메뉴 건너뛰기




Volumn 315, Issue 1, 2003, Pages 174-183

Common RNA replication signals exist among group 2 coronaviruses: Evidence for in vivo recombination between animal and human coronavius molecules

Author keywords

DI RNA; Group 2 coronaviruses; Leader switching; RdRp promoter; Recombination between human and animal coronaviruses; RNA replication signals

Indexed keywords

VIRUS RNA;

EID: 0242299781     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0042-6822(03)00511-7     Document Type: Article
Times cited : (38)

References (49)
  • 1
    • 0031041457 scopus 로고    scopus 로고
    • Episodic evolution mediates interspecies transfer of a murine coronavirus
    • Baric R.S., Yount B., Hensley L., Peel S.A., Chen W. Episodic evolution mediates interspecies transfer of a murine coronavirus. J. Virol. 71:1997;1946-1955.
    • (1997) J. Virol. , vol.71 , pp. 1946-1955
    • Baric, R.S.1    Yount, B.2    Hensley, L.3    Peel, S.A.4    Chen, W.5
  • 2
    • 0031441843 scopus 로고    scopus 로고
    • Recombination and coronavirus defective interfering RNAs
    • Brian D.A., Spaan W.J.M. Recombination and coronavirus defective interfering RNAs. Semin. Virol. 8:1997;101-111.
    • (1997) Semin. Virol. , vol.8 , pp. 101-111
    • Brian, D.A.1    Spaan, W.J.M.2
  • 4
    • 0029872237 scopus 로고    scopus 로고
    • Cis requirement for N-specific protein sequence in bovine coronavirus defective interfering RNA replication
    • Chang R.-Y., Brian D.A. cis requirement for N-specific protein sequence in bovine coronavirus defective interfering RNA replication. J. Virol. 70:1996;2201-2207.
    • (1996) J. Virol. , vol.70 , pp. 2201-2207
    • Chang, R.-Y.1    Brian, D.A.2
  • 5
    • 0027997834 scopus 로고
    • A cis-acting function for the coronavirus leader in defective interfering RNA replication
    • Chang R.-Y., Hofmann M.A., Sethna P.B., Brian D.A. A cis-acting function for the coronavirus leader in defective interfering RNA replication. J. Virol. 68:1994;8223-8231.
    • (1994) J. Virol. , vol.68 , pp. 8223-8231
    • Chang, R.-Y.1    Hofmann, M.A.2    Sethna, P.B.3    Brian, D.A.4
  • 6
    • 0029880854 scopus 로고    scopus 로고
    • The UCUAAAC promoter motif is not required for high-frequency leader recombination in bovine coronavirus defective interfering RNA
    • Chang R.-Y., Krishnan R., Brian D.A. The UCUAAAC promoter motif is not required for high-frequency leader recombination in bovine coronavirus defective interfering RNA. J. Virol. 70:1996;2720-2729.
    • (1996) J. Virol. , vol.70 , pp. 2720-2729
    • Chang, R.-Y.1    Krishnan, R.2    Brian, D.A.3
  • 7
    • 0025155473 scopus 로고
    • Cytoplasmic expression system based on constitutive synthesis of bacteriophage T7 RNA polymerase in mammalian cells
    • Elroy-Stein O., Moss B. Cytoplasmic expression system based on constitutive synthesis of bacteriophage T7 RNA polymerase in mammalian cells. Proc. Natl. Acad. Sci., USA. 87:1990;6743-6747.
    • (1990) Proc. Natl. Acad. Sci., USA , vol.87 , pp. 6743-6747
    • Elroy-Stein, O.1    Moss, B.2
  • 10
    • 0034211040 scopus 로고    scopus 로고
    • Turkey coronavirus is more closely related to avian infectious bronchitis virus than to mammalian coronaviruses: A review
    • Guy J.D. Turkey coronavirus is more closely related to avian infectious bronchitis virus than to mammalian coronaviruses a review . Avian Pathol. 29:2000;207-212.
