The box VII motif of Escherichia coli DnaA protein is required for DnaA oligomerization at the E. coli replication origin

Journal of Biological Chemistry

Volumn 279, Issue 49, 2004, Pages 51156-51162

  Felczak, Magdalena M ^a   Kaguni, Jon M ^a  

^a Michigan State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BIOCHEMISTRY; CHROMOSOMES; DNA; OLIGOMERS; PROTEINS;

HELICASE; OLIGOMERIZATION; PLASMIDS;

ESCHERICHIA COLI;

ADENOSINE TRIPHOSPHATE; ALANINE; ARGININE; BACTERIAL DNA; BACTERIAL PROTEIN; DEOXYRIBONUCLEOPROTEIN; DNA A; DNA B; DNA HOMOLOG; HELICASE; MUTANT PROTEIN; PLASMID DNA; PROTEIN BOX VII; UNCLASSIFIED DRUG;

AQUIFEX AEOLICUS; ARTICLE; BINDING AFFINITY; BIOCHEMISTRY; DNA REPLICATION; DNA STRUCTURE; ESCHERICHIA COLI; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; OLIGOMERIZATION; PLASMID; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN MOTIF; SITE DIRECTED MUTAGENESIS;

ADENOSINE TRIPHOSPHATASES; ADENOSINE TRIPHOSPHATE; ALANINE; ALLELES; AMINO ACID MOTIFS; ARGININE; BACTERIAL PROTEINS; DNA HELICASES; DNA-BINDING PROTEINS; DNAB HELICASES; DOSE-RESPONSE RELATIONSHIP, DRUG; ESCHERICHIA COLI; HYDROLYSIS; MUTAGENESIS, SITE-DIRECTED; MUTATION; PLASMIDS; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; REPLICATION ORIGIN; STRUCTURE-ACTIVITY RELATIONSHIP; TIME FACTORS;

AQUIFEX AEOLICUS; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 10944257577     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M409695200     Document Type: Article

References (50)

