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Volumn 76, Issue 2, 2005, Pages 291-301

Contrasting effects of natural selection on human and chimpanzee CC chemokine receptor 5

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CCR5;

EID: 12344288002     PISSN: 00029297     EISSN: None     Source Type: Journal    
DOI: 10.1086/427927     Document Type: Article
Times cited : (36)

References (48)
  • 3
    • 0037307413 scopus 로고    scopus 로고
    • Signatures of natural selection in the human genome
    • Bamshad M, Wooding S (2003) Signatures of natural selection in the human genome. Nat Rev Genet 4:99-111
    • (2003) Nat Rev Genet , vol.4 , pp. 99-111
    • Bamshad, M.1    Wooding, S.2
  • 5
    • 0033635892 scopus 로고    scopus 로고
    • The level of HIV-1 infection of macrophages is determined by interaction of viral and host cell genotypes
    • Cunningham AL, Li S, Juarez J, Lynch G, Alali M, Naif H (2000) The level of HIV-1 infection of macrophages is determined by interaction of viral and host cell genotypes. J Leukoc Biol 68:311-317
    • (2000) J Leukoc Biol , vol.68 , pp. 311-317
    • Cunningham, A.L.1    Li, S.2    Juarez, J.3    Lynch, G.4    Alali, M.5    Naif, H.6
  • 7
    • 0033150184 scopus 로고    scopus 로고
    • Evolution of a HOXB6 intergenic region within the great apes and humans
    • Deinard A, Kidd K (1999) Evolution of a HOXB6 intergenic region within the great apes and humans. J Hum Evol 36:687-703
    • (1999) J Hum Evol , vol.36 , pp. 687-703
    • Deinard, A.1    Kidd, K.2
  • 8
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using PHRED. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P (1998) Base-calling of automated sequencer traces using PHRED. I. Accuracy assessment. Genome Res 8:175-185
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 9
    • 0036889242 scopus 로고    scopus 로고
    • Human demographic history: Refining the recent African origin model
    • Excoffier L (2002) Human demographic history: refining the recent African origin model. Curr Opin Genet Dev 12:675-682
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 675-682
    • Excoffier, L.1
  • 10
    • 1942437481 scopus 로고    scopus 로고
    • Evidence for a complex demographic history of chimpanzees
    • Fischer A, Wiebe V, Paabo S, Przeworski M (2004) Evidence for a complex demographic history of chimpanzees. Mol Biol Evol 21:799-808
    • (2004) Mol Biol Evol , vol.21 , pp. 799-808
    • Fischer, A.1    Wiebe, V.2    Paabo, S.3    Przeworski, M.4
  • 11
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu Y-X (1997) Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915-925
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.-X.1
  • 12
    • 0035967953 scopus 로고    scopus 로고
    • Gene flow in wild chimpanzee populations: What genetic data tell us about chimpanzee movement over space and time
    • Gagneux P, Gonder MK, Goldberg TL, Morin PA (2001) Gene flow in wild chimpanzee populations: what genetic data tell us about chimpanzee movement over space and time. Philos Trans R Soc Lond B Biol Sci 356:889-897
    • (2001) Philos Trans R Soc Lond B Biol Sci , vol.356 , pp. 889-897
    • Gagneux, P.1    Gonder, M.K.2    Goldberg, T.L.3    Morin, P.A.4
  • 14
    • 0345166037 scopus 로고    scopus 로고
    • Evaluating plague and smallpox as historical selective pressures for the CCR5-Δ-32 HIV-resistance allele
    • Galvani AP, Slatkin M (2003) Evaluating plague and smallpox as historical selective pressures for the CCR5-Δ-32 HIV-resistance allele. Proc Nat Acad Sci USA 100:15276-15279
    • (2003) Proc Nat Acad Sci USA , vol.100 , pp. 15276-15279
    • Galvani, A.P.1    Slatkin, M.2
  • 16
