-
1
-
-
0037154982
-
A unified theory of gene expression
-
A comprehensive review on gene expression with an emphasis on the interrelatedness of various phases in gene expression.
-
Orphanides G., Reinberg D. A unified theory of gene expression. Cell. 108:2002;439-451 A comprehensive review on gene expression with an emphasis on the interrelatedness of various phases in gene expression.
-
(2002)
Cell
, vol.108
, pp. 439-451
-
-
Orphanides, G.1
Reinberg, D.2
-
2
-
-
0037154967
-
Integrating mRNA processing with transcription
-
A review on mRNA-processing reactions, crosstalk among the processing reactions and the coordination of RNA processing with transcription.
-
Proudfoot N.J., Furger A., Dye M.J. Integrating mRNA processing with transcription. Cell. 108:2002;501-512 A review on mRNA-processing reactions, crosstalk among the processing reactions and the coordination of RNA processing with transcription.
-
(2002)
Cell
, vol.108
, pp. 501-512
-
-
Proudfoot, N.J.1
Furger, A.2
Dye, M.J.3
-
3
-
-
0030753073
-
The role of the cap structure in RNA processing and nuclear export
-
Lewis J.D., Izaurralde E. The role of the cap structure in RNA processing and nuclear export. Eur J Biochem. 247:1997;461-469.
-
(1997)
Eur J Biochem
, vol.247
, pp. 461-469
-
-
Lewis, J.D.1
Izaurralde, E.2
-
4
-
-
0031610367
-
U1 snRNP inhibits pre-mRNA polyadenylation through a direct interaction between U1 70K and poly(A) polymerase
-
Gunderson S.I., Polycarpou-Schwarz M., Mattaj I.W. U1 snRNP inhibits pre-mRNA polyadenylation through a direct interaction between U1 70K and poly(A) polymerase. Mol Cell. 1:1998;255-264.
-
(1998)
Mol Cell
, vol.1
, pp. 255-264
-
-
Gunderson, S.I.1
Polycarpou-Schwarz, M.2
Mattaj, I.W.3
-
5
-
-
0034008058
-
The carboxyl terminus of vertebrate poly(A) polymerase interacts with U2AF 65 to couple 3′-end processing and splicing
-
Vagner S., Vagner C., Mattaj I.W. The carboxyl terminus of vertebrate poly(A) polymerase interacts with U2AF 65 to couple 3′-end processing and splicing. Genes Dev. 14:2000;403-413.
-
(2000)
Genes Dev
, vol.14
, pp. 403-413
-
-
Vagner, S.1
Vagner, C.2
Mattaj, I.W.3
-
6
-
-
0034699472
-
The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans
-
Zhou Z., Luo M.-j., Straesser K., Katahira J., Hurt E., Reed R. The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans. Nature. 407:2000;401-405.
-
(2000)
Nature
, vol.407
, pp. 401-405
-
-
Zhou, Z.1
Luo, M-J.2
Straesser, K.3
Katahira, J.4
Hurt, E.5
Reed, R.6
-
7
-
-
0030731419
-
Starting at the beginning, middle, and end: Translation initiation in eukaryotes
-
Sachs A.B., Sarnow P., Hentze M.W. Starting at the beginning, middle, and end: translation initiation in eukaryotes. Cell. 89:1997;831-838.
-
(1997)
Cell
, vol.89
, pp. 831-838
-
-
Sachs, A.B.1
Sarnow, P.2
Hentze, M.W.3
-
10
-
-
0028129989
-
Conserved structures and diversity of functions of RNA-binding proteins
-
Burd C.G., Dreyfuss G. Conserved structures and diversity of functions of RNA-binding proteins. Science. 265:1994;615-621.
-
(1994)
Science
, vol.265
, pp. 615-621
-
-
Burd, C.G.1
Dreyfuss, G.2
-
11
-
-
0037711199
-
The dsRNA binding protein family: Critical roles, diverse cellular functions
-
Saunders L.R., Barber G.N. The dsRNA binding protein family: critical roles, diverse cellular functions. FASEB J. 17:2003;961-983.
