Membrane surface dynamics of DNA-threaded nanopores revealed by simultaneous single-molecule optical and ensemble electrical recording

Langmuir

Volumn 20, Issue 3, 2004, Pages 898-905

  Chandler, Emily L ^a,b   Smith, Alyssa L ^a   Burden, Lisa M ^a,b   Kasianowicz, John J ^c   Burden, Daniel L ^a,b  

^a WHEATON COLLEGE   (United States)

^b Biomolecular Nanotechnologies Msrmt   (United States)

^c NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; ELECTRIC FIELD EFFECTS; ELECTRIC PROPERTIES; INTERFACES (MATERIALS); LIPIDS; MICROSCOPIC EXAMINATION; MOLECULAR DYNAMICS; NANOSTRUCTURED MATERIALS; OPTICAL PROPERTIES; POROSITY;

CONFOCAL MICROSCOPY; ENSEMBLE ELECTRICAL RECORDING; FLUORESCENCE CORRELATION ANALYSIS; MEMBRANE BASED SENSOR; MEMBRANE SURFACE DYNAMICS;

BIOLOGICAL MEMBRANES;

1,2 DIPHYTANOYLPHOSPHATIDYLCHOLINE; 1,2-DIPHYTANOYLPHOSPHATIDYLCHOLINE; DNA; FLUORESCENT DYE; HEMOLYSIN; ION CHANNEL; NANOMATERIAL; PHOSPHATIDYLCHOLINE; PHOSPHATIDYLGLYCEROL; STREPTAVIDIN;

ARTICLE; ARTIFICIAL MEMBRANE; BIOTINYLATION; CELL MEMBRANE POTENTIAL; CHEMISTRY; COMPARATIVE STUDY; ELECTROCHEMISTRY; LIPID BILAYER; POROSITY; SURFACE PROPERTY;

BIOTINYLATION; DNA; ELECTROCHEMISTRY; FLUORESCENT DYES; HEMOLYSIN PROTEINS; ION CHANNELS; LIPID BILAYERS; MEMBRANE POTENTIALS; MEMBRANES, ARTIFICIAL; NANOSTRUCTURES; PHOSPHATIDYLCHOLINES; PHOSPHATIDYLGLYCEROLS; POROSITY; STREPTAVIDIN; SURFACE PROPERTIES;

EID: 1242265462     PISSN: 07437463     EISSN: None     Source Type: Journal    
DOI: 10.1021/la035728i     Document Type: Article

References (55)

