메뉴 건너뛰기




Volumn 71, Issue 10, 1997, Pages 7567-7578

A bulged stem-loop structure in the 3' untranslated region of the genome of the coronavirus mouse hepatitis virus is essential for replication

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SUBSTITUTION; ARTICLE; CORONAVIRUS; DELETION MUTANT; GENETIC RECOMBINATION; HEPATITIS VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; RNA SEQUENCE; RNA TRANSLATION; VIRUS GENOME; VIRUS REPLICATION; VIRUS TRANSCRIPTION;

EID: 0030768788     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.10.7567-7578.1997     Document Type: Article
Times cited : (98)

References (47)
  • 1
    • 0027997834 scopus 로고
    • A cis-acting function for the coronavirus leader in defective interfering RNA replication
    • Chang, R.-Y., M. A. Hofmann, P. B. Sethna, and D. A. Brian. 1994. A cis-acting function for the coronavirus leader in defective interfering RNA replication. J. Virol. 68:8223-8231.
    • (1994) J. Virol. , vol.68 , pp. 8223-8231
    • Chang, R.-Y.1    Hofmann, M.A.2    Sethna, P.B.3    Brian, D.A.4
  • 2
    • 0023867120 scopus 로고
    • Sequence and analysis of bovine enteritic coronavirus (F15) genome. I. Sequence of the gene coding for the nucleocapsid protein: Analysis of the predicted protein
    • Cruciere, C., and J. Laporte. 1988. Sequence and analysis of bovine enteritic coronavirus (F15) genome. I. Sequence of the gene coding for the nucleocapsid protein: analysis of the predicted protein. Ann. Inst. Pasteur Virol. 139:123-138.
    • (1988) Ann. Inst. Pasteur Virol. , vol.139 , pp. 123-138
    • Cruciere, C.1    Laporte, J.2
  • 3
    • 0026697434 scopus 로고
    • The fitness of defective interfering murine coronavirus DI-a and its derivatives is decreased hy nonsense and frameshift mutations
    • De Groot, R. J., R. G. van der Most, and W. J. M. Spaan. 1992. The fitness of defective interfering murine coronavirus DI-a and its derivatives is decreased hy nonsense and frameshift mutations. J. Virol. 66:5898-5905.
    • (1992) J. Virol. , vol.66 , pp. 5898-5905
    • De Groot, R.J.1    Van der Most, R.G.2    Spaan, W.J.M.3
  • 4
    • 0025130645 scopus 로고
    • An improved method for sequencing of RNA templates
    • Fichot, O., and M. Girard. 1990. An improved method for sequencing of RNA templates. Nucleic Acids Res. 18:6162.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6162
    • Fichot, O.1    Girard, M.2
  • 5
    • 0031026431 scopus 로고    scopus 로고
    • The internal open reading frame within the nucleocapsid gene of mouse hepatitis virus encodes a structural protein that is not essential for viral replication
    • Fischer, F., D. Peng, S. T. Hingley, S. R. Weiss, and P. S. Masters. 1997. The internal open reading frame within the nucleocapsid gene of mouse hepatitis virus encodes a structural protein that is not essential for viral replication. J. Virol. 71:996-1003.
    • (1997) J. Virol. , vol.71 , pp. 996-1003
    • Fischer, F.1    Peng, D.2    Hingley, S.T.3    Weiss, S.R.4    Masters, P.S.5
  • 8
    • 0025930567 scopus 로고
    • The 5′ end of coronavirus minusstrand RNAs contains a short poly(U) tract
    • Hofmann, M. A., and D. A. Brian. 1991. The 5′ end of coronavirus minusstrand RNAs contains a short poly(U) tract. J. Virol. 65:6331-6333.