-
(2003)
FASEB J
, vol.17
, pp. 961-983
-
-
Saunders, L.R.1
Barber, G.N.2
-
12
-
-
0036464536
-
Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana
-
Lorkovic Z.J., Barta A. Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana. Nucleic Acids Res. 30:2002;623-635.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 623-635
-
-
Lorkovic, Z.J.1
Barta, A.2
-
13
-
-
0033133554
-
FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering
-
Michaels S.D., Amasino R.M. FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering. Plant Cell. 11:1999;949-956.
-
(1999)
Plant Cell
, vol.11
, pp. 949-956
-
-
Michaels, S.D.1
Amasino, R.M.2
-
14
-
-
0033101487
-
The FLF MADS box gene: A repressor of flowering in Arabidopsis regulated by vernalization and methylation
-
Sheldon C.C., Burn J.E., Perez P.P., Metzger J., Edwards J.A., Peacock W.J., Dennis E.S. The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation. Plant Cell. 11:1999;445-458.
-
(1999)
Plant Cell
, vol.11
, pp. 445-458
-
-
Sheldon, C.C.1
Burn, J.E.2
Perez, P.P.3
Metzger, J.4
Edwards, J.A.5
Peacock, W.J.6
Dennis, E.S.7
-
15
-
-
0037066492
-
Arabidopsis, the Rosetta stone of flowering time?
-
Simpson G.G., Dean C. Arabidopsis, the Rosetta stone of flowering time? Science. 296:2002;285-289.
-
(2002)
Science
, vol.296
, pp. 285-289
-
-
Simpson, G.G.1
Dean, C.2
-
16
-
-
0030696674
-
FCA, a gene controlling flowering time in Arabidopsis, encodes a protein containing RNA-binding domains
-
Macknight R., Bancroft I., Page T., Lister C., Schmidt R., Love K., Westphal L., Murphy G., Sherson S., Cobbett C.et al. FCA, a gene controlling flowering time in Arabidopsis, encodes a protein containing RNA-binding domains. Cell. 89:1997;737-745.
-
(1997)
Cell
, vol.89
, pp. 737-745
-
-
MacKnight, R.1
Bancroft, I.2
Page, T.3
Lister, C.4
Schmidt, R.5
Love, K.6
Westphal, L.7
Murphy, G.8
Sherson, S.9
Cobbett, C.10
-
17
-
-
0035999375
-
Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA
-
FCA gives rise to four transcripts, α, β, γ, and δ, because of alternative transcript processing. This work demonstrates that only the γ form makes the functional FCA protein, and that FCA introns are important for the temporally and spatially restricted patterns of FCA expression.
-
Macknight R., Duroux M., Laurie R., Dijkwel P., Simpson G., Dean C. Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA. Plant Cell. 14:2002;877-888 FCA gives rise to four transcripts, α, β, γ, and δ, because of alternative transcript processing. This work demonstrates that only the γ form makes the functional FCA protein, and that FCA introns are important for the temporally and spatially restricted patterns of FCA expression.
-
(2002)
Plant Cell
, vol.14
, pp. 877-888
-
-
MacKnight, R.1
Duroux, M.2
Laurie, R.3
Dijkwel, P.4
Simpson, G.5
Dean, C.6
-
18
-
-
0038037805
-
Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time
-
The authors demonstrate that FCA negatively regulates its own expression by promoting pre-mature polyadenylation within intron 3. This negative regulation is important for the temporal and spatial patterns of FCA expression, and is likely a mechanism to limit the amount of FCA protein in order to prevent precocious flowering.
-
Quesada V., Macknight R., Dean C., Simpson G.G. Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time. EMBO J. 22:2003;3142-3152 The authors demonstrate that FCA negatively regulates its own expression by promoting pre-mature polyadenylation within intron 3. This negative regulation is important for the temporal and spatial patterns of FCA expression, and is likely a mechanism to limit the amount of FCA protein in order to prevent precocious flowering.
