-
1
-
-
0034730417
-
Structure of a slow processing precursor penicillin acylase from Escherichia coli reveals the linker peptide blocking the activesite cleft
-
Hewitt, L., Kasche, V., Lummer, K., Lewis, R. J., Murshudov, G. N., Verma, C. S., Dodson, G. G. and Wilson, K. S. (2000) Structure of a slow processing precursor penicillin acylase from Escherichia coli reveals the linker peptide blocking the activesite cleft. J. Mol. Biol. 302, 887-898
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 887-898
-
-
Hewitt, L.1
Kasche, V.2
Lummer, K.3
Lewis, R.J.4
Murshudov, G.N.5
Verma, C.S.6
Dodson, G.G.7
Wilson, K.S.8
-
2
-
-
0035850792
-
Crystal structures of penicillin acylase enzyme-substrate complexes: Structural insights into the catalytic mechanism
-
McVey, C., Walsh, M. A., Dodson, G. G., Wilson, K. S. and Brannigan, J. A. (2001) Crystal structures of penicillin acylase enzyme-substrate complexes: structural insights into the catalytic mechanism. J. Mol. Biol. 313, 139-150
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 139-150
-
-
McVey, C.1
Walsh, M.A.2
Dodson, G.G.3
Wilson, K.S.4
Brannigan, J.A.5
-
3
-
-
0028857547
-
Penicillin acylase has a single-amino-acid catalytic centre
-
Duggleby, H. J., Tolley, S. P., Hill, C. P., Dodson, E. J., Dodson, G. and Moody, P. C. E. (1995) Penicillin acylase has a single-amino-acid catalytic centre. Nature (London) 373, 264-268
-
(1995)
Nature (London)
, vol.373
, pp. 264-268
-
-
Duggleby, H.J.1
Tolley, S.P.2
Hill, C.P.3
Dodson, E.J.4
Dodson, G.5
Moody, P.C.E.6
-
4
-
-
0032573516
-
Ligandinduced conformational change in penicillin acylase
-
Done, S. H., Brannigan, J. A., Moody, P. C. E. and Hubbard, R. E. (1998) Ligandinduced conformational change in penicillin acylase. J. Mol. Biol. 284, 463-475
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 463-475
-
-
Done, S.H.1
Brannigan, J.A.2
Moody, P.C.E.3
Hubbard, R.E.4
-
5
-
-
0028972449
-
A new catalytic framework acting through an N-terminal nucleophile and capable of autocatalytic processing
-
Brannigan, J. A., Dodson, G., Duggleby, H. J., Moody, P. C. E., Smith, J. L., Tomchick, D. R. and Murzin, A. G. (1995) A new catalytic framework acting through an N-terminal nucleophile and capable of autocatalytic processing. Nature (London) 378, 416-419
-
(1995)
Nature (London)
, vol.378
, pp. 416-419
-
-
Brannigan, J.A.1
Dodson, G.2
Duggleby, H.J.3
Moody, P.C.E.4
Smith, J.L.5
Tomchick, D.R.6
Murzin, A.G.7
-
6
-
-
0025790912
-
Site-directed chemical conversion of serine to cysteine in penicillin acylase from Escherichia coli ATCC 11105: Effect on conformation and catalytic activity
-
Slade, A., Horrocks, A. J., Lindsay, C. D., Dunbar, B. and Virden, R. (1991) Site-directed chemical conversion of serine to cysteine in penicillin acylase from Escherichia coli ATCC 11105: effect on conformation and catalytic activity. Eur. J. Biochem. 197, 75-80
-
(1991)
Eur. J. Biochem.
, vol.197
, pp. 75-80
-
-
Slade, A.1
Horrocks, A.J.2
Lindsay, C.D.3
Dunbar, B.4
Virden, R.5
-
7
-
-
0026334245
-
Chemical modification of serine at the active site of penicillin acylase from Kluyvera citrophila
-
Martin, J., Slade, A., Aitken, A., Arche, R. and Virden, R. (1991) Chemical modification of serine at the active site of penicillin acylase from Kluyvera citrophila. Biochem. J. 280, 659-662
-
(1991)
Biochem. J.
