Conserved expression of Arabidopsis thaliana poly (A) binding protein 2 (PAB2) in distinct vegetative and reproductive tissues

Plant Journal

Volumn 22, Issue 3, 2000, Pages 199-210

  Palanivelu, Ravishankar ^a,c   Belostotsky, Dmitry A ^b   Meagher, Richard B ^a  

^a University of Georgia ^*  (United States)

^b STATE UNIVERSITY OF NEW YORK   (United States)

^c UNIVERSITY OF CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EUKARYOTIC CELL; GENE FUSION; GENETIC REGULATION; MESSENGER RNA; POLLINATION; POLY A BINDING PROTEIN 2; PROTEIN EXPRESSION; REPORTER GENE; RNA TRANSLATION; TOBACCO; TRANSCRIPTION REGULATION; TRANSGENIC PLANT;

AMINO ACID SEQUENCE; ARABIDOPSIS; BASE SEQUENCE; BLOTTING, NORTHERN; BLOTTING, WESTERN; DNA PRIMERS; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; POLY(A)-BINDING PROTEINS; RECOMBINANT FUSION PROTEINS; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; EUKARYOTA; NICOTIANA TABACUM;

EID: 0034033177     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2000.00720.x     Document Type: Article

References (50)

1. An, Y.-Q., Huang, S., McDowell, J.M., McKinney, E.C. and Meagher, R.B. (1996) Conserved expression of the Arabidopsis ACT1 and ACT3 actin subclass in organ primordia and mature pollen. Plant Cell, 8, 15-30.
2. Baker, E.J. (1993) Control of Poly (A) length. In Control of Messenger RNA Stability. New York: Academic Press, pp. 367-415.
3. Baker, E.J. (1997) mRNA Polyadenylation: Functional implications. In mRNA Metabolism and Post-Transcriptional Gene Regualtion. New York: Wiley-Liss, pp. 85-105.
4. Belostotsky, D. and Meagher, R.B. (1993) Differential organ-specific expression of three poly (A) binding protein genes from Arabidopsis. Proc. Natl Acad. Sci. USA, 90, 6686-6690.
5. Belostotsky, D.A. and Meagher, R.B. (1996) A pollen-, ovule-, and early embryo-specific poly (A) binding protein from Arabidopsis complements essential functions in yeast. Plant Cell. 8, 1261-1275.
6. Berger, L.C., Bag, J. and Sells, B.H. (1992) Translation of poly (A) -binding protein mRNA is regulated by growth conditions. Biochem. Cell Biol. 70, 770-778.
7. Bowman, J. (1994) Arabidopsis: an Atlas of Morphology and Development. New York: Springer-Verlag.
8. Brown, C.E. and Sachs, A.B. (1998) Poly (A) tail length control in saccharomyces cerevisiae occurs by message-specific deadenylation [In Process Citation]. Mol Cell Biol. 18, 6548-6559.
9. Burd, C.G., Matunis, E.L. and Dreyfuss, G. (1991) The multiple RNA-binding domains of the mRNA poly (A) -binding protein have different RNA-binding activities. Mol. Cell Biol. 11, 3419-3424.
10. Caponigro, G. and Parker, R. (1995) Multiple functions for the poly (A) -binding protein in mRNA decapping and deadenylation in yeast. Genes and Dev. 9, 2421-2432.
11. Caponigro, G. and Parker, R. (1996) Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae. Microbiol. Rev. 60, 233-249.
12. Cleveland, D.W. (1988) Autoregulated instability of tubulin mRNAs: a novel eukaryotic regulatory mechanism. TIBS, 13, 339-343.
13. Coller, J.M., Gray, N.K. and Wickens, M.P. (1998) mRNA stabilization by poly (A) binding protein is independent of poly (A) and requires translation. Genes Dev. 12, 3226-3235.
14. Cronquist, A. (1981) An Integrated System of Classification of Flowering Plants. New York: Columbia University Press.
15. Deardorff, J.A. and Sachs, A.B. (1997) Differential effects of aromatic and charged residue substitutions in the RNA binding domains of the yeast poly (A) -binding protein. J. Mol Biol. 269, 67-81.
16. Devereaux, J., Haeberli, P. and Smithies, O. (1984) A comprehensive set of sequence analysis programs for the VAX. Nucl. Acids Res. 12, 387-395.
17. Feinberg, A.P. and Vogelstein, B. (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13 and Addendum.
18. Gallie, D.R. (1998) A tale of two termini: a functional interaction between the termini of an mRNA is a prerequisite for efficient translation initiation. Gene, 216, 1-11.
19. Gera, J.F. and Baker, E.J. (1998) Deadenylation-dependent and -independent decay pathways for alpha1-tubulin mRNA in Chlamydomonas reinhardtii. Mol. Cell Biol. 18, 1498-1505.
20. Goldberg, R.B., Beals, T.P. and Sander, P.M. (1993) Anther development: Basic principles and practical applications. Plant Cell, 5, 1217-1229.
21. Gorlach, M., Burd, C.G. and Dreyfuss, G. (1994) The mRNA poly (A) biding protien: Localization, abundance, and RNA-binding specificity. Exp. Cell. Res. 211, 400-407.
22. Higgs, D.C. and Colbert, J.T. (1994) Oat phytochrome A mRNA degradation appears to occur via two distinct pathways. Plant Cell. 6, 1007-1019.
23. Hilson, P., Carroll, K.L. and Masson. P.H. (1993) Molecular characterization of PAB2, a member of the multigene family coding for poly (A) binding proteins in Arabidopsis thaliana. Plant Physiol. 103, 525-533.