-
(2003)
EMBO J
, vol.22
, pp. 3142-3152
-
-
Quesada, V.1
MacKnight, R.2
Dean, C.3
Simpson, G.G.4
-
19
-
-
0038343397
-
FY is an RNA 3′ end-processing factor that interacts with FCA to control the Arabidopsis floral transition
-
FY is a gene in the autonomous floral promotion pathway. In this work, the authors isolated the FY gene through a combination of genetic and biochemical approaches. FCA, via its WW domain, interacts with FY, a protein that has similarity to the yeast cleavage and polyadenylation factor Pfs2p.
-
Simpson G.G., Dijkwel P.P., Quesada V., Henderson I., Dean C. FY is an RNA 3′ end-processing factor that interacts with FCA to control the Arabidopsis floral transition. Cell. 113:2003;777-787 FY is a gene in the autonomous floral promotion pathway. In this work, the authors isolated the FY gene through a combination of genetic and biochemical approaches. FCA, via its WW domain, interacts with FY, a protein that has similarity to the yeast cleavage and polyadenylation factor Pfs2p.
-
(2003)
Cell
, vol.113
, pp. 777-787
-
-
Simpson, G.G.1
Dijkwel, P.P.2
Quesada, V.3
Henderson, I.4
Dean, C.5
-
20
-
-
0034949084
-
FPA, a gene involved in floral induction in Arabidopsis, encodes a protein containing RNA-recognition motifs
-
Schomburg F.M., Patton D.A., Meinke D.W., Amasino R.M. FPA, a gene involved in floral induction in Arabidopsis, encodes a protein containing RNA-recognition motifs. Plant Cell. 13:2001;1427-1436.
-
(2001)
Plant Cell
, vol.13
, pp. 1427-1436
-
-
Schomburg, F.M.1
Patton, D.A.2
Meinke, D.W.3
Amasino, R.M.4
-
21
-
-
0034724421
-
The molecular basis of vernalization: The central role of FLOWERING LOCUS C (FLC)
-
Sheldon C.C., Rouse D.T., Finnegan E.J., Peacock W.J., Dennis E.S. The molecular basis of vernalization: the central role of FLOWERING LOCUS C (FLC). Proc Natl Acad Sci USA. 97:2000;3753-3758.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 3753-3758
-
-
Sheldon, C.C.1
Rouse, D.T.2
Finnegan, E.J.3
Peacock, W.J.4
Dennis, E.S.5
-
22
-
-
0037738567
-
HASTY, the Arabidopsis ortholog of exportin 5/MSN5, regulates phase change and morphogenesis
-
This work demonstrates that HST is the ortholog of mammalian exportin 5 and suggests that the nucleocytoplasmic transport of certain molecules may be a limiting step in vegetative phase change. In addition, the authors show that potential null mutants of HST are viable.
-
Bollman K.M., Aukerman M.J., Park M.Y., Hunter C., Berardini T.Z., Poethig R.S. HASTY, the Arabidopsis ortholog of exportin 5/MSN5, regulates phase change and morphogenesis. Development. 130:2003;1493-1504 This work demonstrates that HST is the ortholog of mammalian exportin 5 and suggests that the nucleocytoplasmic transport of certain molecules may be a limiting step in vegetative phase change. In addition, the authors show that potential null mutants of HST are viable.
-
(2003)
Development
, vol.130
, pp. 1493-1504
-
-
Bollman, K.M.1
Aukerman, M.J.2
Park, M.Y.3
Hunter, C.4
Berardini, T.Z.5
Poethig, R.S.6
-
23
-
-
0041888473
-
PAUSED encodes the Arabidopsis exportin-t ortholog
-
The authors show that Arabidopsis PSD cDNA can partially rescue the yeast los1 (exportin t) mutant phenotype and that potential psd null alleles, even when combined with a potential hst null allele, are viable.
-
Hunter C.A., Aukerman M.J., Sun H., Fokina M., Poethig R.S. PAUSED encodes the Arabidopsis exportin-t ortholog. Plant Physiol. 132:2003;2135-2143 The authors show that Arabidopsis PSD cDNA can partially rescue the yeast los1 (exportin t) mutant phenotype and that potential psd null alleles, even when combined with a potential hst null allele, are viable.
