Determinants of GATA-1 binding to DNA: The role of non-finger residues

Journal of Biological Chemistry

Volumn 278, Issue 46, 2003, Pages 45620-45628

  Ghirlando, Rodolfo ^a   Trainor, Cecelia D ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; DNA; PROTEINS; TISSUE; ZINC;

NANOMOLAR AFFINITIES; TRANSCRIPTION FACTORS;

BIOCHEMISTRY;

DNA; DNA BINDING PROTEIN; TRANSCRIPTION FACTOR GATA 1;

ARTICLE; BINDING AFFINITY; CELL MATURATION; CONSENSUS SEQUENCE; ERYTHROID CELL; ESCHERICHIA COLI; GEL MOBILITY SHIFT ASSAY; MAST CELL; MEGAKARYOCYTE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; SEQUENCE HOMOLOGY; ZINC FINGER MOTIF;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CHICKENS; DNA; DNA-BINDING PROTEINS; ERYTHROID-SPECIFIC DNA-BINDING FACTORS; GATA2 TRANSCRIPTION FACTOR; KINETICS; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; SEQUENCE HOMOLOGY, AMINO ACID; TIME FACTORS; TRANSCRIPTION FACTORS; ZINC FINGERS;

ESCHERICHIA COLI; MAMMALIA;

EID: 0242496340     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M306410200     Document Type: Article

References (46)

