Extracting stacking interaction parameters for RNA from the data set of native structures

Journal of Molecular Biology

Volumn 347, Issue 1, 2005, Pages 53-69

  Dima, Ruxandra I ^a   Hyeon, Changbong ^a   Thirumalai, D ^a,b  

^a UNIVERSITY OF MARYLAND   (United States)

^b Bldg 142   (United States)

Author keywords

Interaction parameters for base pair stacking; RNA secondary structure; Statistical potentials; Threading; Z scores

Indexed keywords

OLIGONUCLEOTIDE;

ARTICLE; BASE PAIRING; CALORIMETRY; LINEAR SYSTEM; MATHEMATICAL ANALYSIS; NUCLEOTIDE SEQUENCE; PREDICTION; PRIORITY JOURNAL; PROTEIN DATA BANK; PROTEIN STRUCTURE; RNA ANALYSIS; RNA STRUCTURE; STATISTICAL PARAMETERS; STRUCTURE ANALYSIS; THERMODYNAMICS;

EID: 14144252846     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2004.12.012     Document Type: Article

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