal T., Chen Z.W., Niu W., Ebright R.H., Course R.L. 1999. Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit. Genes Dev. 13, 2134-2147.
    • (1999) Genes Dev. , vol.13 , pp. 2134-2147
    • Estrem, S.T.1    Ross, W.2    Gaal, T.3    Chen, Z.W.4    Niu, W.5    Ebright, R.H.6    Course, R.L.7
  • 46
    • 0028785899 scopus 로고
    • Structure of open promoter complexes with E. coli RNA polymerase as revealed by DNAse 1 footprinting technique. Compilation analysis
    • Ozoline O.N., Tsyganov M.A. 1995. Structure of open promoter complexes with E. coli RNA polymerase as revealed by DNAse 1 footprinting technique. Compilation analysis. Nucleic Acids Res. 23, 4533-4541.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4533-4541
    • Ozoline, O.N.1    Tsyganov, M.A.2
  • 47
    • 0031691355 scopus 로고    scopus 로고
    • Escherichia coli promoters with UP elements of different strengths: Modular structure of bacterial promoters
    • Ross W., Aiyar S.E., Salomon J., Course R.L. 1998. Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters. J. Bacteriol. 180, 5375-5383.
    • (1998) J. Bacteriol. , vol.180 , pp. 5375-5383
    • Ross, W.1    Aiyar, S.E.2    Salomon, J.3    Course, R.L.4
  • 48
    • 0027761839 scopus 로고
    • A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase
    • Ross W., Gosink K.K., Salomon J., Igarashi K., Zou C., Ishihama A., Severinov K., Gourse R.L. 1993. A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase. Science. 262, 1407-1413.
    • (1993) Science , vol.262 , pp. 1407-1413
    • Ross, W.1    Gosink, K.K.2    Salomon, J.3    Igarashi, K.4    Zou, C.5    Ishihama, A.6    Severinov, K.7    Gourse, R.L.8
  • 49
    • 0029756802 scopus 로고    scopus 로고
    • Transcription factor recognition surface on the RNA polymerase alpha subunit is involved in contact with the DNA enhancer element
    • Murakami K., Fujita N., Ishihama A. 1996. Transcription factor recognition surface on the RNA polymerase alpha subunit is involved in contact with the DNA enhancer element. EMBO J. 15, 4358-4367.
    • (1996) EMBO J. , vol.15 , pp. 4358-4367
    • Murakami, K.1    Fujita, N.2    Ishihama, A.3
  • 51
    • 0043032660 scopus 로고    scopus 로고
    • 70 region 4.2 and α subunit C-terminal domains in promoter complex formation on the extended -10 galP1 promoter
    • 70 region 4.2 and α subunit C-terminal domains in promoter complex formation on the extended -10 galP1 promoter. J. Biol. Chem. 278, 29710-29718.
    • (2003) J. Biol. Chem. , vol.278 , pp. 29710-29718
    • Minakhin, L.1    Severinov, K.2
  • 52
    • 0031027098 scopus 로고    scopus 로고
    • The -45 of the Escherichia coli lac promoter: CAP-dependent and CAP-independent transcription
    • Szarniecki D., Noel R.J., Reznikoff W.S. 1997. The -45 of the Escherichia coli lac promoter: CAP-dependent and CAP-independent transcription. J. Bacteriol. 179, 423-429.
    • (1997) J. Bacteriol. , vol.179 , pp. 423-429
    • Szarniecki, D.1    Noel, R.J.2    Reznikoff, W.S.3
  • 53
    • 0033978636 scopus 로고    scopus 로고
    • Transcription activation mediated by the carboxy-terminal domain of RNA polymerase α-subunit. Multipoint monitoring by fluorescent probe
    • Ozoline O.N., Fujita N., Ishihama A. 2000. Transcription activation mediated by the carboxy-terminal domain of RNA polymerase α-subunit. Multipoint monitoring by fluorescent probe. J. Biol. Chem. 275, 1119-1127.
    • (2000) J. Biol. Chem. , vol.275 , pp. 1119-1127
    • Ozoline, O.N.1    Fujita, N.2    Ishihama, A.3
  • 54
  • 55
    • 0029853258 scopus 로고    scopus 로고
    • RM promoter are sequence nonspecific and activate the promoter to a lesser extent than an introduced UP element to an rRNA promoter
    • RM promoter are sequence nonspecific and activate the promoter to a lesser extent than an introduced UP element to an rRNA promoter. J. Bacteriol. 178, 6945-6951.
