-
1
-
-
84985396150
-
Arthropod phylogeny - A modern synthesis
-
Manton S.M. Arthropod phylogeny - a modern synthesis. J. Zool. 171:1973;111-130.
-
(1973)
J. Zool.
, vol.171
, pp. 111-130
-
-
Manton, S.M.1
-
3
-
-
0344976284
-
Phylogenetic reconstruction versus classification: The case for clear demarcation
-
Martin R. Phylogenetic reconstruction versus classification: the case for clear demarcation. Biologist. 28:1981;127-132.
-
(1981)
Biologist
, vol.28
, pp. 127-132
-
-
Martin, R.1
-
5
-
-
0037297734
-
A plea for DNA taxonomy
-
Tautz D., et al. A plea for DNA taxonomy. Trends Ecol. Evol. 18:2003;70-74.
-
(2003)
Trends Ecol. Evol.
, vol.18
, pp. 70-74
-
-
Tautz, D.1
-
6
-
-
0037296612
-
The intellectual content of taxonomy: A comment on DNA taxonomy
-
Lipscomb D., et al. The intellectual content of taxonomy: a comment on DNA taxonomy. Trends Ecol. Evol. 18:2003;65-66.
-
(2003)
Trends Ecol. Evol.
, vol.18
, pp. 65-66
-
-
Lipscomb, D.1
-
7
-
-
0041874747
-
Isolation of Psoroptes scab mite microsatellite markers (Acari: Psoroptidae)
-
Evans L.M., et al. Isolation of Psoroptes scab mite microsatellite markers (Acari: Psoroptidae). Mol. Ecol. Notes. 3:2003;420-424.
-
(2003)
Mol. Ecol. Notes
, vol.3
, pp. 420-424
-
-
Evans, L.M.1
-
8
-
-
0037417874
-
Secondary loss of chloroplasts in trypanosomes
-
Martin W., Borst P. Secondary loss of chloroplasts in trypanosomes. Proc. Natl. Acad. Sci. U. S. A. 100:2003;765-767.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 765-767
-
-
Martin, W.1
Borst, P.2
-
9
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson J.D., et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
-
10
-
-
0034043777
-
The performance of several multiple-sequence alignment programs in relation to secondary-structure features for an rRNA sequence
-
Hickson R.E., et al. The performance of several multiple-sequence alignment programs in relation to secondary-structure features for an rRNA sequence. Mol. Biol. Evol. 17:2000;530-539.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 530-539
-
-
Hickson, R.E.1
-
11
-
-
0036094818
-
An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks
-
Gaunt M.W., Miles M.A. An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks. Mol. Biol. Evol. 19:2002;748-761.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 748-761
-
-
Gaunt, M.W.1
Miles, M.A.2
-
12
-
-
0034222981
-
Trypanosoma cruzi - The vector-parasite paradox
-
Schofield C.J. Trypanosoma cruzi - the vector-parasite paradox. Mem. Inst. Oswaldo Cruz. 95:2000;535-544.
-
(2000)
Mem. Inst. Oswaldo Cruz
, vol.95
, pp. 535-544
-
-
Schofield, C.J.1
-
13
-
-
0036019709
-
Phylogeny and biogeography of Triatominae (Hemiptera: Reduviidae): Molecular evidence of a New World origin of the Asiatic clade
-
Hypsa V., et al. Phylogeny and biogeography of Triatominae (Hemiptera: Reduviidae): molecular evidence of a New World origin of the Asiatic clade. Mol. Phylogenet. Evol. 23:2002;447-457.
-
(2002)
Mol. Phylogenet. Evol.
, vol.23
, pp. 447-457
-
-
Hypsa, V.1
-
14
-
-
0034176535
-
Evidence for mitochondrial introgression between Anopheles bwambae and Anopheles gambiae
-
Thelwell N.J., et al. Evidence for mitochondrial introgression between Anopheles bwambae and Anopheles gambiae. Insect Mol. Biol. 9:2000;203-207.