-
(2003)
Plant Physiol
, vol.132
, pp. 2135-2143
-
-
Hunter, C.A.1
Aukerman, M.J.2
Sun, H.3
Fokina, M.4
Poethig, R.S.5
-
24
-
-
0037033792
-
Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins
-
Brownawell A.M., Macar I.G. Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins. J Cell Biol. 156:2002;53-64.
-
(2002)
J Cell Biol
, vol.156
, pp. 53-64
-
-
Brownawell, A.M.1
MacAr, I.G.2
-
25
-
-
0037458712
-
Exportin-5 mediates nuclear export of minihelix-containing RNAs
-
The authors show that exportin-5 mediates the export of RNAs that have structural features similar to those of microRNA precursors.
-
Gwizdek C., Ossareh-Nazari B., Brownawell A.M., Doglio A., Bertrand E., Macara I.G., Dargemont C. Exportin-5 mediates nuclear export of minihelix-containing RNAs. J Biol Chem. 278:2003;5505-5508 The authors show that exportin-5 mediates the export of RNAs that have structural features similar to those of microRNA precursors.
-
(2003)
J Biol Chem
, vol.278
, pp. 5505-5508
-
-
Gwizdek, C.1
Ossareh-Nazari, B.2
Brownawell, A.M.3
Doglio, A.4
Bertrand, E.5
MacAra, I.G.6
Dargemont, C.7
-
26
-
-
0031990346
-
Identification of a tRNA-specific nuclear export receptor
-
Kutay U., Lipowsky G., Izaurralde E., Bischoff F.R., Schwarzmaier P., Hartmann E., Gorlich D. Identification of a tRNA-specific nuclear export receptor. Mol Cell. 1:1998;359-369.
-
(1998)
Mol Cell
, vol.1
, pp. 359-369
-
-
Kutay, U.1
Lipowsky, G.2
Izaurralde, E.3
Bischoff, F.R.4
Schwarzmaier, P.5
Hartmann, E.6
Gorlich, D.7
-
27
-
-
0041464459
-
PAUSED, a putative exportin-t, acts pleiotropically in Arabidopsis development but is dispensable for viability
-
The authors demonstrate that a psd null allele is viable and that AG expression is reduced in psd mutants.
-
Li J., Chen X. PAUSED, a putative exportin-t, acts pleiotropically in Arabidopsis development but is dispensable for viability. Plant Physiol. 132:2003;1913-1924 The authors demonstrate that a psd null allele is viable and that AG expression is reduced in psd mutants.
-
(2003)
Plant Physiol
, vol.132
, pp. 1913-1924
-
-
Li, J.1
Chen, X.2
-
28
-
-
0024301235
-
Genes directing flower development in Arabidopsis
-
Bowman J.L., Smyth D.R., Meyerowitz E.M. Genes directing flower development in Arabidopsis. Plant Cell. 1:1989;37-52.
-
(1989)
Plant Cell
, vol.1
, pp. 37-52
-
-
Bowman, J.L.1
Smyth, D.R.2
Meyerowitz, E.M.3
-
29
-
-
0033105820
-
HUA1 and HUA2 are two members of the floral homeotic AGAMOUS pathway
-
Chen X., Meyerowitz E.M. HUA1 and HUA2 are two members of the floral homeotic AGAMOUS pathway. Mol Cell. 3:1999;349-360.
-
(1999)
Mol Cell
, vol.3
, pp. 349-360
-
-
Chen, X.1
Meyerowitz, E.M.2
-
30
-
-
0036339614
-
HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower
-
Chen X., Liu J., Cheng Y., Jia D. HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower. Development. 129:2002;1085-1094.
-
(2002)
Development
, vol.129
, pp. 1085-1094
-
-
Chen, X.1
Liu, J.2
Cheng, Y.3
Jia, D.4
-
31
-
-
0036332994
-
HUA ENHANCER2, a putative DexH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis
-
Western T.L., Cheng Y., Jun L., Chen X. HUA ENHANCER2, a putative DexH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis. Development. 129:2002;1569-1581.
