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Volumn 5, Issue 11, 2003, Pages 1144-1154

Targeting clusters of transferred genes in Thermotoga maritima

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASES; ALCOHOL DEHYDROGENASE; BACTERIAL PROTEINS; BASE COMPOSITION; DNA, ARCHAEAL; DNA, BACTERIAL; DNA-BINDING PROTEINS; GENE LIBRARY; GENE ORDER; GENE TRANSFER, HORIZONTAL; GENES, ARCHAEAL; GENES, BACTERIAL; GENOMIC LIBRARY; GLYCOSIDE HYDROLASES; MOLECULAR SEQUENCE DATA; MUTS DNA MISMATCH-BINDING PROTEIN; PHYLOGENY; RHAMNOSE; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; THERMOTOGA MARITIMA;

EID: 0242424342     PISSN: 14622912     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1462-2920.2003.00515.x     Document Type: Article
Times cited : (16)

References (26)
  • 1
    • 0037458124 scopus 로고    scopus 로고
    • Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes
    • Andersson, J.O., Sjogren, A.M., Davis, L.A., Embley, T.M., and Roger, A.J. (2003) Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes. Curr Biol 13: 94-104.
    • (2003) Curr Biol , vol.13 , pp. 94-104
    • Andersson, J.O.1    Sjogren, A.M.2    Davis, L.A.3    Embley, T.M.4    Roger, A.J.5
  • 2
    • 0029780693 scopus 로고    scopus 로고
    • Unique chromosomal regions associated with virulence of an avian pathogenic Escherichia coli strain
    • Brown, P.K., Curtiss, R. 3rd (1996) Unique chromosomal regions associated with virulence of an avian pathogenic Escherichia coli strain. Proc Natl Acad Sci USA 93: 11149-11154.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 11149-11154
    • Brown, P.K.1    Curtiss III, R.2
  • 3
    • 0001972030 scopus 로고
    • Protocol 12: Purification of plasmids from thermophilic and hyperthermophilic Archaea
    • Place, A.R., (ed.). New York: Cold Spring Harbor Laboratory Press
    • Charbonnier, F., and Forterre, P. (1995) Protocol 12: Purification of plasmids from thermophilic and hyperthermophilic Archaea. In Archaea - a Laboratory Manual - Thermophiles. Place, A.R., (ed.). New York: Cold Spring Harbor Laboratory Press, pp. 87-90.
    • (1995) Archaea - A Laboratory Manual - Thermophiles , pp. 87-90
    • Charbonnier, F.1    Forterre, P.2
  • 6
    • 0036898759 scopus 로고    scopus 로고
    • Prokaryotic evolution in light of gene transfer
    • Gogarten, J.P., Doolittle, W.F., and Lawrence, J.G. (2002) Prokaryotic evolution in light of gene transfer. Mol Biol Evol 19: 2226-2238.
    • (2002) Mol Biol Evol , vol.19 , pp. 2226-2238
    • Gogarten, J.P.1    Doolittle, W.F.2    Lawrence, J.G.3
  • 7
    • 0036780601 scopus 로고    scopus 로고
    • F- and V-type ATPases in the hyperthermophilic bacterium Thermotoga neapolitana
    • Iida, T., Inatomi, K., Kamagata, Y., and Maruyama, T. (2002) F- and V-type ATPases in the hyperthermophilic bacterium Thermotoga neapolitana. Extremophiles 6: 369-375.
    • (2002) Extremophiles , vol.6 , pp. 369-375
    • Iida, T.1    Inatomi, K.2    Kamagata, Y.3    Maruyama, T.4
  • 8
    • 0034079802 scopus 로고    scopus 로고
    • Characterization of novel sequences from distantly related taxa by walking PCR
    • Katz, L.A., Curtis, E.A., Pfunder, M., and Landweber, L.F. (2000) Characterization of novel sequences from distantly related taxa by walking PCR. Mol Phylogenet Evol 14: 318-321.
    • (2000) Mol Phylogenet Evol , vol.14 , pp. 318-321