-
(2000)
Insect Mol. Biol.
, vol.9
, pp. 203-207
-
-
Thelwell, N.J.1
-
15
-
-
0036010999
-
Paraphyly in Hawaiian hybrid blowfly populations and the evolutionary history of anthropophilic species
-
Stevens J.R., et al. Paraphyly in Hawaiian hybrid blowfly populations and the evolutionary history of anthropophilic species. Insect Mol. Biol. 11:2002;141-148.
-
(2002)
Insect Mol. Biol.
, vol.11
, pp. 141-148
-
-
Stevens, J.R.1
-
16
-
-
0036361537
-
Phylogenetic relationships of North American garter snakes (Thamnophis) based on four mitochondrial genes: How much DNA sequence is enough?
-
Queiroz A., et al. Phylogenetic relationships of North American garter snakes (Thamnophis) based on four mitochondrial genes: how much DNA sequence is enough? Mol. Phylog. Evol. 22:2002;315-329.
-
(2002)
Mol. Phylog. Evol.
, vol.22
, pp. 315-329
-
-
Queiroz, A.1
-
17
-
-
0034467318
-
Phylogeny and molecular taxonomy of the Rhodniini derived from mitochondrial and nuclear DNA Sequences
-
Monteiro F.A., et al. Phylogeny and molecular taxonomy of the Rhodniini derived from mitochondrial and nuclear DNA Sequences. Am. J. Trop. Med. Hyg. 62:2001;460-465.
-
(2001)
Am. J. Trop. Med. Hyg.
, vol.62
, pp. 460-465
-
-
Monteiro, F.A.1
-
18
-
-
0011761992
-
Phylogenetic estimation
-
M.J. Bishop, & C.J. Rawlings. IRL Press
-
Goldman N. Phylogenetic estimation. Bishop M.J., Rawlings C.J. DNA and Protein Sequence Analysis. 1997;279-312 IRL Press.
-
(1997)
DNA and Protein Sequence Analysis
, pp. 279-312
-
-
Goldman, N.1
-
21
-
-
0037226827
-
Factors affecting the errors in the estimation of evolutionary distances between sequences
-
Hoyle D.C., Higgs P.G. Factors affecting the errors in the estimation of evolutionary distances between sequences. Mol. Biol. Evol. 20:2003;1-9.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1-9
-
-
Hoyle, D.C.1
Higgs, P.G.2
-
22
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
Felsenstein J. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:1978;401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
23
-
-
11944268967
-
Performance of phylogenetic methods in simulation
-
Huelsenbeck J.P. Performance of phylogenetic methods in simulation. Syst. Biol. 44:1995;17-48.
-
(1995)
Syst. Biol.
, vol.44
, pp. 17-48
-
-
Huelsenbeck, J.P.1
-
24
-
-
0034983477
-
Effects of nucleotide composition bias on the success of the parsimony criterion in phylogenetic inference
-
Conant G.C., Lewis P.O. Effects of nucleotide composition bias on the success of the parsimony criterion in phylogenetic inference. Mol. Biol. Evol. 18:2001;1024-1033.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1024-1033
-
-
Conant, G.C.1
Lewis, P.O.2
-
25
-
-
84959795073
-
Phylogenetic analysis under Dollo's Law
-
Farris J.S. Phylogenetic analysis under Dollo's Law. Syst. Zool. 26:1977;77-88.
-
(1977)
Syst. Zool.
, vol.26
, pp. 77-88
-
-
Farris, J.S.1
-
26
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:1981;368-376.
-
(1981)
J. Mol. Evol.
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
28
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
Posada D., Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics. 14:1998;817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
30
-
-
0023074036
-
An evaluation of the molecular clock hypothesis using mammalian DNA sequences
-
Li W., et al. An evaluation of the molecular clock hypothesis using mammalian DNA sequences. J. Mol. Evol. 25:1987;330-342.
