Redesigning the monovalent cation specificity of an enzyme

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue SUPPL. 2, 2003, Pages 13785-13790

  Prasad, Swati ^a   Wright, Kelly J ^a   Roy, Dolly Banerjee ^a   Bush, Leslie A ^a   Cantwell, Angelene M ^a   Di Cera, Enrico ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; ARGININE; ASPARTIC ACID; GLUTAMINE; LYSINE; MONOVALENT CATION; POTASSIUM ION; PROLINE; PYRUVATE KINASE; SODIUM ION; THROMBIN;

ALLOSTERISM; AMINO ACID SUBSTITUTION; ANIMAL TISSUE; ARTICLE; BINDING SITE; CONTROLLED STUDY; DISSOCIATION CONSTANT; ENZYME ACTIVATION; ENZYME SPECIFICITY; HUMAN; NONHUMAN; PRIORITY JOURNAL; SITE DIRECTED MUTAGENESIS;

BINDING SITES; CATIONS, MONOVALENT; HUMANS; KINETICS; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; POTASSIUM; PROTEIN ENGINEERING; SODIUM; SUBSTRATE SPECIFICITY; THERMODYNAMICS; THROMBIN;

ANIMALIA; VERTEBRATA;

EID: 0344270925     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.2333109100     Document Type: Article

References (55)