    • Katz, L.A.1    Curtis, E.A.2    Pfunder, M.3    Landweber, L.F.4
  • 9
    • 0034283229 scopus 로고    scopus 로고
    • Intraspecies variation in bacterial genomes: The need for a species genome concept
    • Lan, R., and Reeves, P.R. (2000) Intraspecies variation in bacterial genomes: the need for a species genome concept. Trends Microbiol 8: 396-401.
    • (2000) Trends Microbiol , vol.8 , pp. 396-401
    • Lan, R.1    Reeves, P.R.2
  • 10
    • 0030994798 scopus 로고    scopus 로고
    • Amelioration of bacterial genomes: Rates of change and exchange
    • Lawrence, J.G., and Ochman, H. (1997) Amelioration of bacterial genomes: rates of change and exchange. J Mol Evol 44: 383-397.
    • (1997) J Mol Evol , vol.44 , pp. 383-397
    • Lawrence, J.G.1    Ochman, H.2
  • 11
    • 0036145420 scopus 로고    scopus 로고
    • Reconciling the many faces of lateral gene transfer
    • Lawrence, J.G., and Ochman, H. (2002) Reconciling the many faces of lateral gene transfer. Trends Microbiol 10: 1-4.
    • (2002) Trends Microbiol , vol.10 , pp. 1-4
    • Lawrence, J.G.1    Ochman, H.2
  • 12
    • 0036006036 scopus 로고    scopus 로고
    • Comparison of ribitol and glycerol teichoic acid genes in Bacillus subtilis W23 and 168: Identical function, similar divergent organization, but different regulation
    • Lazarevic, V., Abellan, F.X., Moller, S.B., Karamata, D., and Mauel, C. (2002) Comparison of ribitol and glycerol teichoic acid genes in Bacillus subtilis W23 and 168: identical function, similar divergent organization, but different regulation. Microbiology 148: 815-824.
    • (2002) Microbiology , vol.148 , pp. 815-824
    • Lazarevic, V.1    Abellan, F.X.2    Moller, S.B.3    Karamata, D.4    Mauel, C.5
  • 13
    • 0033828363 scopus 로고    scopus 로고
    • Genetic variation of dTDP-L-rhamnose pathway genes in Salmonella enterica
    • Li, Q., and Reeves, P.R. (2000) Genetic variation of dTDP-L-rhamnose pathway genes in Salmonella enterica. Microbiology 146: 2291-2307.
    • (2000) Microbiology , vol.146 , pp. 2291-2307
    • Li, Q.1    Reeves, P.R.2
  • 14
    • 0034618612 scopus 로고    scopus 로고
    • A gene cluster for the synthesis of serotype d-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans
    • Nakano, Y., Yoshida, Y., Suzuki, N., Yamashita, Y., and Koga, T. (2000) A gene cluster for the synthesis of serotype d-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans. Biochim Biophys Acta 1493: 259-263.
    • (2000) Biochim Biophys Acta , vol.1493 , pp. 259-263
    • Nakano, Y.1    Yoshida, Y.2    Suzuki, N.3    Yamashita, Y.4    Koga, T.5
  • 15
    • 0033609333 scopus 로고    scopus 로고
    • Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
    • Nelson, K.E., Clayton, R.A., Gill, S.R., Gwinn, M.L., Dodson, R.J., Haft, D.H. et al. (1999) Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399: 323-329.
    • (1999) Nature , vol.399 , pp. 323-329
    • Nelson, K.E.1    Clayton, R.A.2    Gill, S.R.3    Gwinn, M.L.4    Dodson, R.J.5    Haft, D.H.6
  • 16
    • 0035106010 scopus 로고    scopus 로고
    • Phylogenetic analyses of two 'archaeal' genes in Thermotoga maritima reveal multiple transfers between archaea and bacteria
    • Nesbø, C.L., L'Haridon, S., Stetter, K.O., and Doolittle, W.F. (2001) Phylogenetic analyses of two 'archaeal' genes in Thermotoga maritima reveal multiple transfers between archaea and bacteria. Mol Biol Evol 18: 362-375.