24. Hornstein, E., Git, A., Braunstein, I., Avni, D. and Meyuhas, O. (1999) The expression of poly (A) binding protein gene is translationally regulated in a growth dependent fashiion through a 5′-terminal oligopyrimidine tract motif. J. Biol. Chem. 274, 1708-1714.
25. Horsch, R.B., Fry, J., Hoffmann, N., Neidermeyer, S., Rogers, S.G. and Fraley, R.T. (1988) Leaf disc transformation. Plant Molecular Biology Manual (Hingman, M.A., Gelvin, S.B. and Schilperoot, R.A., eds). A5, Kluwer: 1-9.
26. Huang, S., An, Y.-Q., McDowell, J.M., McKinney, E.C. and Meagher, R.B. (1997) The Arabidopsis ACT11 actin gene is strongly expressed in tissues of the emerging inflorescence, pollen and developing ovules. Plant Mol. Biol. 33, 125-139.
27. Kandasamy, M.K., Paolillo, D.J., Faraday, C.D., Nasrallah, J.B. and Nasrallah, M.E. (1989) The S-locus specific glycoproteins of Brassica accumulate in the cell wall of developing stigma papillae. Dev. Biol. 134, 462-472.
28. Kenan, D.J., Query, C.C. and Keene, J.D. (1991) RNA recognition: towards identifying determinants of specificity. TIBS, 16, 214-220.
29. Kuhn, U. and Pieler, T. (1996) Xenopus poly (A) binding protein: functional domains in RNA binding and protein-protein interaction. J. Mol. Biol. 256, 20-30.
30. Le, H., Chang, S.C., Tanguay, R.L. and Gallie, D.R. (1997) The wheat poly (A) -binding protein functionally complements pab1 in yeast. Eur. J. Biochem. 243, 350-357.
31. McCormick, S. (1993) Male gametophyte development. Plant Cell. 5, 1265-1275.
32. McLean, B.G., Eubanks, S. and Meagher, R.B. (1990) Tissue specific expression of divergent actins in soybean root. Plant Cell. 2, 335-344.
33. Meagher, R.B. (1995) The impact of historical contingency on gene phylogeny: Plant actin diversity. In Evolutionary Biology, 28 (Hecht, M.K., MacIntyre, R.J. and Clegg, M.T., eds). New York: Plenum Press, pp. 195-215.
34. Minvielle-Sebastia, L., Preker, P.J., Wiederkehr, T., Strahm, Y. and Keller, W. (1997) The major yeast poly (A) -binding protein is associated with cleavage factor IA and functions in premessenger RNA 3′-end formation. Proc. Natl Acad. Sci. USA, 94, 7897-7902.
35. Mitsialis, S.A. and Kafatos, F.C. (1985) Regulatory elements controlling chorion gene epxression are conserved baetween flies and moths. Nature, 317, 453-456.
36. Murray, M.G. and Thompson, W.F. (1980) Rapid isolation of high molecular weight plant DNA. Nucl. Acids Res. 8, 4321-4325.
37. Palanivelu, R., Belostotsky, D.A. and Meagher, R.B. (2000) Arabidopsis thaliana poly (A) binding protein 2 (PAB2), functions in yeast translational and mRNA decay processes. Plant J. 22, 187-198.
38. Reed, K.C. and Mann, D.A. (1985) Rapid transfer of DNA from agarose gels to nylon membrane. Nucl. Acids Res. 13, 7207-7221.
39. Sachs, A.B., Davis, R.W. and Kornberg, R.D. (1987) A single domain of yeast poly (A) -binding protein is necessary and sufficient for RNA binding and cell viability. Mot. Cell. Biol. 7, 3268-3276.
40. Sachs, A.B., Sarnow, P. and Hentze, M.W. (1997) Starting at the beginning, middle, and end: translation initiation in eukaryotes. Cell, 89, 831-838.
41. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual. Cold Spring Harbor: Cold Spring Harbor Laboratory Press.
42. + RNA in a cell-free system from embryo axes of dry pea seeds. Biochim. Biophys. Acta, 908, 54-59.
43. Tanzer, M.M. and Meagher, R.B. (1994) Faithful degradation of soybean rbcS mRNA in vitro. Mol. Cell. Biol. 14, 2640-2650.
44. Tarun, S. and Parker, R. (1997) Mechanisms of mRNA turnover in eukaryotic cells. In mRNA Metabolism and Post Transcriptional Gene Regulation (Harford, J.B. and Morris, D.R., eds). New York: Wiley-Liss.
45. Tarun, S.Z. and Sachs, A.B. (1995) A common function for mRNA 5′ and 3′ ends in translational initiation in yeast. Genes Dev. 9, 2997-3007.
46. Taylor, T.N. and Taylor, E.L. (1993) The Biology and Evolution of Fossil Plants. Englewood Cliffs: Prentice Hall.
47. Wang, H., Wu, H.M. and Cheung, A.Y. (1996) Pollination induces mRNA poly (A) tail-shortening and cell deterioration in flower transmitting tissue. Plant J. 9, 715-727.
48. Wu, J. and Bag, J. (1998) Negative control of the poly (A) -binding protein mRNA translation is mediated by the adenine-rich region of its 5′-untranslated region. J. Biol. Chem. 273, 34535-34542.
49. Yohn, C.B., Cohen, A., Danon, A. and Mayfield, S.P. (1998) A poly (A) binding protein functions in the chloroplast as a message-specific translation factor. Proc. Natl Acad. Sci. USA, 95, 2238-2243.
50. Zhang, L., Zhou, W., Velculescu, V.E., Kern, S.E., Hruban, R.H., Hamilton, S.R., Vogelstein, B. and Kinzler, K.W. (1997) Gene expression profiles in normal and cancer cells. Science, 276, 1268-1272.