    • (2000) Avian Pathol. , vol.29 , pp. 207-212
    • Guy, J.D.1
  • 12
    • 0031958109 scopus 로고    scopus 로고
    • Feline coronavirus type II strains 79-1683 and 79-1146 originate from a double recombination between feline coronavirus type I and canine coronavirus
    • Herrewegh A.A., I. Smeenk I., Horzinek M.C., Rottier P.J., de Groot R.J. Feline coronavirus type II strains 79-1683 and 79-1146 originate from a double recombination between feline coronavirus type I and canine coronavirus. J. Virol. 72:1998;4508-4514.
    • (1998) J. Virol. , vol.72 , pp. 4508-4514
    • Herrewegh, A.A.1    I. Smeenk, I.2    Horzinek, M.C.3    Rottier, P.J.4    De Groot, R.J.5
  • 13
    • 0027055554 scopus 로고
    • Signal, noise, and reliability in molecular phylogenetic analyses
    • Hillis D.M., Hulsenbeck J.P. Signal, noise, and reliability in molecular phylogenetic analyses. J. Hered. 83:1992;189-195.
    • (1992) J. Hered. , vol.83 , pp. 189-195
    • Hillis, D.M.1    Hulsenbeck, J.P.2
  • 14
    • 0027248544 scopus 로고
    • Leader-mRNA junction sequences are unique for each subgenomic mRNA species in the bovine coronavirus and remain so throughout persistent infection
    • Hofmann M.A., Chang R.-Y., Ku S., Brian D.A. Leader-mRNA junction sequences are unique for each subgenomic mRNA species in the bovine coronavirus and remain so throughout persistent infection. Virology. 196:1993;163-171.
    • (1993) Virology , vol.196 , pp. 163-171
    • Hofmann, M.A.1    Chang, R.-Y.2    Ku, S.3    Brian, D.A.4
  • 15
    • 0022503854 scopus 로고
    • Structural proteins of the human coronavirus OC43
    • Hogue B.G., Brian D.A. Structural proteins of the human coronavirus OC43. Virus Res. 5:1986;131-144.
    • (1986) Virus Res. , vol.5 , pp. 131-144
    • Hogue, B.G.1    Brian, D.A.2
  • 16
    • 0033927571 scopus 로고    scopus 로고
    • Characterization of an essential RNA secondary structure in the 3′ untranslated region of murine coronavirus genome
    • Hsue B., Hartshorne T., Masters P.S. Characterization of an essential RNA secondary structure in the 3′ untranslated region of murine coronavirus genome. J. Virol. 74:2000;6911-6921.
    • (2000) J. Virol. , vol.74 , pp. 6911-6921
    • Hsue, B.1    Hartshorne, T.2    Masters, P.S.3
  • 17
    • 0030768788 scopus 로고    scopus 로고
    • A bulged stem-loop structure in the 3′ untranslated region of the genome of the coronavirus mouse hepatitis virus is essential for replication
    • Hsue B., Masters P.S. A bulged stem-loop structure in the 3′ untranslated region of the genome of the coronavirus mouse hepatitis virus is essential for replication. J. Virol. 71:1997;7567-7578.
    • (1997) J. Virol. , vol.71 , pp. 7567-7578
    • Hsue, B.1    Masters, P.S.2
  • 18
    • 0029108556 scopus 로고
    • A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains
    • Jia W., Karaca K., Parrish C.R., Naqi S.A. A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains. Arch. Virol. 140:1995;259-271.
    • (1995) Arch. Virol. , vol.140 , pp. 259-271
    • Jia, W.1    Karaca, K.2    Parrish, C.R.3    Naqi, S.A.4
  • 20
    • 0027359193 scopus 로고
    • Analysis of cis-acting sequences essential for coronavirus defective interfering RNA replication
    • Kim Y.N., Song Y.S., Makino S. Analysis of cis-acting sequences essential for coronavirus defective interfering RNA replication. Virology. 197:1993;53-63.