-
(1987)
J. Mol. Evol.
, vol.25
, pp. 330-342
-
-
Li, W.1
-
31
-
-
0027308854
-
Body size, metabolic rate, generation time and the molecular clock
-
Martin A.P., Palumbi S.R. Body size, metabolic rate, generation time and the molecular clock. Proc. Natl. Acad. Sci. U. S. A. 90:1993;4087-4091.
-
(1993)
Proc. Natl. Acad. Sci. U. S. A.
, vol.90
, pp. 4087-4091
-
-
Martin, A.P.1
Palumbi, S.R.2
-
32
-
-
0031436890
-
Phylogeny estimation and hypothesis testing using maximum likelihood
-
Huelsenbeck J.P., Crandall K.A. Phylogeny estimation and hypothesis testing using maximum likelihood. Annu. Rev. Ecol. Syst. 28:1997;437-466.
-
(1997)
Annu. Rev. Ecol. Syst.
, vol.28
, pp. 437-466
-
-
Huelsenbeck, J.P.1
Crandall, K.A.2
-
33
-
-
0033975365
-
Origins and evolution of AIDS viruses: Estimating the time-scale
-
Sharp P.M., et al. Origins and evolution of AIDS viruses: estimating the time-scale. Biochem. Soc. Trans. 28:2000;275-282.
-
(2000)
Biochem. Soc. Trans.
, vol.28
, pp. 275-282
-
-
Sharp, P.M.1
-
34
-
-
0020328686
-
Mitochondrial DNA sequences of primates: Tempo and mode of evolution
-
Brown W.M., et al. Mitochondrial DNA sequences of primates: tempo and mode of evolution. J. Mol. Evol. 18:1982;225-239.
-
(1982)
J. Mol. Evol.
, vol.18
, pp. 225-239
-
-
Brown, W.M.1
-
35
-
-
0035207510
-
Maximum-likelihood divergence date estimates based on rRNA gene sequences suggest two scenarios of Trypanosoma cruzi intraspecific evolution
-
Kawashita S.Y., et al. Maximum-likelihood divergence date estimates based on rRNA gene sequences suggest two scenarios of Trypanosoma cruzi intraspecific evolution. Mol. Biol. Evol. 18:2001;2250-2259.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 2250-2259
-
-
Kawashita, S.Y.1
-
36
-
-
0037297395
-
Evidence for genetic exchange and hybridization in Trypanosoma cruzi based on nucleotide sequences and molecular karyotype
-
Brisse S., et al. Evidence for genetic exchange and hybridization in Trypanosoma cruzi based on nucleotide sequences and molecular karyotype. Infect. Genet. Evol. 2:2003;173-183.
-
(2003)
Infect. Genet. Evol.
, vol.2
, pp. 173-183
-
-
Brisse, S.1
-
37
-
-
5644237959
-
The molecular phylogeny of trypanosomes: Evidence for an early divergence of the Salivaria
-
Haag J., et al. The molecular phylogeny of trypanosomes: evidence for an early divergence of the Salivaria. Mol. Biochem. Parasitol. 91:1998;37-49.
-
(1998)
Mol. Biochem. Parasitol.
, vol.91
, pp. 37-49
-
-
Haag, J.1
-
38
-
-
0027138234
-
Evolution of nuclear ribosomal RNAs in kinetoplastid protozoa: Perspectives on the age and origins of parasitism
-
Fernandes A.P., et al. Evolution of nuclear ribosomal RNAs in kinetoplastid protozoa: perspectives on the age and origins of parasitism. Proc. Natl. Acad. Sci. U. S. A. 90:1993;11608-11612.
-
(1993)
Proc. Natl. Acad. Sci. U. S. A.