    • (1991) J. Virol. , vol.65 , pp. 6331-6333
    • Hofmann, M.A.1    Brian, D.A.2
  • 9
    • 0027144777 scopus 로고
    • A translation-attenuating intraleader open reading frame is selected on coronavirus mRNAs during persistent infection
    • Hofmann, M. A., S. D. Senanayake, and D. A. Brian. 1993. A translation-attenuating intraleader open reading frame is selected on coronavirus mRNAs during persistent infection. Proc. Natl. Acad. Sci. USA 90:11733-11737.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 11733-11737
    • Hofmann, M.A.1    Senanayake, S.D.2    Brian, D.A.3
  • 10
    • 0027229229 scopus 로고
    • Biochemical and genetic evidence for a pseudoknot structure at the 3′ terminus of the polio-virus RNA genome and its role in viral RNA amplification
    • Jacobson, S. J., D. A. M. Konings, and P. Sarnow. 1993. Biochemical and genetic evidence for a pseudoknot structure at the 3′ terminus of the polio-virus RNA genome and its role in viral RNA amplification. J. Virol. 67:2961-2971.
    • (1993) J. Virol. , vol.67 , pp. 2961-2971
    • Jacobson, S.J.1    Konings, D.A.M.2    Sarnow, P.3
  • 11
    • 0024574864 scopus 로고
    • Sequence analysis of nucleocapsid gene and leader RNA of human coronavirus OC43
    • Kamahora, T., L. H. Soe, and M. M. C. Lai. 1989. Sequence analysis of nucleocapsid gene and leader RNA of human coronavirus OC43. Virus Res. 12:1-9.
    • (1989) Virus Res , vol.12 , pp. 1-9
    • Kamahora, T.1    Soe, L.H.2    Lai, M.M.C.3
  • 12
    • 0027359193 scopus 로고
    • Analysis of cis-acting sequences essential for coronavirus defective interfering RNA replication
    • Kim, Y.-N., Y. S. Jeong, and S. Makino. 1993. Analysis of cis-acting sequences essential for coronavirus defective interfering RNA replication. Virology 197:53-63.
    • (1993) Virology , vol.197 , pp. 53-63
    • Kim, Y.-N.1    Jeong, Y.S.2    Makino, S.3
  • 13
    • 0027198498 scopus 로고
    • Generation and selection of coronavirus defective interfering RNA with large open reading frame by RNA recombination and possible editing
    • Kim, Y.-N., M. M. C. Lai, and S. Makino. 1993. Generation and selection of coronavirus defective interfering RNA with large open reading frame by RNA recombination and possible editing. Virology 194:244-253.
    • (1993) Virology , vol.194 , pp. 244-253
    • Kim, Y.-N.1    Lai, M.M.C.2    Makino, S.3
  • 14
    • 0018885456 scopus 로고
    • Mechanism of interferon action. Interferon-mcdiated inhibition of simian virus-40 early RNA accumulation
    • Kingsman, S. M., and C. E. Samuel. 1980. Mechanism of interferon action. Interferon-mcdiated inhibition of simian virus-40 early RNA accumulation. Virology 101:458-465.
    • (1980) Virology , vol.101 , pp. 458-465
    • Kingsman, S.M.1    Samuel, C.E.2
  • 15
    • 0026587624 scopus 로고
    • Repair and mutagenesis of the genome of a deletion mutant of the coronavirus mouse hepatitis virus by targeted RNA recombination
    • Koetzner, C. A., M. M. Parker, C. S. Ricard, L. S. Sturman, and P. S. Masters. 1992. Repair and mutagenesis of the genome of a deletion mutant of the coronavirus mouse hepatitis virus by targeted RNA recombination. J. Virol. 66:1841-1848.
    • (1992) J. Virol. , vol.66 , pp. 1841-1848
    • Koetzner, C.A.1    Parker, M.M.2    Ricard, C.S.3    Sturman, L.S.4    Masters, P.S.5
  • 16
    • 0025081218 scopus 로고
    • Coronavirus: Organization, replication and expression of genome
    • Lai, M. M. C. 1990. Coronavirus: organization, replication and expression of genome. Annu. Rev. Microbiol. 44:303-333.