1. Trojanowicz, M. Fresenius' J. Anal. Chem. 2001, 371, 246-60.
2. Reiken, S. R.; Van Wie, B. J.; Sutisna, H. Biosens. Bioelectron. 1996, 11, 91-102.
3. Andreou, V. G.; Nikolelis, D. P.; Tarus, B. Anal. Chim. Acta 1997, 350, 121-9.
4. Andreou, V. G.; Nikolelis, D. P. Anal. Chem. 1998, 70, 2366-71.
5. Siontoru, C. G.; Andreou, V. G.; Nikolelis, D. P.; Krull, U. J. Electroanalysis 2000, 12, 747-51.
6. Sato, H.; Wakabayashi, M.; Ito, T.; Sugawara, M.; Umezawa, Y. Anal. Sci. 1997, 13, 437-46.
7. Salamon, Z.; Tien, H. T. Electroanalysis 1991, 3, 707-10.
8. Tien, H. T.; Ottova, A. L. In Membrane biophysics: As viewed from experimental bilayer lipid membranes (planar lipid bilayers and spherical liposomes); Elsevier: Amsterdam, 2000.
9. Nikolelis, D. P.; Siontorou, C. G.; Andreou, V. G. Lab. Rob. Autom. 1997, 9, 285-96.
10. Thompson, M.; Krull, U. J.; Venis, M. A. Biochem. Biophys. Res. Commun. 1983, 110, 300-4.
11. Minami, H.; Sugawara, M.; Odashima, K.; Umezawa, Y.; Uto, M.; Michaelis, E. K.; Kuwana, T. Anal. Chem. 1991, 63, 2787-95.
12. Adachi, Y.; Sugawara, M.; Taniguchi, K.; Umezawa, Y. Anal. Chim. Acta 1993, 281, 577.
13. Sugawara, M.; Hirano, A.; Rehak, M.; Nakanishi, J. Biosens. Bioelectron. 1997, 12, 425.
14. Nikolelis, D. P.; Siontoru, C. G.; Krull, U. J.; Katrivanos, P. L. Anal. Chem. 1996, 68, 1735-41.
15. Cornell, B. A.; Braach-Maksvytis, V. L.; King, L. G.; Osman, P. D. J.; Raguse, B.; Wieczorek, L.; Pace, R. J. Nature 1997, 387, 580-3.
16. Kasianowicz, J.; Burden, D.; Han, L.; Cheley, S.; Bayley, H. Biophys. J. 1999, 76, 837-45.
17. Kasianowicz, J.; Bezrukov, S. Biophys. J. 1995, 69, 94-105.
18. Gu, L. Q.; Braha, O.; Conlan, S.; Cheley, S.; Bayley, H. Nature 1999, 398, 686-90.
19. Kasianowicz, J.; Henrickson, S.; Weetall, H. Robertson, B. Anal. Chem. 2001, 73, 2268-72.
20. Movileanu, L.; Howorka, S.; Braha, O.; Bayley, H. Nat. Biotechnol. 2000, 18, 1091-5.
21. Meller, A.; Nivon, L.; Brandin, E.; Golovchenko, J.; Branton, D. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 1079-84.
22. Howorka, S.; Movileanu, L.; Braha, O.; Bayley, H. Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 12996-3001.
23. Kasianowicz, J.; Brandin, E.; Branton, D.; Deamer, D. W. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 13770-3.
24. Akeson, M.; Branton, D.; Kasianowicz, J. J.; Brandin, E.; Deamer, D. W. Biophys. J. 1997, 77, 3227-33.
25. Henrickson, S.; Misakian, M.; Robertson, B.; Kasianowicz, J. J. Phys. Rev. Lett. 2000, 85, 3057-3060.
26. Vercoutere, W.; Winter-Hilt, S.; Olsen, H.; Deaner, D.; Haussler, D.; Akeson, M. Nat. Biotechnol. 2001, 19, 248-52.
27. Song, L.; Hobaugh, M. R.; Shustak, C.; Cheley, S.; Bayley, H.; Gouaux, J. E. Science 1996, 74, 1859-66.
28. Veatch, W. R.; Mathies, R.; Eisenberg, M.; Stryer, L. J. Mol. Biol. 1975, 99, 75-92.
29. Schmidt, Th.; Schütz, G. J.; Baumgartner, W.; Gruber, H. J.; Schindler, H. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 2926-9.
30. Schmidt, Th.; Schütz, G. J.; Baumgartner, W.; Gruber, H. J.; Schindler, H. J. Phys. Chem. 1995, 99, 17662-8.
31. Ide, T.; Yanagida, T. Biochem. Biophys. Res. Commun. 1999, 265, 595-9.
32. Harms, G.; Orr, G.; Montal, M.; Thrall, B.; Colson, S.; Lu, H. Biophys. J. 2003, 85, 1826-1838.
33. Ide, T.; Takeuchi, Y.; Yanagida, T. Single Molecules 2002, 3, 33-42.
34. Borisenko, V.; Lougheed, T.; Hesse, J.; Füreder-Kitzmüller, E.; Fertig, N.; Behrends, J. C.; Woolley, G. A., Schütz, G. J. Biophys. J. 2003, 84, 612-22.
35. Sonnleitner, A.; Mannuzzu, L.; Terakawa, S.; Isacoff, E. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 12759-64.
36. Harms, G.; Cognet, L.; Lommerse, P.; Blab, G.; Kahr, H.; Gamsjäger, R.; Spaink, H.; Soldatov, N.; Romanin, C.; Schmidt, T. Biophys. J. 2001, 81, 2639-46.
37. Mueller, P.; Rudin, D. O.; Tien, H. T.; Wescott, W. C. Nature 1962, 194, 979-80.
38. Burden, D.; Kasianowicz, J. J. Phys. Chem. B 2000, 104, 6103-7.
39. Sheffield, P.; Garrard, S.; Derewenda, Z. Protein Expression Purif. 1999, 15, 34-9.
40. Walker, B.; Krishnasastry, M.; Zorn, L.; Kasianowicz, J.; Bayley, H. J. Biol. Chem. 1992, 267, 10902-9.
41. Niles, W. D.; Levis, R. A.; Cohen, F. S. Biophys. J. 1988, 53, 327-35.
42. White, S. H.; Thompson, T. E. Biochim. Biophys. Acta 1973, 323, 7-22.
43. Rigler, R.; Mets, U.; Widengren, J.; Kask, P. Eur. Biophys. J. 1993, 22, 169-75.
44. Fahey, P.; Koppel, D.; Barak, L.; Wolf, D.; Elson, E.; Webb, W. Science 1977, 195, 305-6.
45. Thompson, N. L. Topics in Fluorescence Spectroscopy; Plenum Press: New York, 1991; Chapter 6, pp. 337-378.
46. Magde, D.; Elson, E. L.; Webb, W. W. Phys. Rev. Lett. 1972, 29, 705-8.
47. Elson, E. L.; Magde, D. Biopolymers 1974, 13, 1-27.
48. Magde, D.; Elson, E. L.; Webb, W. W. Biopolymers 1974, 13, 29-61.
49. Sonnleitner, A.; Schütz, G.; Schmidt, Th. Biophys. J. 1999, 77, 2638-42.
50. Jung, L. S.; Nelson, K. E.; Stayton, P. S.; Campbell, C. T. Langmuir 2000, 16, 9421-32.
51. Jung, L. S.; Campbel, C. T.; Chinowsky, T. M.; Mar, M. N.; Yee, S. S. Langmuir 1998, 14, 5636-48.
52. Reiter, R.; Motschmann, H.; Knoll, W. Langmuir 1993, 9, 2430-5.
53. Sheth, S.; Leckband, D. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 8399-404.
54. Rüdiger, M.; Haupts, U.; Moore, K.; Pope, A. J. Biomol. Screening 2001, 6, 29-37.
55. Mirzabekov, T.; Silberstein, A.; Kagan, B. Methods Enzymol. 1999, 294, 661-74.