    • (2001) Mol Biol Evol , vol.18 , pp. 362-375
    • Nesbø, C.L.1    L'Haridon, S.2    Stetter, K.O.3    Doolittle, W.F.4
  • 17
    • 0036335361 scopus 로고    scopus 로고
    • Suppressive subtractive hybridization detects extensive genomic diversity in Thermotoga maritime
    • Nesbø, C.L., Nelson, K.E., and Doolittle, W.F. (2002) Suppressive subtractive hybridization detects extensive genomic diversity in Thermotoga maritime. J Bacteriol 184: 4475-4488.
    • (2002) J Bacteriol , vol.184 , pp. 4475-4488
    • Nesbø, C.L.1    Nelson, K.E.2    Doolittle, W.F.3
  • 18
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., Lawrence, J.G., and Groisman, E.A. (2000) Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 19
    • 0037168552 scopus 로고    scopus 로고
    • Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning
    • Ohnishi, M., Terajima, J., Kurokawa, K., Nakayama, K., Murata, T., Tamura, K. et al. (2002) Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning. Proc Natl Acad Sci USA 99: 17043-17048.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 17043-17048
    • Ohnishi, M.1    Terajima, J.2    Kurokawa, K.3    Nakayama, K.4    Murata, T.5    Tamura, K.6
  • 22
    • 0037195083 scopus 로고    scopus 로고
    • The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract
    • Schell, M.A., Karmirantzou, M., Snel, B., Vilanova, D., Berger, B., Pessi, G. et al. (2002) The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract. Proc Natl Acad Sci USA 99: 14422-14427.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 14422-14427
    • Schell, M.A.1    Karmirantzou, M.2    Snel, B.3    Vilanova, D.4    Berger, B.5    Pessi, G.6
  • 23
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
    • Strimmer, K., and von Haeseler, A. (1996) Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol Biol Evol 13: 964-969.
    • (1996) Mol Biol Evol , vol.13 , pp. 964-969
    • Strimmer, K.1    Von Haeseler, A.2
  • 24
    • 0033768060 scopus 로고    scopus 로고
    • Acquisition of the rfb-gnd cluster in evolution of Escherichia coli O55 and O157
    • Tarr, P.I., Schoening, L.M., Yea, Y.L., Ward, T.R., Jelacic, S., and Whittam, T.S. (2000) Acquisition of the rfb-gnd cluster in evolution of Escherichia coli O55 and O157. J Bacteriol 182: 6183-6191.
    • (2000) J Bacteriol , vol.182 , pp. 6183-6191
    • Tarr, P.I.1    Schoening, L.M.2    Yea, Y.L.3    Ward, T.R.4    Jelacic, S.5    Whittam, T.S.6
  • 25
    • 0033956060 scopus 로고    scopus 로고
    • The COG database: A tool for genome-scale analysis of protein functions and evolution
    • Tatusov, R.L., Galperin, M.Y., Natale, D.A., and Koonin, E.V. (2000) The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res 28: 33-36.
    • (2000) Nucleic Acids Res , vol.28 , pp. 33-36
    • Tatusov, R.L.1    Galperin, M.Y.2    Natale, D.A.3    Koonin, E.V.4
  • 26
    • 0037168538 scopus 로고    scopus 로고
    • Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli
    • Welch, R.A., Burland, V., Plunkett, G., 3rd, Redford, P., Roesch, P., Rasko, D. et al. (2002) Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc Natl Acad Sci USA 99: 17020-17024.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 17020-17024
    • Welch, R.A.1    Burland, V.2    Plunkett III, G.3    Redford, P.4    Roesch, P.5    Rasko, D.6


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