Crystallographic and spectroscopic studies of native, aminoquinol, and monovalent cation-bound forms of methylamine dehydrogenase from Methylobacterium extorquens AM1

Journal of Biological Chemistry

Volumn 273, Issue 40, 1998, Pages 25703-25712

  Labesse, Gilles ^a,e   Ferrari, Davide ^d   Chen, Zhi Wei ^a   Rossi, Gian Luigi ^d   Kuusk, Vladisav ^b   McIntire, William S ^b,c   Mathews, F Scott ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b SAN FRANCISCO VETERANS AFFAIRS MEDICAL CENTER   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d UNIVERSITY OF PARMA   (Italy)

^e INSERM   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINE DEHYDROGENASE; BACTERIAL ENZYME;

ABSORPTION SPECTROPHOTOMETRY; ARTICLE; CRYSTAL STRUCTURE; ENZYME ACTIVE SITE; ENZYME ANALYSIS; ENZYME STRUCTURE; METHYLOBACTERIUM; NONHUMAN; PARACOCCUS DENITRIFICANS; PRIORITY JOURNAL;

BACTERIAL PROTEINS; BINDING SITES; CESIUM; CRYSTALLOGRAPHY, X-RAY; INDOLEQUINONES; METHYLAMINES; MODELS, MOLECULAR; OXIDOREDUCTASES ACTING ON CH-NH GROUP DONORS; QUINONES; SPECTROPHOTOMETRY; TRYPTOPHAN;

BACTERIA (MICROORGANISMS); METHYLOBACTERIUM; METHYLOBACTERIUM EXTORQUENS; PARACOCCUS DENITRIFICANS;

EID: 0032475842     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.273.40.25703     Document Type: Article

References (43)

