Modulation of the Escherichia coli σ(E) (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins

Molecular Microbiology

Volumn 24, Issue 2, 1997, Pages 355-371

  Missiakas, Dominique ^a   Mayer, Matthias P ^b   Lemaire, Marc ^b   Georgopoulos, Costa ^b   Raina, Satish ^b  

^a CNRS   (France)

^b UNIVERSITY OF GENEVA MEDICAL SCHOOL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; HEAT SHOCK PROTEIN; TRANSCRIPTION FACTOR;

ARTICLE; BACTERIAL OUTER MEMBRANE; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; NONHUMAN; PRIORITY JOURNAL; REGULON; TRANSCRIPTION REGULATION;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0030907038     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.1997.3601713.x     Document Type: Article

References (51)

1. Alper, S., Duncan, L., and Losick, R. (1994) An adenosine nucleotide switch controlling the activity of a cell type-specific transcription factor in B. subtilis. Cell 77: 195-205.
2. Bartel, P.L., Chien, C.-T., Sternglanz, R., and Fields, S. (1993) Using the two-hybrid system to detect protein-protein interactions. In Cellular Interactions in Development: A Practical Approach. Hartley, D.A. (ed.). Oxford: Oxford University Press, pp. 153-179.
3. Brown, K.L., and Hughes, K.T. (1995) The role of anti-sigma factors in gene regulation. Mol Microbiol 16: 397-404.
4. Burgess, R.R., and Jendrisak, J.J. (1975) A procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography. Biochem 14: 4634-4638.
5. Casadaban, M.J. (1976) Transposition and fusion of the lac genes to selected promoters of Escherichia coli using bacteriophage λ and Mu. J Mol Biol 104: 541-555.
6. Chevrey, P.M., and Nathans, D. (1992) Protein interaction cloning in yeast: identification of mammalian proteins that react with the leucine zipper of Jun. Proc Natl Acad Sci USA 89: 5789-5793.
7. Chi, E., and Bartlett, D.H. (1995) An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Phofobacterium sp. strain SS9. Mol Microbiol 17: 713-726.
8. Derman, A.I., and Beckwith, J. (1991) Escherichia coli alkaline phosphatase fails to acquire disulphide bonds when retained in the cytoplasm. J Bacteriol 173: 7719-7722.
9. Diederich, B., Wilkinson, J.F., Magnin, T., Najafi, M., Erringston, J., and Yudkin, M.D. (1994) Role of interactions between SpollAA and SpollAB in regulating cell-specific transcription factor sigma F of Bacillus subtilis. Genes Dev 8: 2653-2663.
10. Dufour, A., and Haldenwang, W.G. (1994) Interactions between a Bacillus subtilis anti-sigma factor (RsbW) and its antagonist (RsbV). J Bacteriol 176: 1813-1820.
11. E subunit of Escherichia coli RNA polymerase; a second alternate σ factor involved in high temperature gene expression. Genes Dev 3: 1462-1471.
12. Estojak, J., Brent, R., and Golemis, E.A. (1995) Correlation of two-hybrid affinity data with in vitro measurements. Mol Cell Biol 15: 5820-5829.
13. Fellay, R., Frey, J., and Krisch, H. (1987) Interposon mutagenesis of soil and water bacteria: a family of DNA fragments designed for in vitro insertional mutagenesis of Gram-negative bacteria. Gene 52: 147-154.
14. Feilotter, H.E., Hannon, G.J., Ruddell, C.J., and Beach, D. (1994) Construction of an improved host strain for the two hybrid screening. Nucleic Acids Res 22: 1502-1503.
15. Fields, S., and Song, O. (1989) A novel genetic system to detect protein-protein interactions. Nature 340: 245-246.
16. Finley, R., and Brent, R. (1994) Interaction mating reveals binary and ternary connections between Drosophila cell cycle regulators. Proc Natl Acad Sci USA 91: 12980-12984.
17. Fleishmann, R.D., et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269: 496-512.
18. Gorham, H.C., McGowan, S.J., Robson, P.R.H., and Hodgson, D.A. (1996) Light-induced carotenogenesis in Myxococcus xanthus: light-dependent membrane sequestration of ECF sigma factor CarQ by anti-sigma factor CarR. Mol Microbiol 19: 171-186.
19. Gross, C.A. (1996) Function and regulation of the heat shock proteins. In Escherichia coli and Salmonella: Cellular and Molecular Biology. Neidhardt, F.C. et al. Washington DC: American Society for Microbiology, pp. 1382-1399.
20. Grossman, A.D., Erickson, J.W., and Gross, C.A. (1984) The htpR gene product of E. coli is a sigma factor for heat-shock promoters. Cell 38: 383-390.
21. Gutierrez, C., and Devedjian, J.C. (1989) A plasmid facilitating in vitro construction of phoA gene fusions in Escherichia coli. Nucleic Acids Res 17: 3999.
22. Guzman, L.M., Belin, D., Carson, M.J., and Beckwith, J. (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose pBAD promoter. J Bacteriol 177: 4121-4130.
23. S as a global regulator in the osmotic control of gene expression in Escherichia coli. Mol Microbiol 21: 887-894.
24. Kohara, Y., Akiyama, K., and Isono, K. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50: 495-508.
