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14
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85030903367
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All new compounds 2 and 3 gave spectroscopic data (IR, NMR), elemental analyses (CHN) and/or MS in agreement with the assigned structures
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All new compounds 2 and 3 gave spectroscopic data (IR, NMR), elemental analyses (CHN) and/or MS in agreement with the assigned structures.
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16
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0027484152
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and references cited herein.
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Perez, M.2
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18
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0037030606
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Bell I.A., Gallicchio S.N., Abrams M., Beese L.S., Beshore D.C., Bhimnathwala H., Bogusky M.J., Buser C.A., Culberson J.C., Davide J., Ellis-Hutchings M., Fernandes C., Gibbs J.B., Graham S.L., Hamilton K.A., Hartman G.D., Heimbrook D.C., Homnick C.F., Huber H.E., Huff J.R., Kassahun K., Koblan K.S., Kohl N.E., Lobell R.B., Lynch J.J., Robinson R., Rodrigues A.D., Taylor J.S., Walsh E.S., Williams T.M., Zartman C.B. J. Med. Chem. 45:2002;2388.
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Bell, I.A.1
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Abrams, M.3
Beese, L.S.4
Beshore, D.C.5
Bhimnathwala, H.6
Bogusky, M.J.7
Buser, C.A.8
Culberson, J.C.9
Davide, J.10
Ellis-Hutchings, M.11
Fernandes, C.12
Gibbs, J.B.13
Graham, S.L.14
Hamilton, K.A.15
Hartman, G.D.16
Heimbrook, D.C.17
Homnick, C.F.18
Huber, H.E.19
Huff, J.R.20
Kassahun, K.21
Koblan, K.S.22
Kohl, N.E.23
Lobell, R.B.24
Lynch, J.J.25
Robinson, R.26
Rodrigues, A.D.27
Taylor, J.S.28
Walsh, E.S.29
Williams, T.M.30
Zartman, C.B.31
more..
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19
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85030892094
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note
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All structures were modelled in SYBYL® 6.9. using standard bond lengths and angles. The whole protein, including the zinc and the farnesyl di-phosphate (yellow), was kept fixed in aggregate, except the side chains of some of the hydrophobic amino-acid residues of the beta chain at the active site in close contact with the ligands which were allowed to change their conformations depending on the ligands docked, that is TRP102, TRP106, TYR154, TRP303, TYR361 and TYR365. All the hydrogen atoms were added on the crystal structure pdb1LD8 of the enzyme and their geometries were optimised using the Tripos force field, using Kollman charges on all atom of the residues of the protein and Gasteiger-Hückel charges on the other non-protein molecules. All the water, U49 and acetate molecules were removed before docking.
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