    • (1996) J. Bacteriol. , vol.178 , pp. 6945-6951
    • Tang, Y.1    Murakami, K.2    Ishihama, A.3    DeHaseth, P.L.4
  • 56
    • 0035895434 scopus 로고    scopus 로고
    • Interaction of the C-terminal domain of the E. coli RNA polymerase alpha subunit with the UP element: Recognizing the backbone structure in the minor groove surface
    • Yasuno K., Yamazaki T., Tanaka Y., Kodama T.S., Matsugami A., Katahira M., Ishihama A., Kyogoku Y. 2001. Interaction of the C-terminal domain of the E. coli RNA polymerase alpha subunit with the UP element: recognizing the backbone structure in the minor groove surface. J. Mol. Biol. 306, 213-225
    • (2001) J. Mol. Biol. , vol.306 , pp. 213-225
    • Yasuno, K.1    Yamazaki, T.2    Tanaka, Y.3    Kodama, T.S.4    Matsugami, A.5    Katahira, M.6    Ishihama, A.7    Kyogoku, Y.8
  • 57
    • 0035945242 scopus 로고    scopus 로고
    • Mode of DNA-protein interaction between the C-terminal domain of Escherichia coli RNA polymerase subunit and T7D promoter UP element
    • Ozoline O.N., Fujita N., Ishihama A. 2001. Mode of DNA-protein interaction between the C-terminal domain of Escherichia coli RNA polymerase subunit and T7D promoter UP element. Nucleic Acids Res. 29, 4909-4919.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 4909-4919
    • Ozoline, O.N.1    Fujita, N.2    Ishihama, A.3
  • 58
    • 0034661711 scopus 로고    scopus 로고
    • Common fold in helix-haipin-helix proteins
    • Shao X., Grishin N.V. 2000. Common fold in helix-haipin-helix proteins. Nucleic Acids Res. 28, 2643-2650.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 2643-2650
    • Shao, X.1    Grishin, N.V.2
  • 59
    • 0031056544 scopus 로고    scopus 로고
    • The two α subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element
    • Murakami K., Kimura M., Owens J.T., Meares C.F., Ishihama A. 1997. The two α subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element. Proc. Natl. Acad. Sci. USA. 94, 1709-1714.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 1709-1714
    • Murakami, K.1    Kimura, M.2    Owens, J.T.3    Meares, C.F.4    Ishihama, A.5
  • 60
    • 0035281992 scopus 로고    scopus 로고
    • Fine structure of E. coli RNA polymerase-promoter interactions: Alpha subunit binding to the UP element minor groove
    • Ross W., Ernst A., Gourse R.L. 2001. Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove. Genes Dev. 15, 491-506.
    • (2001) Genes Dev. , vol.15 , pp. 491-506
    • Ross, W.1    Ernst, A.2    Gourse, R.L.3
  • 61
    • 84862442767 scopus 로고    scopus 로고
    • αCTD Dimerization: Structural determinants, biochemistry, and effects on UP-element dependent and activator-dependent transcription
    • Abstract 16
    • Chen H., Kapanidis A., Blatter E., Liu J., Parkinson G., Berman H., Ebright R.H. 2001. αCTD Dimerization: structural determinants, biochemistry, and effects on UP-element dependent and activator-dependent transcription. FASEB Summer Conf. (USA) Abstract book. Part 1. Abstract 16.
    • (2001) FASEB Summer Conf. (USA) Abstract Book , Issue.PART 1
    • Chen, H.1    Kapanidis, A.2    Blatter, E.3    Liu, J.4    Parkinson, G.5    Berman, H.6    Ebright, R.H.7
  • 62
    • 0032522870 scopus 로고    scopus 로고
    • Monitoring of RNA polymerase-DNA UP element interaction by a fluorescent probe conjugated to α subunit
    • Ozoline O.N., Fujita N., Murakami K., Ishihama A. 1998. Monitoring of RNA polymerase-DNA UP element interaction by a fluorescent probe conjugated to α subunit. Eur. J. Biochem. 253, 371-381.
    • (1998) Eur. J. Biochem. , vol.253 , pp. 371-381
    • Ozoline, O.N.1    Fujita, N.2    Murakami, K.3    Ishihama, A.4
  • 64
    • 0032575760 scopus 로고    scopus 로고
    • Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn
    • Young M.A., Beveridge D.L. 1998. Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn. J. Mol. Biol. 281, 675-687.
    • (1998) J. Mol. Biol. , vol.281 , pp. 675-687
    • Young, M.A.1    Beveridge, D.L.2
  • 66
    • 0024383750 scopus 로고
    • Saturation mutagenesis of an Escherichia coli rRNA promoter and initial characterization of promoter variants
    • Gaal T., Barkei J., Dickson R.R., deBoer H.A., deHaseth P.L., Alavi H., Gourse R.L. 1989. Saturation mutagenesis of an Escherichia coli rRNA promoter and initial characterization of promoter variants. J. Bacteriol. 171, 4852-4861.