    • (1990) Annu. Rev. Microbiol. , vol.44 , pp. 303-333
    • Lai, M.M.C.1
  • 17
    • 0026602984 scopus 로고
    • RNA recombination in animal and plant viruses
    • Lai, M. M. C. 1992. RNA recombination in animal and plant viruses. Microbiol. Rev. 56:61-79.
    • (1992) Microbiol. Rev. , vol.56 , pp. 61-79
    • Lai, M.M.C.1
  • 18
    • 0027184632 scopus 로고
    • Deletion mapping of a mouse hepatitis virus defective interfering RNA reveals the requirement of an internal and discontiguous sequence for replication
    • Lin, Y.-J., and M. M. C. Lai. 1993. Deletion mapping of a mouse hepatitis virus defective interfering RNA reveals the requirement of an internal and discontiguous sequence for replication. J. Virol. 67:6110-6118.
    • (1993) J. Virol. , vol.67 , pp. 6110-6118
    • Lin, Y.-J.1    Lai, M.M.C.2
  • 19
    • 0028061645 scopus 로고
    • Identification of the cu-acting signal for minus-strand RNA synthesis of a murine coronavirus: Implications for the role of minus-strand RNA in RNA replication and transcription
    • Lin, Y.-J., C.-L. Liao, and M. M. C. Lai. 1994. Identification of the cu-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription. J. Virol. 68:8131-8140.
    • (1994) J. Virol. , vol.68 , pp. 8131-8140
    • Lin, Y.-J.1    Liao, C.-L.2    Lai, M.M.C.3
  • 20
    • 0029836505 scopus 로고    scopus 로고
    • The 3′ untranslated region of coronavirus RNA is required for subgenomic mRNA transcription from a defective interfering RNA
    • Lin, Y.-J., X. Zhang, R.-C. Wu, and M. M. C. Lai. 1996. The 3′ untranslated region of coronavirus RNA is required for subgenomic mRNA transcription from a defective interfering RNA. J. Virol. 70:7236-7240.
    • (1996) J. Virol. , vol.70 , pp. 7236-7240
    • Lin, Y.-J.1    Zhang, X.2    Wu, R.-C.3    Lai, M.M.C.4
  • 21
    • 0030983657 scopus 로고    scopus 로고
    • A specific host cellular protein binding element near the 3′ end of mouse hepatitis virus genomic RNA
    • 20a.Liu, Q., W. Yu, and J. L. Leibowitz. 1997. A specific host cellular protein binding element near the 3′ end of mouse hepatitis virus genomic RNA. Virology 232:74-85.
    • (1997) Virology , vol.232 , pp. 74-85
    • Liu, Q.1    Yu, W.2    Leibowitz, J.L.3
  • 22
    • 0029664639 scopus 로고    scopus 로고
    • Replication of synthetic interfering RNAs derived from coronavirus mouse hepatitis virus-A59
    • Luytjes, W., H. Gerritsma, and W. J. M. Spaan. 1996. Replication of synthetic interfering RNAs derived from coronavirus mouse hepatitis virus-A59. Virology 216:174-183.
    • (1996) Virology , vol.216 , pp. 174-183
    • Luytjes, W.1    Gerritsma, H.2    Spaan, W.J.M.3
  • 23
    • 0021884764 scopus 로고
    • Structure of the intracellular defective viral RNAs of defective interfering particles of mouse hepatitis virus
    • Makino, S., N. Fujioka, and K. Fujiwara. 1985. Structure of the intracellular defective viral RNAs of defective interfering particles of mouse hepatitis virus. J. Virol. 54:329-336.