1. Tsai, S. F., Martin, D. I., Zon, L. I., D'Andrea, A. D., Wong, G. G., and Orkin, S. H. (1989) Nature 339, 446-451
2. Evans, T., and Felsenfeld, G. (1989) Cell 58, 877-885
3. Martin, D. I., and Orkin, S. H. (1990) Genes Dev. 4, 1886-1898
4. Omichinski, J. G., Trainor, C., Evans, T., Gronenborn, A. M., Clore, G. M., and Felsenfeld, G. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 1676-1680
5. Evans, T., and Felsenfeld, G. (1991) Mol. Cell. Biol. 11, 843-853
6. Tsai, S. F., Strauss, E., and Orkin, S. H. (1991) Genes Dev. 5, 919-931
7. Trainor, C. D., Omichinski, J. G., Vandergon, T. L., Gronenborn, A. M., Clore, G. M., and Felsenfeld, G. (1996) Mol. Cell. Biol. 16, 2238-2247
8. Trainor, C. D., Ghirlando, R., and Simpson, M. A. (2000) J. Biol. Chem. 275, 28157-28166
9. Newton, A., Mackay, J., and Crossley, M. (2001) J. Biol. Chem. 276, 35794-35801
10. Pedone, P. V., Omichinski, J. G., Nony, P., Trainor, C., Gronenborn, A. M., Clore, G. M., and Felsenfeld, G. (1997) EMBO J. 16, 2874-2882
11. Omichinski, J. G., Clore, G. M., Schaad, O., Felsenfeld, G., Trainor, C., Appella, E., Stahl, S. J., and Gronenborn, A. M. (1993) Science 261, 438-446
12. Starich, M. R., Wikström, M., Arst, H. N., Clore, G. M., and Gronenborn, A. M. (1998) J. Mol. Biol. 277, 605-620
13. Ko, L. J., and Engel, J. D. (1993) Mol. Cell. Biol. 13, 4011-4022
14. Whyatt, D. J., deBoer, E., and Grosveld, F. (1993) EMBO J. 12, 4993-5005
15. Merika, M., and Orkin, S. H. (1993) Mol. Cell. Biol. 13, 3999-4010
16. Yang, H. Y., and Evans, T. (1995) Mol. Cell. Biol. 15, 1353-1363
17. Dingwall, C., and Laskey, R. A. (1991) Trends Biochem. Sci. 16, 478-481
18. Umesono, K., and Evans, R. M. (1989) Cell 57, 1139-1146
19. Hannon, R., Evans, T., Felsenfeld, G., and Gould, H. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 3004-3008
20. Boyes, J., Omichinski, J., Clark, D., Pikaart, M., and Felsenfeld, G. (1998) J. Mol. Biol. 279, 529-544
21. Ghirlando, R., and Trainor, C. D. (2000) J. Biol. Chem. 275, 28152-28156
22. Mead, P. E., Deconinck, A. E., Huber, T. L., Orkin, S. H., and Zon, L. I. (2001) Development 128, 2301-2308
23. Wadman, I. A., Osada, H., Grutz, G. G., Agulnick, A. D., Westphal, H., Forster, A., and Rabbitts, T. H. (1997) EMBO J. 16, 3145-3157
24. Cantor, A. B., and Orkin, S. H. (2002) Oncogene 21, 3368-3376
25. Fujiwara, Y., Browne, C. P., Cunniff, K., Goff, S. C., and Orkin, S. H. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 12355-12358
26. Weiss, M. J., Yu, C., and Orkin, S. H. (1997) Mol. Cell. Biol. 17, 1642-1651
27. Shimizu, R., Takahashi, S., Ohneda, K., Engel, J. D., and Yamamoto, M. (2001) EMBO J. 20, 5250-5260
28. Crispino, J. D., Lodish, M. B., MacKay, J. P., and Orkin, S. H. (1999) Mol. Cell. 3, 219-228
29. Shivdasani, R. A., Fujiwara, Y., McDevitt, M. A., and Orkin, S. H. (1997) EMBO J. 16, 3965-3973
30. Takahashi, S., Komeno, T., Suwabe, N., Yoh, K., Nakajima, O., Nishimura, S., Kuroha, T., Nagasawa, T., and Yamamoto, M. (1998) Blood 92, 434-442
31. Migliaccio, A. R., Rana, R. A., Sanchez, M., Lorenzini, R., Centurione, L., Bianchi, L., Vannucchi, A. M., Migliaccio, G., and Orkin, S. H. (2003) J. Exp. Med. 197, 281-296
32. Nichols, K. E., Crispino, J. D., Poncz, M., White, J. G., Orkin, S. H., Maris, J. M., and Weiss, M. J. (2000) Nat. Genet. 24, 266-270
33. Yu, C., Niakan, K. K., Matsushita, M., Stamatoyannapoulos, G., Orkin, S. H., and Raskind, W. H. (2002) Blood 100, 2040-2045
34. Waltzer, L., Bataille, L., Peyrefitte, S., and Haenlin, M. (2002) EMBO J. 21, 5477-5486
35. Yu, C., Cantor, A. B., Yang, H., Browne, C., Wells, R. A., Fujiwara, Y., and Orkin, S. H. (2002) J. Exp. Med. 195, 1387-1395
36. Ohneda, K., Shimizu, R., Nishimura, S., Muraosa, Y., Takahashi, S., Engel, J. D., and Yamamoto, S. (2002) Genes Cells 7, 1243-1254
37. Schwartzbauer, G., Schlesinger, K., and Evans, T. (1992) Nucleic Acids Res. 20, 4429-4436
38. Vyas, P., McDevitt, M. A., Cantor, A. B., Katz, S. G., Fujiwara, Y., and Orkin, S. H. (1999) Development 126, 2799-2811
39. Ohneda, K, and Yamamoto, M. (2002) Acta Haematol. 108, 237-245
40. Chen, M. L., and Kuo, C. L. (2001) Eur. J. Immunol. 31, 1696-1705
41. Zhang, D. H., Yang, L., and Ray, A. (1998) J. Immunol. 161, 3817-3821
42. Takemoto, N., Arai, K., and Miyatake, S. (2002) J. Immunol. 169, 4103-4107
43. Lowry, J. A., and Atchley, W. R. (2000) J. Mol. Evol. 50, 103-115
44. Eisbacher, M., Holmes, M. L., Newton, A., Hogg, P. J., Khachigian, L. M., Crossley, M., and Chong, B. H. (2003) Mol. Cell. Biol. 23, 3427-3441
45. Crossley, M., Merika, M., and Orkin, S. H. (1995) Mol. Cell. Biol. 15, 2448-2456
46. Mackay, J. P., Kowalski, K., Fox, A. H., Czolij, R., King, G. F., and Crossley, M. (1998) J. Biol. Chem. 273, 30560-30567