-
(2002)
Development
, vol.129
, pp. 1569-1581
-
-
Western, T.L.1
Cheng, Y.2
Jun, L.3
Chen, X.4
-
32
-
-
0037239887
-
Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana
-
The authors demonstrate that HEN4 encodes a KH-domain protein that interacts with HUA1, a CCCH zinc-finger RNA-binding protein. HUA1, HUA2, and HEN4 either promote the splicing of or prevent pre-mature polyadenylation within the second intron of AG.
-
Cheng Y., Kato N., Wang W., Li J., Chen X. Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana. Dev Cell. 4:2003;53-66 The authors demonstrate that HEN4 encodes a KH-domain protein that interacts with HUA1, a CCCH zinc-finger RNA-binding protein. HUA1, HUA2, and HEN4 either promote the splicing of or prevent pre-mature polyadenylation within the second intron of AG.
-
(2003)
Dev Cell
, vol.4
, pp. 53-66
-
-
Cheng, Y.1
Kato, N.2
Wang, W.3
Li, J.4
Chen, X.5
-
33
-
-
0032499774
-
Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association
-
Steinmetz E.J., Brow D.A. Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association. Proc Natl Acad Sci USA. 95:1998;6699-6704.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 6699-6704
-
-
Steinmetz, E.J.1
Brow, D.A.2
-
34
-
-
0035921929
-
RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts
-
Steinmetz E.J., Conrad N.K., Brow D.A., Corden J.L. RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts. Nature. 413:2001;327-331.
-
(2001)
Nature
, vol.413
, pp. 327-331
-
-
Steinmetz, E.J.1
Conrad, N.K.2
Brow, D.A.3
Corden, J.L.4
-
35
-
-
0029959435
-
The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins
-
Yuryev A., Patturajan M., Litingtung Y., Joshi R.V., Gentile C., Gebara M., Corden J.L. The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins. Proc Natl Acad Sci USA. 93:1996;6975-6980.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 6975-6980
-
-
Yuryev, A.1
Patturajan, M.2
Litingtung, Y.3
Joshi, R.V.4
Gentile, C.5
Gebara, M.6
Corden, J.L.7
-
36
-
-
0034761750
-
HUA1, a regulator of stamen and carpel identities in Arabidopsis, codes for a nuclear RNA binding protein
-
Li J., Jia D., Chen X. HUA1, a regulator of stamen and carpel identities in Arabidopsis, codes for a nuclear RNA binding protein. Plant Cell. 13:2001;2269-2281.
-
(2001)
Plant Cell
, vol.13
, pp. 2269-2281
-
-
Li, J.1
Jia, D.2
Chen, X.3
-
37
-
-
0032481316
-
Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3′ end formation of 5.8S rRNA in Saccharomyces cerevisiae
-
de la Cruz J., Kressler D., Tollervey D., Linder P. Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3′ end formation of 5.8S rRNA in Saccharomyces cerevisiae. EMBO J. 17:1998;1128-1140.
-
(1998)
EMBO J
, vol.17
, pp. 1128-1140
-
-
De La Cruz, J.1
Kressler, D.2
Tollervey, D.3
Linder, P.4
-
38
-
-
0036469214
-
The yin and yang of the exosome
-
Butler J.S. The yin and yang of the exosome. Trends Cell Biol. 12:2002;90-96.
-
(2002)
Trends Cell Biol
, vol.12
, pp. 90-96
-
-
Butler, J.S.1
-
39
-
-
0037015239
-
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana
-
Park W., Li J., Song R., Messing J., Chen X. CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Curr Biol. 12:2002;1484-1495.
-
(2002)
Curr Biol
, vol.12
, pp. 1484-1495
-
-
Park, W.1
Li, J.2
Song, R.3
Messing, J.4
Chen, X.5
-
40
-
-
0036779320
-
RNA-binding proteins in plants: The tip of an iceberg?