    • (1985) J. Virol. , vol.54 , pp. 329-336
    • Makino, S.1    Fujioka, N.2    Fujiwara, K.3
  • 24
    • 0023970258 scopus 로고
    • Defective interfering particles of murine coronavirus: Mechanism of synthesis of defectivc viral RNAs
    • Makino, S., C.-K. Shieh, J. G. Keck, and M. M. C. Lai. 1988. Defective interfering particles of murine coronavirus: mechanism of synthesis of defectivc viral RNAs. Virology 163:104-111.
    • (1988) Virology , vol.163 , pp. 104-111
    • Makino, S.1    Shieh, C.-K.2    Keck, J.G.3    Lai, M.M.C.4
  • 25
    • 0028091057 scopus 로고
    • Optimization of targeted RNA recombination and mapping of a novel nucleocapsid gene mutation in the coronavirus mouse hepatitis virus
    • Masters, P. S., C. A. Koetzner, C. A. Kerr, and Y. Heo. 1994. Optimization of targeted RNA recombination and mapping of a novel nucleocapsid gene mutation in the coronavirus mouse hepatitis virus. J. Virol. 68:328-337.
    • (1994) J. Virol. , vol.68 , pp. 328-337
    • Masters, P.S.1    Koetzner, C.A.2    Kerr, C.A.3    Heo, Y.4
  • 26
    • 0342902630 scopus 로고    scopus 로고
    • Molecular characterization of transmissible gastroenteritis coronavirus defective interfering genomes: Packaging and heterogeneity
    • Méndez, A., C. Smerdou, A. Izeta, F. Gebauer, and L. Enjuanes. 1996. Molecular characterization of transmissible gastroenteritis coronavirus defective interfering genomes: packaging and heterogeneity. Virology 217:495507.
    • (1996) Virology , vol.217 , pp. 495507
    • Méndez, A.1    Smerdou, C.2    Izeta, A.3    Gebauer, F.4    Enjuanes, L.5
  • 27
    • 0025043193 scopus 로고
    • Sequence comparison of the N genes of five strains of the coronavirus mouse hepatitis virus suggests a three domain structure for the nucleocapsid protein
    • Parker, M. M., and P. S. Masters. 1990. Sequence comparison of the N genes of five strains of the coronavirus mouse hepatitis virus suggests a three domain structure for the nucleocapsid protein. Virology 179:463-468.
    • (1990) Virology , vol.179 , pp. 463-468
    • Parker, M.M.1    Masters, P.S.2
  • 28
    • 0029009852 scopus 로고
    • Analysis of second-site revenants of a murine coronavirus nucleocapsid protein deletion mutant and construction of nucleocapsid protein mutants by targeted RNA recombination
    • Peng, D., C. A. Koetzner, and P. S. Masters. 1995. Analysis of second-site revenants of a murine coronavirus nucleocapsid protein deletion mutant and construction of nucleocapsid protein mutants by targeted RNA recombination. J. Virol. 69:3449-3457.
    • (1995) J. Virol. , vol.69 , pp. 3449-3457
    • Peng, D.1    Koetzner, C.A.2    Masters, P.S.3
  • 29
    • 0029117953 scopus 로고
    • Construction of murine coronavirus mutants containing interspecies chimeric nucleocapsid proteins
    • Peng, D., C. A. Koetzner, T. McMahon, Y. Zhu, and P. S. Masters. 1995. Construction of murine coronavirus mutants containing interspecies chimeric nucleocapsid proteins. J. Virol. 69:5475-5484.
    • (1995) J. Virol. , vol.69 , pp. 5475-5484
    • Peng, D.1    Koetzner, C.A.2    McMahon, T.3    Zhu, Y.4    Masters, P.S.5
  • 30
    • 0027930161 scopus 로고
    • Characterization of a replicating and packaged defective RNA of avian coronavirus infectious bronchitis virus
    • Penzes, Z., K. Tibbies, K. Shaw, P. Britton, T. D. K. Brown, and D. Cavanagh. 1994. Characterization of a replicating and packaged defective RNA of avian coronavirus infectious bronchitis virus. Virology 203:286-293.