, vol.90
, pp. 11608-11612
-
-
Fernandes, A.P.1
-
39
-
-
0032720058
-
The evolution of two Trypanosoma cruzi subgroups inferred from rRNA genes can be correlated with the interchange of American mammalian faunas in the Cenozoic and has implications to pathogenicity and host specificity
-
Briones R.S.M., et al. The evolution of two Trypanosoma cruzi subgroups inferred from rRNA genes can be correlated with the interchange of American mammalian faunas in the Cenozoic and has implications to pathogenicity and host specificity. Mol. Biochem. Parasitol. 104:1999;219-232.
-
(1999)
Mol. Biochem. Parasitol.
, vol.104
, pp. 219-232
-
-
Briones, R.S.M.1
-
40
-
-
0035182476
-
The molecular evolution of Trypanosomatidae
-
Stevens J.R., et al. The molecular evolution of Trypanosomatidae. Adv. Parasitol. 48:2001;1-56.
-
(2001)
Adv. Parasitol.
, vol.48
, pp. 1-56
-
-
Stevens, J.R.1
-
41
-
-
0033256228
-
Recommendations from a satellite meeting
-
Recommendations from a satellite meeting. Mem. Inst. Oswaldo Cruz. 94:1999;429-432.
-
(1999)
Mem. Inst. Oswaldo Cruz
, vol.94
, pp. 429-432
-
-
-
42
-
-
0035912819
-
Nucleotide sequences provide evidence of genetic exchange among distantly related lineages of Trypanosoma cruzi
-
Machado C.A., Ayala F.J. Nucleotide sequences provide evidence of genetic exchange among distantly related lineages of Trypanosoma cruzi. Proc. Natl. Acad. Sci. U. S. A. 98:2001;7396-7401.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 7396-7401
-
-
MacHado, C.A.1
Ayala, F.J.2
-
43
-
-
0342382938
-
The importance of gene rearrangement in evolution: Evidence from studies on rates of chromosomal, protein and anatomical evolution
-
Wilson A.C., et al. The importance of gene rearrangement in evolution: evidence from studies on rates of chromosomal, protein and anatomical evolution. Proc. Natl. Acad. Sci. U. S. A. 71:1974;3028-3030.
-
(1974)
Proc. Natl. Acad. Sci. U. S. A.
, vol.71
, pp. 3028-3030
-
-
Wilson, A.C.1
-
44
-
-
0034218490
-
Genomic rearrangements in Trypanosomatids: An alternative to the 'one gene' evolutionary hypotheses?
-
Dujardin J.C., et al. Genomic rearrangements in Trypanosomatids: an alternative to the 'one gene' evolutionary hypotheses? Mem. Inst. Oswaldo Cruz. 95:2000;527-534.
-
(2000)
Mem. Inst. Oswaldo Cruz
, vol.95
, pp. 527-534
-
-
Dujardin, J.C.1
-
45
-
-
0029921392
-
Heterochromatin and gene regulation in Drosophila
-
Elgin S.C. Heterochromatin and gene regulation in Drosophila. Curr. Opin. Genet. Dev. 6:1996;193-202.
-
(1996)
Curr. Opin. Genet. Dev.
, vol.6
, pp. 193-202
-
-
Elgin, S.C.1
-
47
-
-
0024164575
-
Phylogenetic trees support the coevolution of parasites and their hosts
-
Hafner M.S., Nadler S.A. Phylogenetic trees support the coevolution of parasites and their hosts. Nature. 332:1988;258-259.
-
(1988)
Nature
, vol.332
, pp. 258-259
-
-
Hafner, M.S.1
Nadler, S.A.2
-
50
-
-
0035687612
-
Evolutionary rate differences in trypanosomes
-
Stevens J., Rambaut A. Evolutionary rate differences in trypanosomes. Infect. Genet. Evol. 1:2001;143-150.
-
(2001)
Infect. Genet. Evol.