    • (1993) Virology , vol.197 , pp. 53-63
    • Kim, Y.N.1    Song, Y.S.2    Makino, S.3
  • 21
    • 0032901056 scopus 로고    scopus 로고
    • Identification of a coronavirus hemagglutinin-esterase with a substrate specificity different from those of influenza C virus and bovine coronavirus
    • Klausegger A., Strobl B., Regl G., Kaser A., Luytjes W., Vlasak R. Identification of a coronavirus hemagglutinin-esterase with a substrate specificity different from those of influenza C virus and bovine coronavirus. J. Virol. 73:1999;3737-3743.
    • (1999) J. Virol. , vol.73 , pp. 3737-3743
    • Klausegger, A.1    Strobl, B.2    Regl, G.3    Kaser, A.4    Luytjes, W.5    Vlasak, R.6
  • 22
    • 0028880390 scopus 로고
    • Experimental evidence of recombination in coronavirus infectious bronchitis virus
    • Kottier S.A., Cavanagh D., Britton P. Experimental evidence of recombination in coronavirus infectious bronchitis virus. Virology. 213:1995;569-580.
    • (1995) Virology , vol.213 , pp. 569-580
    • Kottier, S.A.1    Cavanagh, D.2    Britton, P.3
  • 23
    • 0029946796 scopus 로고    scopus 로고
    • Tandem placement of a coronavirus promoter results in enhanced mRNA synthesis from the downstream-most initiation site
    • Krishnan R., Chang R.-Y., Brian D.A. Tandem placement of a coronavirus promoter results in enhanced mRNA synthesis from the downstream-most initiation site. Virology. 218:1996;400-405.
    • (1996) Virology , vol.218 , pp. 400-405
    • Krishnan, R.1    Chang, R.-Y.2    Brian, D.A.3
  • 24
    • 0033982337 scopus 로고    scopus 로고
    • Retargeting of coronavirus by substitution of the spike glycoprotein ectodomain: Crossing the host cell species barrier
    • Kuo L., Godeke G.-J., Raamsman M.J.B., Masters P.S., Rottier P.J.M. Retargeting of coronavirus by substitution of the spike glycoprotein ectodomain crossing the host cell species barrier . J. Virol. 74:2000;1393-14006.
    • (2000) J. Virol. , vol.74 , pp. 1393-14006
    • Kuo, L.1    Godeke, G.-J.2    Raamsman, M.J.B.3    Masters, P.S.4    Rottier, P.J.M.5
  • 25
    • 0026602984 scopus 로고
    • RNA recombination in animal and plant viruses
    • Lai M.M.C. RNA recombination in animal and plant viruses. Microbiol. Rev. 56:1992;61-79.
    • (1992) Microbiol. Rev. , vol.56 , pp. 61-79
    • Lai, M.M.C.1
  • 26
    • 0030633479 scopus 로고    scopus 로고
    • The molecular biology of coronaviruses
    • Lai M.M.C., Cavanagh D. The molecular biology of coronaviruses. Adv. Virus Res. 48:1997;1-100.
    • (1997) Adv. Virus Res. , vol.48 , pp. 1-100
    • Lai, M.M.C.1    Cavanagh, D.2
  • 27
    • 0023128419 scopus 로고
    • Sequence analysis of the bovine coronavirus nucleocapsid and matrix protein genes
    • Lapps W., Hogue B.G., Brian D.A. Sequence analysis of the bovine coronavirus nucleocapsid and matrix protein genes. Virology. 157:1987;47-57.
    • (1987) Virology , vol.157 , pp. 47-57
    • Lapps, W.1    Hogue, B.G.2    Brian, D.A.3
  • 28
    • 0028061645 scopus 로고
    • Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: Implications for the role of minus-strand RNA in RNA replication and transcription
    • Lin Y.J., Liao C.L., Lai M.M.C. Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus implications for the role of minus-strand RNA in RNA replication and transcription . J. Virol. 68:1994;8131-8140.