25. Lipinska, B., Sharma, S., and Georgopoulos, C. (1988) Sequence analysis and regulation of the htrA gene of Escherichia coli: a sigma 32-independent mechanism of heat-inducible transcription. Nucleic Acids Res 16: 10053-10067.
26. Lonetto, M., Brown, K.L., Rudd, K.E., and Buttner, M.J. (1994) Analysis of the Streptomyces coelicolor sigma-E gene reveals the existence of a subfamily of Eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions. Proc Natl Acad Sci USA 91: 7573-7577.
27. Lupas, A., Van Dyke, M., and Stock, J. (1991) Predicting coiled coils from protein sequences. Science 252: 1162-1164.
28. Ma, J., and Ptashne, M. (1987) A new class of yeast transcriptional activators. Cell 51: 113-119.
29. Manoil, C., and Beckwith, J. (1985) TnphoA: a transposon probe for protein export signals. Proc Natl Acad Sci USA 82: 8129-8133.
30. E, an Escherichia coli heat-inducible sigma factor, is modulated by expression of outer membrane proteins. Genes Dev 7: 2618-2628.
31. Miller, J. (1992) A Short Course in Bacterial Genetics: A Laboratory Manual and Handbook for Escherichia coli and Related Bacteria. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
32. Missiakas, D., and Raina, S. (1997a) Protein misfolding in the cell envelope of Escherichia coli: new signaling pathways. Trends Biochem Sci 22: 59-64.
33. Missiakas, D., and Raina, S. (1997b) Signal transduction pathways in response to protein misfolding in the extracytoplasmic compartments of E. coli: role of two new phosphoprotein phosphatases PrpA and PrpB. EMBO J 16: 1670-1685.
34. Missiakas, D., Georgopoulos, C., and Raina, S. (1993a) The Escherichia coli heat shock gene htpY: mutational analysis, cloning, sequencing, and transcriptional regulation. J Bacteriol 175: 2613-2624.
35. Missiakas, D., Georgopoulos, C., and Raina, S. (1993b) Identification and characterization of the Escherichia coli dsbB gene, whose product is involved in the formation of disulphide bonds in vivo. Proc Natl Acad Sci USA 90: 7084-7088.
36. Missiakas, D., Raina, S., and Georgopoulos, C. (1996a) The heat shock regulation. In Regulation of Gene Expression in Escherichia coli. Lin, E.C.C., and Lynch, S.A. (eds). Austin, Texas: R.G. Landes Company, pp. 481-501.
37. Missiakas, D., Betton, J.-M., and Raina, S. (1996b) New components of protein folding in the extra-cytoplasmic compartments of Escherichia coli: SurA, FkpA and Skp/ OmpH. Mol Microbiol 21: 871-884.
38. Nakai, K., and Kanehisa, M. (1991) Expert system for predicting protein localization sites in Gram-negative bacteria. Proteins 11: 95-110.
39. Neu, H.C., and Heppel, L.A. (1965) The release of enzymes from Escherichia coli by osmotic shock and during the formation of sphaeroplasts. J Biol Chem 240: 3685-3692.
40. Prossnitz, E., Nikaido, K., Ulbrich, S.J., and Ames, G.F.-L. (1988) Formaldehyde and photoactivatable cross-linking of the periplasmic binding protein to a membrane component of the histidine transport system of Salmonella typhimurium. J Biol Chem 263: 17917-17920.
41. Raina, S., and Georgopoulos, C. (1990) A new Escherichia coli heat shock gene, htrC: whose product is essential for viability only at high temperatures. J Bacteriol 172: 3417-3426.
42. 24) heat shock sigma factor of Escherichia coli. EMBO J 14: 1043-1055.
43. E, in Escherichia coli. EMBO J 14: 1032-1042.
44. Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
45. Schurr, M.J., Yu, H., Martinez-Salazar, J.M., Boucher, J.C., and Deretic, V. (1996) Control of AlgU, a member of the sigma E-like family of stress sigma factors, by the negative regulators MucA and MucB and Pseudomonas aeruginosa conversion to mucoidy in cystic fibrosis. J Bacteriol 178: 4997-5004.
46. Skare, J.T., Ahmer, B.M.M., Seachord, C.L., Darveau, R.P., and Postle, K. (1993) Energy transduction between membranes. TonB, a cytoplasmic membrane protein, can be chemically cross-linked in vivo to the outer membrane receptor FepA. J Biol Chem 268: 16302-16308.
47. Studier, F.W., and Moffatt, B.A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189: 113-130.
48. Wang, Q., and Kaguni, J.M. (1989) A novel sigma factor is involved in expression of the rpoH gene of Escherichia coli. J Bacteriol 171: 4248-4253.
49. Way, J.C., Davis, M.A., Morisato, D., Roberts, D.E., and Kleckner, N. (1984) New Tn10 derivatives for transposon mutagenesis and for construction of lacZ operon fusions by transposition. Gene 32: 369-379.
50. Xie, Z.-D., Hershberger, D., Shankar, S., Ye, R.W., and Chakrabarty, A.M. (1996) Sigma factor-anti-sigma factor interaction in alginate synthesis: inhibition of AlgT by MucA. J Bacteriol 178: 4990-4996.
51. Yura, T., Nagai, H., and Mori, H. (1993) Regulation of the heat-shock response in bacteria. Annu Rev Microbiol 47: 321-350.