    • (1994) Virology , vol.203 , pp. 286-293
    • Penzes, Z.1    Tibbies, K.2    Shaw, K.3    Britton, P.4    Brown, T.D.K.5    Cavanagh, D.6
  • 33
    • 0025236253 scopus 로고
    • Coronavirus transcription: Subgenomic mouse hepatitis virus replicative intermediates function in RNA synthesis
    • Sawicki, S. G., and D. L. Sawicki. 1990. Coronavirus transcription: subgenomic mouse hepatitis virus replicative intermediates function in RNA synthesis. J. Virol. 64:1050-1056.
    • (1990) J. Virol. , vol.64 , pp. 1050-1056
    • Sawicki, S.G.1    Sawicki, D.L.2
  • 34
    • 0025957570 scopus 로고
    • Minus-strand copies of replicating coronavirus mRNAs contain antileaders
    • Sethna, P. B., M. A. Hofmann, and D. A. Brian. 1991. Minus-strand copies of replicating coronavirus mRNAs contain antileaders. J. Virol. 65:320-325.
    • (1991) J. Virol. , vol.65 , pp. 320-325
    • Sethna, P.B.1    Hofmann, M.A.2    Brian, D.A.3
  • 35
    • 0037844609 scopus 로고
    • Coronavirus subgenomic minus-strand RNAs and the potential for mRNA replicons
    • Sethna, P. B., S.-L. Hung, and D. A. Brian. 1989. Coronavirus subgenomic minus-strand RNAs and the potential for mRNA replicons. Proc. Natl. Acad. Sci. USA 86:5626-5630.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 5626-5630
    • Sethna, P.B.1    Hung, S.-L.2    Brian, D.A.3
  • 36
    • 0029994685 scopus 로고    scopus 로고
    • Evidence for the existence of a pseudoknot structure at the 3′ terminus of the flavivirus genomic RNA
    • Shi, P.-Y., M. A. Brinton, J. M. Veal, Y. Y. Zhong, and W. D. Wilson. 1996. Evidence for the existence of a pseudoknot structure at the 3′ terminus of the flavivirus genomic RNA. Biochemistry 35:4222-4230.
    • (1996) Biochemistry , vol.35 , pp. 4222-4230
    • Shi, P.-Y.1    Brinton, M.A.2    Veal, J.M.3    Zhong, Y.Y.4    Wilson, W.D.5
  • 37
    • 0002000418 scopus 로고
    • The Coronaviridae: An introduction p
    • S. G. Siddell (ed.). Plenum Press, New York, N.Y.
    • Siddell, S. G. 1995. The Coronaviridae: an introduction p. 1-10. In S. G. Siddell (ed.), The Coronaviridae. Plenum Press, New York, N.Y.
    • (1995) The Coronaviridae , pp. 1-10
    • Siddell, S.G.1
  • 38
    • 0028050350 scopus 로고
    • Rapid evolution of a protein in vitro by DNA shuffling
    • Stemmer, W. P. C. 1994. Rapid evolution of a protein in vitro by DNA shuffling. Nature 370:389-391.
    • (1994) Nature , vol.370 , pp. 389-391
    • Stemmer, W.P.C.1
  • 39
    • 0028110130 scopus 로고
    • DNA shuffling by random fragmentation and reassembly: In vitro recombination for molecular evolution
    • Stemmer, W. P. C. 1994. DNA shuffling by random fragmentation and reassembly: in vitro recombination for molecular evolution. Proc. Natl. Acad. Sci. USA 91:10747-10751.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 10747-10751
    • Stemmer, W.P.C.1
  • 40
    • 0030004723 scopus 로고    scopus 로고
    • Structure-infectivity analysis of the human rhinovirus genomic RNA 3′ non-coding region
    • Todd, S., and B. L. Semler. 1996. Structure-infectivity analysis of the human rhinovirus genomic RNA 3′ non-coding region. Nucleic Acids Res. 24:2133-2142.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 2133-2142
    • Todd, S.1    Semler, B.L.2
  • 41
    • 0025939361 scopus 로고
    • A domain at the 3′ end of the polymerase gene is essential for encapsidation of coronavirus defective interfering RNAs
    • van der Most, R. G., P. J. Bredenbeek, and W. J. M. Spaan. 1991. A domain at the 3′ end of the polymerase gene is essential for encapsidation of coronavirus defective interfering RNAs. J. Virol. 65:3219-3226.