1. Anthony, C. (1982) The Biochemistry of Methylotrophs, Academic Press, New York
2. McIntire, W. S., Wemmer, D. E., Chistoserdov, A., and Lidstrom, M. E. (1991) Science 252, 817-824
3. Husain, M., and Davidson, V. L. (1987) J. Bacteriol. 169, 1712-1717
4. Chistoserdov, A. Y., Chistoserdova, L. V., McIntire, W. S., and Lidstrom, M. E. (1994) J. Bacteriol. 176, 4052-4065
5. Ubbink, M., van Heef, M. A., Kleinjan, D. J., Hoitink, C. W., Huitema, F., Beintema, J. J., Duine, J. A., and Canters, G. W. (1991) Eur. J. Biochem. 202, 1003-1012
6. Chistoserdov, A. Y., Boyd, J., Mathews, F. S., and Lidstrom, M. E. (1992) Biochem. Biophys. Res. Commun. 184, 1181-1189
7. Chen, L., Durley, R., Poliks, B. J., Hamada, K., Chen, Z., Mathews, F. S., Davidson, V. L., Satow, Y, Huizinga, E., Vellieux, F. M. D., and Hol, W. G. J. (1992) Biochemistry 31, 4959-4964
8. Chistoserdov, A. Y., McIntire, W. S., Mathews, F. S., and Lidstrom, M. E. (1994) J. Bacteriol. 176, 4073-4080
9. Kiriukhin, M. Y., Chistoserdov, A. Y., and Tsygankov, Y. D. (1990) Methods Enzymol. 188, 247-250
10. Vellieux, F. M. D., Huitman, F., Groendijk, H., Kalk, K. H., Frank, J., Jongejan, J. A., Duine, J. A., Petrators, K., Drenth, J., and Hol, W. G. J. (1989) EMBO J. 8, 2171-2178
11. Chen, L., Doi, M., Durley, R. C. E., Chistoserdov, A. Y., Lidstrom, M. E., Davidson, V. L., and Mathews, F. S. (1998) J. Mol. Biol. 276, 131-149
12. Ito, N., Phillips, S. E. V., Yadov, K. D. S., and Knowles, P. F. (1994) J. Mol. Biol. 238, 794-814
13. Wall, M. A., Coleman, D. E., Lee, E., Iniguez-Lluhi, J. A., Posner, B. A., Gilman, A. G., and Sprang, S. R. (1995) Cell 83, 1047-1058
14. McIntire, W. S. (1995) Methods Enzymol. 258, 149-164
15. Huizinga E. G., van Zanten B. A., Duine J. A., Jongejan J. A., Huitema F., Wilson, K. S., and Hol, W. G. (1992) Biochemistry 31, 9789-9795
16. Davidson, V. L. (1989) Biochem. J. 261, 107-111
17. Brooks, H. B., Jones, L. H., and Davidson, V. L. (1993) Biochemistry 32, 2725-2729
18. Bishop, G. R., Brooks, H. B., and Davidson, V. L. (1996) Biochemistry 35, 8948-8954
19. Kuusk, V., and McIntire, W. S. (1994) J. Biol. Chem. 269, 26136-26143
20. Gorren, A. C., and Duine, J. A. (1994) Biochemistry 33, 12202-12209
21. Zhu, Z., and Davidson, V. L. (1998) Biochem. J. 329, 175-182
22. Davidson, V. L., and Kumar, M. A. (1990) Biochim. Biophys. Acta 1016, 339-343
23. Gorren, A. C., Moenne-Loccoz, P., Backes, G., de Vries, S., Sanders-Loehr, J., and Duine, J. A. (1995) Biochemistry 34, 12926-12931
24. Gorren, A. C., de Vries, S., and Duine, J. A. (1995) Biochemistry 34, 9748-9754
25. Eady, R. R., and Large, P. J. (1971) Biochem. J. 123, 757-771
26. Boulton, C. A., and Large, P. J. (1979) Biochim. Biophys. Acta 570, 22-30
27. Rivetti, C., Mozzarelli, A., Rossi, G. L., Henry, E. R., and Eaton, W. A. (1993) Biochemistry 32, 2888-2906
28. Merli, A., Brodersen, D. E., Morini, B., Chen, Z., Durley, R. C. E., Mathews, F. S., Davidson, V. L., and Rossi, G. L. (1996) J. Biol. Chem. 271, 9177-9180
29. Howard, A. J., Nielsen, C., and Xuong, N. H. (1985) Methods Enzymol 114, 452-472
30. Otwinowski, Z. (1993) in Data Collection and Processing (Sawyer, L., Isaacs, N., and Bailey, S., eds) Science and Engineering Research Council, Daresbury Laboratory, Warrington, UK
31. Navaza, J. (1994) Acta Crystallogr. Sec. A 50, 157-163
32. Labesse, G., and Mornon, J.-P. (1998) Bioinformatics 14, 206-211
33. Brunger, A. T. (1992)X-PLOR, Version 3.1, Yale University Press, New Haven, CT
34. Jones, T. A., You, J. Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. Sect. A 47, 110-119
35. Labesse, G., Colloc'h, N., Pothier, J., and Mornon, J.-P. (1997) Comput. Appl. Biosci. 13, 291-295
36. Morris, A. L., MacArthur, M. W., Hutchinson, E. G., and Thornton, J. M. (1992) Proteins Struct. Funct. Genet. 12, 345-364
37. Bishop, G. R., and Davidson, V. L. (1997) Biochemistry 36, 13586-13592
38. Chen, L., Lim, L. W., Mathews, F. S., Davidson, V. L., and Husain, M. (1988) J. Mol. Biol. 203, 1137-1138
39. Chen, L., Mathews, F. S., Davidson, V. L., Tegoni, M., Rivetti, C., and Rossi, G. L. (1993) Protein Sci. 2, 147-154
40. Vellieux, F. M., Frank, J., Swarte, M. B., Groendijk, H., Duine, J. A., Drenth, J., and Hoi, W. G. (1986) Eur. J. Biochem. 154, 383-386
41. Burley, S. K, and Petsko, G. A. (1986) FEBS Lett. 32, 139-143
42. Scrutton, N. S., and Raine, A. R. (1996) Biochem. J. 319, 1-8
43. Kooystra, P. J., Kalk, K. H., and Hol, W. G. J. (1988) Eur. J. Biochem. 177, 345-349