, vol.1
, pp. 143-150
-
-
Stevens, J.1
Rambaut, A.2
-
51
-
-
8244223880
-
Analysis of ribosomal RNA genes suggests that trypanosomes are monophyletic
-
Lukes J., et al. Analysis of ribosomal RNA genes suggests that trypanosomes are monophyletic. J. Mol. Evol. 44:1997;521-527.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 521-527
-
-
Lukes, J.1
-
52
-
-
0000316142
-
The ancient and divergent origins of the human pathogenic trypanosomes, Trypanosoma brucei and T. cruzi
-
Stevens J.R., et al. The ancient and divergent origins of the human pathogenic trypanosomes, Trypanosoma brucei and T. cruzi. Parasitology. 118:1999;107-116.
-
(1999)
Parasitology
, vol.118
, pp. 107-116
-
-
Stevens, J.R.1
-
53
-
-
0030120423
-
The analysis of protein coding genes suggests monophyly of Trypanosoma
-
Alvarez F., et al. The analysis of protein coding genes suggests monophyly of Trypanosoma. Mol. Phylogenet. Evol. 5:1996;333-343.
-
(1996)
Mol. Phylogenet. Evol.
, vol.5
, pp. 333-343
-
-
Alvarez, F.1
-
54
-
-
0032517093
-
Molecular analysis of phosphoglycerate kinase in Trypanoplasma borreli and the evolution of this enzyme in Kinetoplastida
-
Adjé C.A., et al. Molecular analysis of phosphoglycerate kinase in Trypanoplasma borreli and the evolution of this enzyme in Kinetoplastida. Gene. 217:1998;91-99.
-
(1998)
Gene
, vol.217
, pp. 91-99
-
-
Adjé, C.A.1
-
55
-
-
0032429319
-
Comparison and evolutionary analysis of the glycosomal glyceraldehyde-3-phosphate dehydrogenase from different Kinetoplastida
-
Hannaert V., et al. Comparison and evolutionary analysis of the glycosomal glyceraldehyde-3-phosphate dehydrogenase from different Kinetoplastida. J. Mol. Evol. 47:1998;728-738.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 728-738
-
-
Hannaert, V.1
-
56
-
-
0001686784
-
Can Trypanosoma trees be trusted? - Reply
-
Noyes H.A., Rambaut A. Can Trypanosoma trees be trusted? - Reply. Parasitol. Today. 14:1998;335.
-
(1998)
Parasitol. Today
, vol.14
, pp. 335
-
-
Noyes, H.A.1
Rambaut, A.2
-
57
-
-
0031966291
-
Estimating divergence dates from molecular sequences
-
Rambaut A., Bromham L. Estimating divergence dates from molecular sequences. Mol. Biol. Evol. 15:1998;442-448.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 442-448
-
-
Rambaut, A.1
Bromham, L.2
-
58
-
-
0033933640
-
Estimation of primate speciation dates using local molecular clocks
-
Yoder A.D., Yang Z. Estimation of primate speciation dates using local molecular clocks. Mol. Biol. Evol. 17:2000;1081-1090.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1081-1090
-
-
Yoder, A.D.1
Yang, Z.2
-
59
-
-
0031659306
-
Temperature gradient gel electrophoresis (TGGE) analysis of riboprints from Trypanosoma cruzi
-
Stothard J.R., et al. Temperature gradient gel electrophoresis (TGGE) analysis of riboprints from Trypanosoma cruzi. Parasitology. 117:1998;249-253.
-
(1998)
Parasitology
, vol.117
, pp. 249-253
-
-
Stothard, J.R.1
-
60
-
-
0034220146
-
Analysis of genetic diversity of Trypanosoma cruzi: An application of riboprinting and gradient gel electrophoresis methods
-
Stothard J.R., et al. Analysis of genetic diversity of Trypanosoma cruzi: an application of riboprinting and gradient gel electrophoresis methods. Mem. Inst. Oswaldo Cruz. 95:2000;545-551.
-
(2000)
Mem. Inst. Oswaldo Cruz
, vol.95
, pp. 545-551
-
-
Stothard, J.R.1
|