1. Messer, W. (2002) FEMS Microbiol. Rev. 26, 355-374
2. Kaguni, J. M. (1997) Mol. Cells 7, 145-157
3. Kornberg, A., and Baker, T. A. (1992) DNA Replication, 2nd Ed., W.H. Freeman and Company, New York
4. Fuller, R. S., Funnell, B. E., and Kornberg, A. (1984) Cell 38, 889-900
5. Matsui, M., Oka, A., Takanami, M., Yasuda, S., and Hirota, Y. (1985) J. Mol. Biol. 184, 529-533
6. Bramhill, D., and Kornberg, A. (1988) Cell 52, 743-755
7. Marszalek, J., and Kaguni, J. M. (1994) J. Biol. Chem. 269, 4883-4890
8. Fang, L., Davey, M. J., and O'Donnell, M. (1999) Mol. Cell 4, 541-553
9. Carr, K. M., and Kaguni, J. M. (2001) J. Biol. Chem. 276, 44919-44925
10. LeBowitz, J. H., and McMacken, R. (1986) J. Biol. Chem. 261, 4738-4748
11. Baker, T. A., Funnell, B. E., and Kornberg, A. (1987) J. Biol. Chem. 262, 6877-6885
12. Tougu, K., and Marians, K. J. (1996) J. Biol. Chem. 271, 21398-21405
13. Glover, B. P., and McHenry, C. S. (2001) Cell 105, 925-934
14. Erzberger, J. P., Pirruccello, M. M., and Berger, J. M. (2002) EMBO J. 21, 4763-4773
15. Bell, S. P. (2002) Genes Dev. 16, 659-672
16. Sutton, M. D., Carr, K. M., Vicente, M., and Kaguni, J. M. (1998) J. Biol. Chem. 273, 34255-34262
17. Simmons, L. A., Felczak, M., and Kaguni, J. M. (2003) Mol. Microbiol. 49, 849-858
18. Koonin, E. V. (1993) Nucleic Acids Res. 21, 2541-2547
19. Neuwald, A. F., Aravind, L., Spouge, J. L., and Koonin, E. V. (1999) Genome Res. 9, 27-43
20. Roth, A., and Messer, W. (1995) EMBO J. 14, 2106-2111
21. Sutton, M. D., and Kaguni, J. M. (1997) J. Mol. Biol. 274, 546-561
22. Blaesing, F., Weigel, C., Welzeck, M., and Messer, W. (2000) Mol. Microbiol. 38, 557-569
23. Fujikawa, N., Kurumizaka, H., Nureki, O., Terada, T., Shirouzu, M., Katayama, T., and Yokoyama, S. (2003) Nucleic Acids Res. 31, 2077-2086
24. Davey, M. J., Fang, L., McInerney, P., Georgescu, R. E., and ODonnell, M. (2002) EMBO J. 21, 3148-3159
25. Doran, K. S., Helinski, D. R., and Konieczny, I. (1999) J. Biol. Chem. 274, 17918-17923
26. Carr, K. M., and Kaguni, J. M. (1996) Mol. Microbiol. 20, 1307-1318
27. Sutton, M. D., and Kaguni, J. M. (1997) J. Biol. Chem. 272, 23017-23024
28. Hwang, D. S., and Kaguni, J. M. (1988) J. Biol. Chem. 263, 10633-10640
29. Kaguni, J. M., and Kornberg, A. (1984) Cell 38, 183-190
30. Masai, H., Nomura, N., and Arai, K. (1990) J. Biol. Chem. 265, 15134-15144
31. Simmons, L. A., and Kaguni, J. M., (2003) Mol. Microbiol. 47, 755-765
32. Durland, R. H., Toukdarian, A., Fang, F., and Helinski, D. R. (1990) J. Bacteriol. 172, 3859-3867
33. Braun, R. E., O'Day, K., and Wright, A. (1985) Cell 40, 159-169
34. Sekimizu, K., Bramhill, D., and Kornberg, A. (1987) Cell 50, 259-265
35. Margulies, C., and Kaguni, J. M. (1996) J. Biol. Chem. 271, 17035-17040
36. Funnell, B. E., Baker, T. A., and Kornberg, A. (1987) J. Biol. Chem. 262, 10327-10334
37. Wahle, E., Lasken, R. S., and Kornberg, A. (1989) J. Biol. Chem. 264, 2469-2475
38. Wahle, E., Lasken, R. S., and Kornberg, A. (1989) J. Biol. Chem. 264, 2463-2468
39. Baker, T. A., Sekimizu, K., Funnell, B. E., and Kornberg, A. (1986) Cell 45, 53-64
40. Carr, K. M., and Kaguni, J. M. (2002) J. Biol. Chem. 277, 39815-39822
41. Weigel, C., Schmidt, A., Seitz, H., Tungler, D., Welzeck, M., and Messer, W. (1999) Mol. Microbiol. 34, 53-66
42. Woelker, B., and Messer, W. (1993) Nucleic Acids Res. 21, 5025-5033
43. Margulies, C. A. (1997) in The Influence of JHF and FIS on the Ordered Binding of DnaA Protein to oriC, the E. coli Chromosomal Origin. Ph.D. thesis, Michigan State University, East Lansing
44. Vossen, K. M., and Fried, M. G. (1997) Anal. Biochem. 245, 85-92
45. Fried, M. G., and Liu, G. (1994) Nucleic Acids Res. 22, 5054-5059
46. Jakimowicz, D., Majka, J., Messer, W., Speck, C., Fernandez, M., Martin, M. C., Sanchez, J., Schauwecker, F., Keller, U., Schrempf, H., and Zakrzewska-Czerwinska, J. (1998) Microbiology (Read.) 144, 1281-1290
47. Seitz, H., Weigel, C., and Messer, W. (2000) Mol. Microbiol. 37, 1270-1279
48. Garner, J., and Crooke, E. (1996) EMBO J. 15, 3477-3485
49. Fuller, R. S., Kaguni, J. M., and Kornberg, A. (1981) Proc. Natl. Acad. Sci. U. S. A. 78, 7370-7374
50. Sutton, M. D., and Kaguni, J. M. (1997) J. Mol. Biol. 271, 693-703