    • 0030877471 scopus 로고    scopus 로고
    • The geographic apportionment of mitochondrial genetic diversity in East African chimpanzees, Pan troglodytes schweinfurthii
    • Goldberg TL, Ruvolo M (1997) The geographic apportionment of mitochondrial genetic diversity in East African chimpanzees, Pan troglodytes schweinfurthii. Mol Biol Evol 14:976-984
    • (1997) Mol Biol Evol , vol.14 , pp. 976-984
    • Goldberg, T.L.1    Ruvolo, M.2
  • 18
    • 0034575123 scopus 로고    scopus 로고
    • Genetic perspectives on human origins and differentiation
    • Harpending HC, Rogers A (2000) Genetic perspectives on human origins and differentiation. Annu Rev Genomics Hum Genet 1:361-385
    • (2000) Annu Rev Genomics Hum Genet , vol.1 , pp. 361-385
    • Harpending, H.C.1    Rogers, A.2
  • 20
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • Futuyma D, Antonovics J (eds). Oxford University Press, Oxford, United Kingdom
    • Hudson RR (1990) Gene genealogies and the coalescent process. In: Futuyma D, Antonovics J (eds) Oxford series in evolutionary biology. Vol 7. Oxford University Press, Oxford, United Kingdom, pp 1-44
    • (1990) Oxford Series in Evolutionary Biology , vol.7 , pp. 1-44
    • Hudson, R.R.1
  • 21
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • - (2002) Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18:337-338
    • (2002) Bioinformatics , vol.18 , pp. 337-338
  • 22
    • 0033527718 scopus 로고    scopus 로고
    • Extensive nuclear DNA sequence diversity among chimpanzees
    • Kaessmann H, Wiebe V, Pääbo S (1999) Extensive nuclear DNA sequence diversity among chimpanzees. Science 286:1159-1162
    • (1999) Science , vol.286 , pp. 1159-1162
    • Kaessmann, H.1    Wiebe, V.2    Pääbo, S.3
  • 23
    • 0035132473 scopus 로고    scopus 로고
    • Great ape DNA sequences reveal a reduced diversity and an expansion in humans
    • Kaessmann H, Wiebe V, Weiss G, Pääbo S (2001) Great ape DNA sequences reveal a reduced diversity and an expansion in humans. Nat Genet 27:155-156
    • (2001) Nat Genet , vol.27 , pp. 155-156
    • Kaessmann, H.1    Wiebe, V.2    Weiss, G.3    Pääbo, S.4
  • 30
    • 0034705597 scopus 로고    scopus 로고
    • Evolution of human and non-primate CC chemokine receptor 5 gene and mRNA: Potential roles for haplotype and mRNA diversity, differential haplotype-specific transcriptional activity, and altered transcription factor binding to polymorphic nucleotides in the pathogenesis of HIV-1 and simian immunodeficiency virus
    • Mummidi S, Bamshad M, Ahuja SS, Gonzalez E, Feuillet PM, Begum K, Galvis MC, Kostecki V, Valente AJ, Murthy KK, Haro L, Dolan MJ, Allan JS, Ahuja SK (2000) Evolution of human and non-primate CC chemokine receptor 5 gene and mRNA: potential roles for haplotype and mRNA diversity, differential haplotype-specific transcriptional activity, and altered transcription factor binding to polymorphic nucleotides in the pathogenesis of HIV-1 and simian immunodeficiency virus. J Biol Chem 275:18946-18961
    • (2000) J Biol Chem , vol.275 , pp. 18946-18961
    • Mummidi, S.1    Bamshad, M.2    Ahuja, S.S.3    Gonzalez, E.4    Feuillet, P.M.5    Begum, K.6    Galvis, M.C.7    Kostecki, V.8    Valente, A.J.9    Murthy, K.K.10    Haro, L.11    Dolan, M.J.12    Allan, J.S.13    Ahuja, S.K.14
  • 31
    • 0030872838 scopus 로고    scopus 로고
    • PolyPhred: Automating the detection and genotyping of single-nucleotide substitutions using fluorescence-based resequencing
    • Nickerson DA, Tobe VO, Taylor SL (1997) PolyPhred: automating the detection and genotyping of single-nucleotide substitutions using fluorescence-based resequencing. Nucleic Acids Res 25:2745-2751
    • (1997) Nucleic Acids Res , vol.25 , pp. 2745-2751