-
Fedoroff N.V. RNA-binding proteins in plants: the tip of an iceberg? Curr Opin Plant Biol. 5:2002;452-459.
-
(2002)
Curr Opin Plant Biol
, vol.5
, pp. 452-459
-
-
Fedoroff, N.V.1
-
41
-
-
0034485822
-
A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin
-
Lu C., Fedoroff N. A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin. Plant Cell. 12:2000;2351-2366.
-
(2000)
Plant Cell
, vol.12
, pp. 2351-2366
-
-
Lu, C.1
Fedoroff, N.2
-
42
-
-
0035943427
-
An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis
-
Hugouvieux V., Kwak J.M., Schroeder J.I. An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis. Cell. 106:2001;477-487.
-
(2001)
Cell
, vol.106
, pp. 477-487
-
-
Hugouvieux, V.1
Kwak, J.M.2
Schroeder, J.I.3
-
43
-
-
0035654544
-
Modulation of abscisic acid signal transduction and biosynthesis by an Sm-like protein in Arabidopsis
-
Xiong L., Gong Z., Rock C.D., Subramanian S., Guo Y., Xu W., Galbraith D., Zhu J.K. Modulation of abscisic acid signal transduction and biosynthesis by an Sm-like protein in Arabidopsis. Dev Cell. 1:2001;771-781.
-
(2001)
Dev Cell
, vol.1
, pp. 771-781
-
-
Xiong, L.1
Gong, Z.2
Rock, C.D.3
Subramanian, S.4
Guo, Y.5
Xu, W.6
Galbraith, D.7
Zhu, J.K.8
-
44
-
-
0037102432
-
Modulation of an RNA-binding protein by abscisic-acid-activated protein kinase
-
The authors identify AKIP, a hnRNP-like protein, as a substrate of ABA-activated protein kinase and show that the phosphorylation of AKIP alters its subcellular localization patterns and RNA-binding specificity.
-
Li J., Kinoshita T., Pandey S., Ng C.K., Gygi S.P., Shimazaki K., Assmann S.M. Modulation of an RNA-binding protein by abscisic-acid-activated protein kinase. Nature. 418:2002;793-797 The authors identify AKIP, a hnRNP-like protein, as a substrate of ABA-activated protein kinase and show that the phosphorylation of AKIP alters its subcellular localization patterns and RNA-binding specificity.
-
(2002)
Nature
, vol.418
, pp. 793-797
-
-
Li, J.1
Kinoshita, T.2
Pandey, S.3
Ng, C.K.4
Gygi, S.P.5
Shimazaki, K.6
Assmann, S.M.7
-
45
-
-
0037188548
-
An Arabidopsis mutation in translation elongation factor 2 causes superinduction of CBF/DREB1 transcription factor genes but blocks the induction of their downstream targets under low temperatures
-
LOS1 encodes a translation elongation factor2-like protein. A mutation in this gene abolishes cold-induced gene expression, probably by specifically blocking protein synthesis in the cold.
-
Guo Y., Xiong L., Ishitani M., Zhu J.K. An Arabidopsis mutation in translation elongation factor 2 causes superinduction of CBF/DREB1 transcription factor genes but blocks the induction of their downstream targets under low temperatures. Proc Natl Acad Sci USA. 99:2002;7786-7791 LOS1 encodes a translation elongation factor2-like protein. A mutation in this gene abolishes cold-induced gene expression, probably by specifically blocking protein synthesis in the cold.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 7786-7791
-
-
Guo, Y.1
Xiong, L.2
Ishitani, M.3
Zhu, J.K.4
-
46
-
-
0037143756
-
RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance
-
LOS4, an RNA helicase-like protein, is required for chilling tolerance. LOS4 acts as an upstream regulator of the CBF genes, which are cold induced and activate downstream cold-responsive genes.