    • (1994) J. Virol. , vol.68 , pp. 8131-8140
    • Lin, Y.J.1    Liao, C.L.2    Lai, M.M.C.3
  • 29
    • 0035198116 scopus 로고    scopus 로고
    • Secondary structural elements within the 3′ untranslated region of mouse hepatitis virus strain JHM genomic RNA
    • Liu Q., Johnson R.F., Leibowitz J.L. Secondary structural elements within the 3′ untranslated region of mouse hepatitis virus strain JHM genomic RNA. J. Virol. 75:2001;12105-12113.
    • (2001) J. Virol. , vol.75 , pp. 12105-12113
    • Liu, Q.1    Johnson, R.F.2    Leibowitz, J.L.3
  • 30
    • 0026039915 scopus 로고
    • A system for study of coronavirus mRNA synthesis: A regulated, expressed subgenomic defective interfering RNA results from intergenic site insertion
    • Makino S., Joo M., Makino J.K. A system for study of coronavirus mRNA synthesis a regulated, expressed subgenomic defective interfering RNA results from intergenic site insertion . J. Virol. 65:1991;3304-3311.
    • (1991) J. Virol. , vol.65 , pp. 3304-3311
    • Makino, S.1    Joo, M.2    Makino, J.K.3
  • 31
    • 0024434273 scopus 로고
    • High-frequency leader sequence switching during coronavirus defective interfering RNA replication
    • Makino S., Lai M.M.C. High-frequency leader sequence switching during coronavirus defective interfering RNA replication. J. Virol. 63:1989;5285-5292.
    • (1989) J. Virol. , vol.63 , pp. 5285-5292
    • Makino, S.1    Lai, M.M.C.2
  • 32
    • 0015289396 scopus 로고
    • Characteristics of a coronavirus (strain 67N) of Pigs
    • Mengeling W.L., Boothe A.D., Ritche A.E. Characteristics of a coronavirus (strain 67N) of Pigs. Am. J. Vet. Res. 33:1972;297-308.
    • (1972) Am. J. Vet. Res. , vol.33 , pp. 297-308
    • Mengeling, W.L.1    Boothe, A.D.2    Ritche, A.E.3
  • 34
    • 0034905254 scopus 로고    scopus 로고
    • Downstream sequences influence the choice between a naturally-occurring noncanonical and closely positioned upstream canonical heptameric fusion motif during bovine coronavirus subgenomic mRNA synthesis
    • Ozdarendeli A., Ku S., Rochat S., Williams G.D., Senanayake S.D., Brian D.A. Downstream sequences influence the choice between a naturally-occurring noncanonical and closely positioned upstream canonical heptameric fusion motif during bovine coronavirus subgenomic mRNA synthesis. J. Virol. 75:2001;7362-7374.
    • (2001) J. Virol. , vol.75 , pp. 7362-7374
    • Ozdarendeli, A.1    Ku, S.2    Rochat, S.3    Williams, G.D.4    Senanayake, S.D.5    Brian, D.A.6
  • 35
    • 0037942817 scopus 로고    scopus 로고
    • Stem-loop III in the 5′ untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication
    • Raman S., Bouma P., Williams G.D., Brian D.A. Stem-loop III in the 5′ untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication. J. Virol. 77:2003;6720-6730.