    • (1991) J. Virol. , vol.65 , pp. 3219-3226
    • Van der Most, R.G.1    Bredenbeek, P.J.2    Spaan, W.J.M.3
  • 42
    • 0029013594 scopus 로고
    • Translation but not the encoded sequence is essential for the efficient propagation of defective interfering RNAs of the coronavirus mouse hepatitis virus
    • van der Most, R. G., W. Luytjes, S. Rutjes, and W. J. M. Spaan. 1995. Translation but not the encoded sequence is essential for the efficient propagation of defective interfering RNAs of the coronavirus mouse hepatitis virus. J. Virol. 69:3744-3751.
    • (1995) J. Virol. , vol.69 , pp. 3744-3751
    • Van der Most, R.G.1    Luytjes, W.2    Rutjes, S.3    Spaan, W.J.M.4
  • 43
    • 0003149856 scopus 로고
    • Coronavirus replication, transcription, and RNA recombination
    • S. G. Siddell (ed.). Plenum Press, New York, N.Y.
    • van der Most, R. G., and W. J. M. Spaan. 1995. Coronavirus replication, transcription, and RNA recombination, p. 11-31. In S. G. Siddell (ed.), The Coronaviridae. Plenum Press, New York, N.Y.
    • (1995) The Coronaviridae , pp. 11-31
    • Van der Most, R.G.1    Spaan, W.J.M.2
  • 44
    • 0023449816 scopus 로고
    • TRNA-like structures tag the 3′ ends of genomic RNA molecules for replication: Implications for the origin of protein synthesis
    • Weiner, A. M., and N. Maizels. 1987. tRNA-like structures tag the 3′ ends of genomic RNA molecules for replication: implications for the origin of protein synthesis. Proc. Natl. Acad. Sci. USA 84:7383-7387.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 7383-7387
    • Weiner, A.M.1    Maizels, N.2
  • 45
    • 0028786186 scopus 로고
    • Evidence for a pseudoknot in the 3′ untranslated region of the bovine coronavirus genome: Corona and related viruses
    • Williams, G. D., R.-Y. Chang, and D. A. Brian. 1995. Evidence for a pseudoknot in the 3′ untranslated region of the bovine coronavirus genome: corona and related viruses. Adv. Exp. Med. Biol. 380:511-514.
    • (1995) Adv. Exp. Med. Biol. , vol.380 , pp. 511-514
    • Williams, G.D.1    Chang, R.-Y.2    Brian, D.A.3
  • 46
    • 0028965252 scopus 로고
    • Specific binding of host cellular proteins to multiple sites within the 3′ end of mouse hepatitis virus genomic RNA
    • Yu, W., and J. L. Leibowitz. 1995. Specific binding of host cellular proteins to multiple sites within the 3′ end of mouse hepatitis virus genomic RNA. J. Virol. 69:2016-2023.
    • (1995) J. Virol. , vol.69 , pp. 2016-2023
    • Yu, W.1    Leibowitz, J.L.2
  • 47
    • 0028875939 scopus 로고
    • A conserved motif at the 3′ end of mouse hepatitis virus genomic RNA required for host protein binding and viral RNA replication
    • Yu, W., and J. L. Leibowitz. 1995. A conserved motif at the 3′ end of mouse hepatitis virus genomic RNA required for host protein binding and viral RNA replication. Virology 214:128-138.
    • (1995) Virology , vol.214 , pp. 128-138
    • Yu, W.1    Leibowitz, J.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.