-
Gong Z., Lee H., Xiong L., Jagendorf A., Stevenson B., Zhu J.K. RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance. Proc Natl Acad Sci USA. 99:2002;11507-11512 LOS4, an RNA helicase-like protein, is required for chilling tolerance. LOS4 acts as an upstream regulator of the CBF genes, which are cold induced and activate downstream cold-responsive genes.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11507-11512
-
-
Gong, Z.1
Lee, H.2
Xiong, L.3
Jagendorf, A.4
Stevenson, B.5
Zhu, J.K.6
-
47
-
-
0030873319
-
AtGRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana
-
Heintzen C., Nater M., Apel K., Staiger D. AtGRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana. Proc Natl Acad Sci USA. 94:1997;8515-8520.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 8515-8520
-
-
Heintzen, C.1
Nater, M.2
Apel, K.3
Staiger, D.4
-
48
-
-
0037266853
-
The circadian clock regulated RNA-binding protein AtGRP7 autoregulates its expression by influencing alternative splicing of its own pre-mRNA
-
Overexpression of AtGRP7 in Arabidopsis alters splice-site usage in the endogenous Atgrp7 pre-mRNA. This change results in the formation of an alternatively spliced transcript that has a premature stop codon rather than the Atgrp7 mRNA.
-
Staiger D., Zecca L., Kirk D.A., Apel K., Eckstein L. The circadian clock regulated RNA-binding protein AtGRP7 autoregulates its expression by influencing alternative splicing of its own pre-mRNA. Plant J. 33:2003;361-371 Overexpression of AtGRP7 in Arabidopsis alters splice-site usage in the endogenous Atgrp7 pre-mRNA. This change results in the formation of an alternatively spliced transcript that has a premature stop codon rather than the Atgrp7 mRNA.
-
(2003)
Plant J
, vol.33
, pp. 361-371
-
-
Staiger, D.1
Zecca, L.2
Kirk, D.A.3
Apel, K.4
Eckstein, L.5
-
49
-
-
0033561378
-
AtSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes
-
Lopato S., Kalyna M., Dorner S., Kobayashi R., Krainer A.R., Barta A. atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes. Genes Dev. 13:1999;987-1001.
-
(1999)
Genes Dev
, vol.13
, pp. 987-1001
-
-
Lopato, S.1
Kalyna, M.2
Dorner, S.3
Kobayashi, R.4
Krainer, A.R.5
Barta, A.6
-
50
-
-
0027171483
-
Differential organ-specific expression of three poly(A)-binding-protein genes from Arabidopsis thaliana
-
Belostotsky D.A., Meagher R.B. Differential organ-specific expression of three poly(A)-binding-protein genes from Arabidopsis thaliana. Proc Natl Acad Sci USA. 90:1993;6686-6690.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6686-6690
-
-
Belostotsky, D.A.1
Meagher, R.B.2
-
51
-
-
0034033177
-
Conserved expression of Arabidopsis thaliana poly (A) binding protein 2 (PAB2) in distinct vegetative and reproductive tissues
-
Palanivelu R., Belostotsky D.A., Meagher R.B. Conserved expression of Arabidopsis thaliana poly (A) binding protein 2 (PAB2) in distinct vegetative and reproductive tissues. Plant J. 22:2000;199-210.
-
(2000)
Plant J
, vol.22
, pp. 199-210
-
-
Palanivelu, R.1
Belostotsky, D.A.2
Meagher, R.B.3
-
52
-
-
0032192078
-
The plant U1 small nuclear ribonucleoprotein particle 70K protein interacts with two novel serine/arginine-rich proteins
-
Golovkin M., Reddy A.S. The plant U1 small nuclear ribonucleoprotein particle 70K protein interacts with two novel serine/arginine-rich proteins. Plant Cell. 10:1998;1637-1648.
-
(1998)
Plant Cell
, vol.10
, pp. 1637-1648
-
-
Golovkin, M.1
Reddy, A.S.2
-
53
-
-
0033579436
-
An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein
-
Golovkin M., Reddy A.S. An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein. J Biol Chem. 274:1999;36428-36438.