    • Nickerson, D.A.1    Tobe, V.O.2    Taylor, S.L.3
  • 32
    • 0036273751 scopus 로고    scopus 로고
    • In vitro susceptibility to infection with SIVcpz and HIV-1 is lower in chimpanzee than in human peripheral blood mononuclear cells
    • Ondoa P, Davis D, Kestens L, Vereekcken C, Garcia Ribas S, Fransen K, Heeney J, van der Groen G (2002) In vitro susceptibility to infection with SIVcpz and HIV-1 is lower in chimpanzee than in human peripheral blood mononuclear cells. J Med Virol 67:301-311
    • (2002) J Med Virol , vol.67 , pp. 301-311
    • Ondoa, P.1    Davis, D.2    Kestens, L.3    Vereekcken, C.4    Garcia Ribas, S.5    Fransen, K.6    Heeney, J.7    Van Der Groen, G.8
  • 34
    • 0000621581 scopus 로고
    • Genetic evidence for a Pleistocene population explosion
    • Rogers AR (1995) Genetic evidence for a Pleistocene population explosion. Evolution 49:608-615
    • (1995) Evolution , vol.49 , pp. 608-615
    • Rogers, A.R.1
  • 35
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers AR, Harpending HC (1992) Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol 9:552-569
    • (1992) Mol Biol Evol , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.C.2
  • 37
    • 0035978759 scopus 로고    scopus 로고
    • Natural selection and resistance to HIV
    • Schliekelman P, Gardner C, Slatkin M (2001) Natural selection and resistance to HIV. Nature 411:545-546
    • (2001) Nature , vol.411 , pp. 545-546
    • Schliekelman, P.1    Gardner, C.2    Slatkin, M.3
  • 39
    • 0242691208 scopus 로고    scopus 로고
    • A comparison of Bayesian methods for haplotype reconstruction from population genotype data
    • Stephens M, Donnelly P (2003) A comparison of Bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 73:1162-1169
    • (2003) Am J Hum Genet , vol.73 , pp. 1162-1169
    • Stephens, M.1    Donnelly, P.2
  • 41
    • 0021066244 scopus 로고
    • Evolutionary relationships of DNA sequences in finite populations
    • Tajima F (1983) Evolutionary relationships of DNA sequences in finite populations. Genetics 105:437-460
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 42
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • - (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595
    • (1989) Genetics , vol.123 , pp. 585-595
  • 43
    • 0242524432 scopus 로고    scopus 로고
    • Patterns of human genetic diversity: Implications for human evolutionary history and disease
    • Tishkoff SA, Verrelli BC (2003) Patterns of human genetic diversity: implications for human evolutionary history and disease. Annu Rev Genomics Hum Genet 4:293-340
    • (2003) Annu Rev Genomics Hum Genet , vol.4 , pp. 293-340
    • Tishkoff, S.A.1    Verrelli, B.C.2
  • 44
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson GA (1975) On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7:256-276
    • (1975) Theor Popul Biol , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 45
    • 1842539589 scopus 로고    scopus 로고
    • Natural selection and molecular evolution in PTC, a bitter-taste receptor gene
    • Wooding S, Kim U, Bamshad M, Larsen J, Jorde L, Drayna D (2004) Natural selection and molecular evolution in PTC, a bitter-taste receptor gene. Am J Hum Genet 74:637-646
    • (2004) Am J Hum Genet , vol.74 , pp. 637-646
    • Wooding, S.1    Kim, U.2    Bamshad, M.3    Larsen, J.4    Jorde, L.5    Drayna, D.6
  • 46
    • 0033796908 scopus 로고    scopus 로고
    • A Pleistocene population X-plosion?
    • Wooding S, Rogers A (2000) A Pleistocene population X-plosion? Hum Biol 72:693-695
    • (2000) Hum Biol , vol.72 , pp. 693-695
    • Wooding, S.1    Rogers, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.