    • (2003) J. Virol. , vol.77 , pp. 6720-6730
    • Raman, S.1    Bouma, P.2    Williams, G.D.3    Brian, D.A.4
  • 36
    • 0037561920 scopus 로고    scopus 로고
    • Rota, P. A., Oberste, M. S., Monroe, S. S., Nix, W. A., Campagnoli, R., Icenogle, J. P., Peñaranda, S., Bankamp, B., Maher, K., Chen, M., Tong, S., Tamin, A., Lowe, L., Frace, M., DeRisi, J. L., Chen, Q., Wang, D., Erdman, D. D., Peret, T. C. T., Burns, C., Ksiazek, T. G., Rollin, P. E., Sanchez, A., Liffick, S., Holloway, B., Limor, L., McCaustland, K., Olsen-Rassmussen, M., Fouchier, R., Günther, S., Osterhaus, A. D. M. E., Drosten, C., Pallansch, M. A., Anderson, L. A., Bellini, W. J. 2003. Characterization of a novel coronavirus associated with severe acute respiratory syndrome. Published online May 1 2003; 10.1126/science.1085952 (Science Express Research Articles)
    • Rota, P. A., Oberste, M. S., Monroe, S. S., Nix, W. A., Campagnoli, R., Icenogle, J. P., Peñaranda, S., Bankamp, B., Maher, K., Chen, M., Tong, S., Tamin, A., Lowe, L., Frace, M., DeRisi, J. L., Chen, Q., Wang, D., Erdman, D. D., Peret, T. C. T., Burns, C., Ksiazek, T. G., Rollin, P. E., Sanchez, A., Liffick, S., Holloway, B., Limor, L., McCaustland, K., Olsen-Rassmussen, M., Fouchier, R., Günther, S., Osterhaus, A. D. M. E., Drosten, C., Pallansch, M. A., Anderson, L. A., Bellini, W. J. 2003. Characterization of a novel coronavirus associated with severe acute respiratory syndrome. Published online May 1 2003; 10.1126/science.1085952 (Science Express Research Articles).
  • 37
    • 0032844923 scopus 로고    scopus 로고
    • Translation from the 5′ untranslated region (UTR) of mRNA 1 is repressed, but that from the 5′ UTR of mRNA 7 is stimulated in coronavirus-infected cells
    • Senanayake S.D., Brian D.A. Translation from the 5′ untranslated region (UTR) of mRNA 1 is repressed, but that from the 5′ UTR of mRNA 7 is stimulated in coronavirus-infected cells. J. Virol. 73:1999;8003-8009.
    • (1999) J. Virol. , vol.73 , pp. 8003-8009
    • Senanayake, S.D.1    Brian, D.A.2
  • 38
    • 0002000418 scopus 로고
    • The Coronaviridae, An Introduction
    • S.G. Siddell. New York, London: Plenum Press
    • Siddell S.G. The Coronaviridae, An Introduction. Siddell S.G. The Coronaviridae. 1995;1-10 Plenum Press, New York, London.
    • (1995) The Coronaviridae , pp. 1-10
    • Siddell, S.G.1
  • 39
  • 40
    • 0034122512 scopus 로고    scopus 로고
    • Host protein interactions with the 3′ end of the bovine coronavirus RNA and the requirement of the poly(A) tail for coronavirus defective genome replication
    • Spagnolo J.F., Hogue B.J. Host protein interactions with the 3′ end of the bovine coronavirus RNA and the requirement of the poly(A) tail for coronavirus defective genome replication. J. Virol. 74:2000;5053-5065.
    • (2000) J. Virol. , vol.74 , pp. 5053-5065
    • Spagnolo, J.F.1    Hogue, B.J.2
  • 42
    • 0016364217 scopus 로고
    • Cultural and antigenic properties of newly established cell strains derived from adenocarcinomas of the human colon and rectum
    • Tompkins W.A.F., Watrach A.M., Schmale J.D., Schulze R.M., Harris J.A. Cultural and antigenic properties of newly established cell strains derived from adenocarcinomas of the human colon and rectum. J. Natl. Cancer Inst. 52:1974;1101-1106.
    • (1974) J. Natl. Cancer Inst. , vol.52 , pp. 1101-1106
    • Tompkins, W.A.F.1    Watrach, A.M.2    Schmale, J.D.3    Schulze, R.M.4    Harris, J.A.5
  • 43
    • 0028278092 scopus 로고
    • Subgenomic RNA synthesis directed by a synthetic defective interfering RNA of mouse hepatitis virus: A study of coronavirus transcription initiation
    • van der Most R.G., de Groot R.J., Spaan W.J.M. Subgenomic RNA synthesis directed by a synthetic defective interfering RNA of mouse hepatitis virus a study of coronavirus transcription initiation . J. Virol. 65:1994;3656-3666.