-
(1999)
J Biol Chem
, vol.274
, pp. 36428-36438
-
-
Golovkin, M.1
Reddy, A.S.2
-
54
-
-
0036464532
-
Arabidopsis thaliana exosome subunit AtRrp4p is a hydrolytic 3′→5′ exonuclease containing S1 and KH RNA-binding domains
-
Chekanova J.A., Dutko J.A., Mian I.S., Belostotsky D.A. Arabidopsis thaliana exosome subunit AtRrp4p is a hydrolytic 3′→5′ exonuclease containing S1 and KH RNA-binding domains. Nucleic Acids Res. 30:2002;695-700.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 695-700
-
-
Chekanova, J.A.1
Dutko, J.A.2
Mian, I.S.3
Belostotsky, D.A.4
-
55
-
-
0034599523
-
UBP1, a novel hnRNP-like protein that functions at multiple steps of higher plant nuclear pre-mRNA maturation
-
Lambermon M.H., Simpson G.G., Wieczorek Kirk D.A., Hemmings-Mieszczak M., Klahre U., Filipowicz W. UBP1, a novel hnRNP-like protein that functions at multiple steps of higher plant nuclear pre-mRNA maturation. EMBO J. 19:2000;1638-1649.
-
(2000)
EMBO J
, vol.19
, pp. 1638-1649
-
-
Lambermon, M.H.1
Simpson, G.G.2
Wieczorek Kirk, D.A.3
Hemmings-Mieszczak, M.4
Klahre, U.5
Filipowicz, W.6
-
56
-
-
0036264995
-
UBA1 and UBA2, two proteins that interact with UBP1, a multifunctional effector of pre-mRNA maturation in plants
-
Lambermon M.H., Fu Y., Kirk D.A., Dupasquier M., Filipowicz W., Lorkovic Z.J. UBA1 and UBA2, two proteins that interact with UBP1, a multifunctional effector of pre-mRNA maturation in plants. Mol Cell Biol. 22:2002;4346-4357.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 4346-4357
-
-
Lambermon, M.H.1
Fu, Y.2
Kirk, D.A.3
Dupasquier, M.4
Filipowicz, W.5
Lorkovic, Z.J.6
-
57
-
-
0033740021
-
RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells
-
Lorkovic Z.J., Wieczorek Kirk D.A., Klahre U., Hemmings-Mieszczak M., Filipowicz W. RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells. RNA. 6:2000;1610-1624.
-
(2000)
RNA
, vol.6
, pp. 1610-1624
-
-
Lorkovic, Z.J.1
Wieczorek Kirk, D.A.2
Klahre, U.3
Hemmings-Mieszczak, M.4
Filipowicz, W.5
-
58
-
-
0037782493
-
MicroRNAs: At the root of plant development?
-
Bartel B., Bartel D.P. MicroRNAs: at the root of plant development? Plant Physiol. 132:2003;709-717.
-
(2003)
Plant Physiol
, vol.132
, pp. 709-717
-
-
Bartel, B.1
Bartel, D.P.2
-
59
-
-
0038299558
-
Role of microRNAs in plant and animal development
-
Carrington J.C., Ambros V. Role of microRNAs in plant and animal development. Science. 301:2003;336-338.
-
(2003)
Science
, vol.301
, pp. 336-338
-
-
Carrington, J.C.1
Ambros, V.2
-
60
-
-
0023103568
-
Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing
-
Hurt D.J., Wang S.S., Lin Y.H., Hopper A.K. Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing. Mol Cell Biol. 7:1987;1208-1216.
-
(1987)
Mol Cell Biol
, vol.7
, pp. 1208-1216
-
-
Hurt, D.J.1
Wang, S.S.2
Lin, Y.H.3
Hopper, A.K.4
-
61
-
-
0026808979
-
GCR3 encodes an acidic protein that is required for expression of glycolytic genes in Saccharomyces cerevisiae
-
Uemura H., Jigami Y. GCR3 encodes an acidic protein that is required for expression of glycolytic genes in Saccharomyces cerevisiae. J Bacteriol. 174:1992;5526-5532.
-
(1992)
J Bacteriol
, vol.174
, pp. 5526-5532
-
-
Uemura, H.1
Jigami, Y.2
|