    • (1989) J. Bacteriol. , vol.171 , pp. 4852-4861
    • Gaal, T.1    Barkei, J.2    Dickson, R.R.3    DeBoer, H.A.4    DeHaseth, P.L.5    Alavi, H.6    Gourse, R.L.7
  • 67
    • 0035812654 scopus 로고    scopus 로고
    • Intrinsic bending and deformability at the T-A step of CCTT-TAAAGG: A comparative analysis of T-A and A-T steps within A-tracts
    • Mack D.R., Chiu T.K., Dickerson R.E. 2001. Intrinsic bending and deformability at the T-A step of CCTT-TAAAGG: a comparative analysis of T-A and A-T steps within A-tracts. J. Mol. Biol. 312, 1037-1049.
    • (2001) J. Mol. Biol. , vol.312 , pp. 1037-1049
    • Mack, D.R.1    Chiu, T.K.2    Dickerson, R.E.3
  • 68
    • 0034717021 scopus 로고    scopus 로고
    • The structure and the characteristic DNA binding property of the C-terminal domain of the RNA polymerase α subunit from Thermus thermophilus
    • Wada T., Yamazaki T., Kyogoku Y. 2000. The structure and the characteristic DNA binding property of the C-terminal domain of the RNA polymerase α subunit from Thermus thermophilus. J. Biol. Chem. 275, 16057-16063.
    • (2000) J. Biol. Chem. , vol.275 , pp. 16057-16063
    • Wada, T.1    Yamazaki, T.2    Kyogoku, Y.3
  • 69
    • 0030686456 scopus 로고    scopus 로고
    • Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by E. coli RNA polymerase
    • Ozoline O.N., Deev A.A., Arkhipova M.V. 1997. Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by E. coli RNA polymerase. Nucleic Acids Res. 25, 4703-4709.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4703-4709
    • Ozoline, O.N.1    Deev, A.A.2    Arkhipova, M.V.3
  • 70
    • 0030867901 scopus 로고    scopus 로고
    • Positioning of two alpha subunit carboxy-terminal domains of RNA polymerase at promoters by two transcription factors
    • Murakami K., Owens J.T., Belyaeva T.A., Meares C.F., Busby S.J.W., Ishihama A. 1997. Positioning of two alpha subunit carboxy-terminal domains of RNA polymerase at promoters by two transcription factors. Proc. Natl. Acad. Sci. USA. 94, 11274-11278.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 11274-11278
    • Murakami, K.1    Owens, J.T.2    Belyaeva, T.A.3    Meares, C.F.4    Busby, S.J.W.5    Ishihama, A.6
  • 71
    • 0032502838 scopus 로고    scopus 로고
    • Transcription activation at promoters carrying tandem DNA sites for the Escherichia coli cyclic AMP receptor protein: Organization of the RNA polymerase α subunits
    • Belyaeva T.A., Rhodius V.A., Webster C.L., Busby S.J.W. 1998. Transcription activation at promoters carrying tandem DNA sites for the Escherichia coli cyclic AMP receptor protein: organization of the RNA polymerase α subunits. J. Mol. Biol. 277, 789-804.
    • (1998) J. Mol. Biol. , vol.277 , pp. 789-804
    • Belyaeva, T.A.1    Rhodius, V.A.2    Webster, C.L.3    Busby, S.J.W.4
  • 72
    • 0034625251 scopus 로고    scopus 로고
    • Structural organization of the RNA polymerase-promoter open complex
    • Naryshkin N., Revyakin A., Kim Y., Mekler V., Ebright R.H. 2000. Structural organization of the RNA polymerase-promoter open complex. Cell. 101, 601-611.
    • (2000) Cell , vol.101 , pp. 601-611
    • Naryshkin, N.1    Revyakin, A.2    Kim, Y.3    Mekler, V.4    Ebright, R.H.5
  • 74
    • 0028090563 scopus 로고
    • Interactions between the cyclic AMP receptor protein and the alpha subunit of RNA polymerase at the Escherichia coli galactose operon P1 promoter
    • Attey A., Belyaeva T., Savery N., Hoggett J., Fujita N., Ishihama A., Busby S. 1994. Interactions between the cyclic AMP receptor protein and the alpha subunit of RNA polymerase at the Escherichia coli galactose operon P1 promoter. Nucleic Acids Res. 22, 4375-4380.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4375-4380
    • Attey, A.1    Belyaeva, T.2    Savery, N.3    Hoggett, J.4    Fujita, N.5    Ishihama, A.6    Busby, S.7
  • 75
    • 0029149655 scopus 로고
    • RNA polymerase α subunit binding site in positively controlled promoters: A new model for RNA polymerase-promoter interaction and transcriptional activation in the Escherichia coli ada and aidB genes
    • Landini P., Volkert M. 1995. RNA polymerase α subunit binding site in positively controlled promoters: a new model for RNA polymerase-promoter interaction and transcriptional activation in the Escherichia coli ada and aidB genes. EMBO J. 14, 4329-4335.
    • (1995) EMBO J. , vol.14 , pp. 4329-4335
    • Landini, P.1    Volkert, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.