    • (1994) J. Virol , vol.65 , pp. 3656-3666
    • Van Der Most, R.G.1    De Groot, R.J.2    Spaan, W.J.M.3
  • 44
    • 0031017109 scopus 로고    scopus 로고
    • An infectious arterivirus cDNA clone: Identification of a replicase point mutation that abolishes discontinuous mRNA transcription
    • van Dinten L.C., den Boon J.A., Wassenaar A.L.M., Spaan W.J.M., Snijder E.J. An infectious arterivirus cDNA clone identification of a replicase point mutation that abolishes discontinuous mRNA transcription . Proc. Natl. Acad. Sci. USA. 94:1997;991-996.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 991-996
    • Van Dinten, L.C.1    Den Boon, J.A.2    Wassenaar, A.L.M.3    Spaan, W.J.M.4    Snijder, E.J.5
  • 45
    • 0033910862 scopus 로고    scopus 로고
    • Primary structure of the sialodacryoadenitis virus genome: Sequence of the structural-protein region and its application for differential diagnosis
    • Yoo D., Pei Y., Christie N., Cooper M. Primary structure of the sialodacryoadenitis virus genome sequence of the structural-protein region and its application for differential diagnosis . Clin. Diagn. Lab. Immunol. 7:2000;568-573.
    • (2000) Clin. Diagn. Lab. Immunol. , vol.7 , pp. 568-573
    • Yoo, D.1    Pei, Y.2    Christie, N.3    Cooper, M.4
  • 46
    • 0032827591 scopus 로고    scopus 로고
    • A phylogenetically conserved hairpin-type 3′ untranslated region pseudoknot functions in coronavirus RNA replication
    • Williams G.D., Chang R.-Y., Brian D.A. A phylogenetically conserved hairpin-type 3′ untranslated region pseudoknot functions in coronavirus RNA replication. J. Virol. 73:1999;8349-8355.
    • (1999) J. Virol. , vol.73 , pp. 8349-8355
    • Williams, G.D.1    Chang, R.-Y.2    Brian, D.A.3
  • 47
    • 0036171471 scopus 로고    scopus 로고
    • The sialate-4-O-acetylesterases of coronaviruses related to mouse hepatitis virus: A proposal to reorganize group 2 Coronaviridae
    • Wurzer W.J., Obojes K., Vlasak R. The sialate-4-O-acetylesterases of coronaviruses related to mouse hepatitis virus a proposal to reorganize group 2 Coronaviridae . J. Gen. Virol. 83:2002;395-402.
    • (2002) J. Gen. Virol. , vol.83 , pp. 395-402
    • Wurzer, W.J.1    Obojes, K.2    Vlasak, R.3
  • 48
    • 0030028804 scopus 로고    scopus 로고
    • A 5′-proximal RNA sequence of murine coronavirus as a potential initiation site for genomic-length mRNA transcription
    • Zhang X., Lai M.M.C. A 5′-proximal RNA sequence of murine coronavirus as a potential initiation site for genomic-length mRNA transcription. J. Virol. 70:1996;705-711.
    • (1996) J. Virol. , vol.70 , pp. 705-711
    • Zhang, X.1    Lai, M.M.C.2
  • 49
    • 0028097306 scopus 로고
    • Biological and genetic characterization of a hemagglutinating coronavirus isolated from a diarrhoeic child
    • Zhang X.M., Herbst W., Kousoulas K.G., Stortz J. Biological and genetic characterization of a hemagglutinating coronavirus isolated from a diarrhoeic child. J. Med. Virol. 44:1994;152-161.
    • (1994) J. Med. Virol. , vol.44 , pp. 152-161
    • Zhang, X.M.1    Herbst, W.2    Kousoulas, K.G.3    Stortz, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.