1. Boyer, P. D., Lardy, H. A. & Phillips, P. H. (1942) J. Biol. Chem. 146, 673-681.
2. Evans, H. J. & Sorger, G. J. (1966) Annu. Rev. Plant Physiol. 17, 47-76.
3. Suelter, C. H. (1970) Science 168, 789-795.
4. Deprez, E., Di Primo, C., Hoa, G. H. & Douzou, P. (1994) FEBS Lett. 347, 207-210.
5. Laine-Cessac, P. & Allain, P. (1996) Enzyme Protein 49, 291-304.
6. Yoshisumi, A., Wada, M., Takagi, H., Shimizu, S. & Nakamori, S. (2001) Biosci. Biotechnol. Biochem. 65, 830-836.
7. Xiang, B., Taylor, J. C. & Markham, G. D. (1996) J. Biol. Chem. 271, 1435-1440.
8. Radfar, R., Leaphart, A., Brewer, J. M., Minor, W., Odom, J. D., Dunlap, R. B., Lovell, C. R. & Lebioda, L. (2000) Biochemistry 39, 14481-14486.
9. Ahmad, A., Akhtar, M. S. & Bhakuni, V. (2001) Biochemistry 40, 1945-1955.
10. Andersson, C. E. & Mowbray, S. L. (2002). J. Mol. Biol. 315, 409-419.
11. Rockwell, N. C. & Fuller, R. S. (2002) J. Biol. Chem. 277, 17531-17537.
12. Basu, S., Rambo, R. P., Strauss-Soukup, J., Cate, J. H., Ferre-D'Amare, A. R., Strobel, S. A. & Doudna, J. A. (1998) Nat. Struct. Biol. 5, 927-930.
13. Miskin, R., Zamir, A. & Elson, D. (1970) J. Mol. Biol. 54, 355-378.
14. Zamir, A., Miskin, R. & Elson, D. (1971) J. Mol. Biol. 60, 347-364.
15. Toney, M. D., Hohenester, E., Cowan, S. W. & Jansonius, J. N. (1993) Science 261, 756-759.
16. Larsen, T. M., Laughlin, L. T., Holden, H. M., Rayment, I. & Reed, G. H. (1994) Biochemistry 33, 6301-6309.
17. Di Cera, E., Guinto, E. R., Vindigni, A., Dang, Q. D., Ayala, Y. M., Wuyi, M. & Tulinsky, A. (1995) J. Biol. Chem. 270, 22089-22092.
18. Wilbanks, S. M. & McKay, D. B. (1995) J. Biol. Chem. 270, 2251-2257.
19. Villeret, V., Huang, S., Fromm, H. J. & Lipscomb, W. N. (1995) Proc. Natl. Acad. Sci. USA 92, 8916-8920.
20. Takusagawa, F., Kamitori, S. & Markham, G. D. (1996) Biochemistry, 35, 2586-2596.
21. Rhee, S., Parris, K. D., Ahmed, S. A., Miles, E. W. & Davies, D. R. (1996) Biochemistry 35, 4211-4221.
22. Zhang, E. & Tulinsky, A. (1997) Biophys. Chem. 63, 185-200.
23. Labesse, G., Ferrari, D., Chen, Z. W., Rossi, G. L., Kuusk, V., McIntire, W. S. & Mathews, F. S. (1998) J. Biol. Chem. 273, 25703-25712.
24. Sousa, M. C. & McKay, D. B. (2001) Acta Crystallogr. D 57, 1950-1954.
25. Schmidt, A. E., Padmanabhan, K., Underwood, M. C., Bode, W., Mather, T. & Bajaj, S. P. (2002) J. Biol. Chem. 277, 28987-28995.
26. Larsen, T. M. & Reed, G. H. (2001) in Handbook of Metalloproteins, eds. Bertini, I., Sigel, A. & Sigel, H. (Dekker, New York), pp. 9-37.
27. Eisenman, G. & Dani, J. A. (1987) Annu. Rev. Biophys. Biophys. Chem. 16, 205-226.
28. Collins, K. D. (1995) Proc. Natl. Acad. Sci. USA 92, 5553-5557.
29. Guinto, E. R. & Di Cera, E. (1996) Biochemistry 35, 8800-8804.
30. Wells, C. M. & Di Cera, E. (1992) Biochemistry 31, 11721-11730.
31. Di Cera, E. (2003) Chest 124, 11-17.
32. Guinto, E. R., Caccia, S., Rose, T., Fütterer, K., Waksman, G. & Di Cera, E. (1999) Proc. Natl. Acad. Sci. USA 96, 1852-1857.
33. Pineda, A. O., Savvides, S., Waksman, G. & Di Cera, E. (2002) J. Biol. Chem. 277, 40177-40180.
34. Quaife, C. J., Findley, S. D., Erickson, J. C., Froelick, G. J., Kelly, E. J., Zambrowicz, B. P. & Palmiter, R. D. (1994) Biochemistry 33, 7250-7259.
35. Henriksen, R. A., Dunham, C. K., Miller, L. D., Casey, J. T., Menke, J. B., Knupp, C. L. & Usala, S. J. (1998) Blood 91, 2026-2031.
36. Ladbury, J. E., Wright, J. G., Sturtevant, J. M. & Sigler, P. B. (1994) J. Mol. Biol. 238, 669-681.
37. Ramirez-Silva, L., Oria, J., Gomez-Puyou, A. & Tuena de Gomez-Puyou, I. (1997) Eur. J. Biochem. 250, 583-589.
38. Doyle, D. A., Morais-Cabral, J., Pfuetzner, R. A., Kuo, A., Gulbis, J. M., Cohen, S. L., Chait, B. T. & MacKinnon, R. (1998) Science 280, 69-77.
39. Morais-Cabral, J. H., Zhou, Y. & MacKinnon, R. (2001) Nature 414, 23-24.
40. Roux, B. & MacKinnon, R. (1999) Science 285, 100-102.
41. Galzi, J. L., Devillers-Thiery, A., Hussy, N., Bertrand, S., Changeux, J. P. & Bertrand, D. (1992) Nature 359, 500-505.
42. Gunthorpe, M. J. & Lummis, S. C. (2001) J. Biol. Chem. 27, 10977-10983.
43. Keramidas, A., Moorhouse, A. J., French, C. R., Schofield, P. R. & Barry, P. H. (2000) Biophys. J. 79, 247-259.
44. Keramidas, A., Moorhouse, A. J., Pierce, K. D., Schofield, P. R. & Barry, P. H. (2002) J. Gen. Physiol. 119, 393-410.
45. Yool, A. J. & Schwarz, T. L. (1991) Nature 349, 657-658.
46. Uozumi, N., Gassmann, W., Cao, Y. & Schroeder, J. L. (1995) J. Biol. Chem. 270, 24276-24281.
47. Tsushima, R. G. & Backx, P. H. (1997) J. Gen. Physiol. 109, 463-475.
48. Kellenberger, S., Gautschi, I. & Schild, L. (1999) Proc. Natl. Acad. Sci. USA 96, 4170-4175.
49. Yue, L., Navarro, B., Ren, D., Ramos, A. & Clapham, D. E. (2002) J. Gen. Physiol. 120, 845-853.
50. Bode, W., Turk, D. & Karshikov, A. (1992) Protein Sci. 1, 426-471.
51. Sundararaju, B., Chen, H., Shilcutt, S. & Phillips, R. S. (2000) Biochemistry 39, 8546-8555.
52. Phillips, R. S. & Doshi, K. J. (1998) Eur. J. Biochem. 255, 508-515.
53. Laughlin, L. T. & Reed, G. H. (1997) Arch. Biochem. Biophys. 348, 262-267.
54. Wilbanks, S. M. & McKay, D. B. (1998) Biochemistry 37, 7456-7462.
55. Banerjee-Roy, D., Rose, T. & Di Cera, E. (2001) Proteins 43, 315-318.