, vol.280
, pp. 659-662
-
-
Martín, J.1
Slade, A.2
Aitken, A.3
Arche, R.4
Virden, R.5
-
9
-
-
0030014982
-
Rapid burst kinetics in the hydrolysis of 4-nitrophenyl acetate by penicillin G acylase from Kluyvera citrophila
-
Roa, A., Goble, M. L., Garcia, J. L., Acebal, C. and Virden, R. (1996) Rapid burst kinetics in the hydrolysis of 4-nitrophenyl acetate by penicillin G acylase from Kluyvera citrophila. Biochem. J. 316, 409-412
-
(1996)
Biochem. J.
, vol.316
, pp. 409-412
-
-
Roa, A.1
Goble, M.L.2
Garcia, J.L.3
Acebal, C.4
Virden, R.5
-
10
-
-
0034462589
-
Characterization of the β-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies
-
Alkema, W. B. L., Hensgens, C. M. H., Kroezinga, E. H., de Vries, E., Floris, R., van der Laan, J. M., Dijkstra, B. W. and Janssen, D. B (2000) Characterization of the β-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies. Protein Eng. 13, 857-863
-
(2000)
Protein Eng.
, vol.13
, pp. 857-863
-
-
Alkema, W.B.L.1
Hensgens, C.M.H.2
Kroezinga, E.H.3
De Vries, E.4
Floris, R.5
Van Der Laan, J.M.6
Dijkstra, B.W.7
Janssen, D.B.8
-
11
-
-
0035813878
-
Directed evolution and biocatalysis
-
Powell, K. A., Ramer, S. W., delCardayre, S. B., Stemmer, W. P. C., Tobin, M. B., Longchamp, P. F. and Huisman, G. W. (2001) Directed evolution and biocatalysis. Angew. Chem. 40, 3948-3959
-
(2001)
Angew. Chem.
, vol.40
, pp. 3948-3959
-
-
Powell, K.A.1
Ramer, S.W.2
DelCardayre, S.B.3
Stemmer, W.P.C.4
Tobin, M.B.5
Longchamp, P.F.6
Huisman, G.W.7
-
12
-
-
0022362447
-
Experimental evolution of penicillin G acylases from Escherichia coli and Proteus rettgeri
-
Daumy, G. O., Danley, D., McColl, A., Apostolakos, D. and Vinick, F. J. (1985) Experimental evolution of penicillin G acylases from Escherichia coli and Proteus rettgeri. J. Bacteriol. 163, 925-932
-
(1985)
J. Bacteriol.
, vol.163
, pp. 925-932
-
-
Daumy, G.O.1
Danley, D.2
McColl, A.3
Apostolakos, D.4
Vinick, F.J.5
-
13
-
-
0022592256
-
An improved method to clone penicillin acylase genes: Cloning and expression in Escherichia coli of penicillin G acylase from Kluyvera citrophila
-
Garcia, J. L. and Buesa, J. M. (1986) An improved method to clone penicillin acylase genes: cloning and expression in Escherichia coli of penicillin G acylase from Kluyvera citrophila. J. Biotechnol. 3, 187-195
-
(1986)
J. Biotechnol.
, vol.3
, pp. 187-195
-
-
Garcia, J.L.1
Buesa, J.M.2
-
14
-
-
0024440475
-
Selection of amidases with novel substrate specilicities from penicillin amidase of Escherichia coli
-
Forney, L. J., Wong, D. C. L. and Ferber, D. M. (1989) Selection of amidases with novel substrate specilicities from penicillin amidase of Escherichia coli. Appl. Environ. Microbiol. 55, 2550-2555
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 2550-2555
-
-
Forney, L.J.1
Wong, D.C.L.2
Ferber, D.M.3
-
15
-
-
0002544329
-
Altered specificity mutants of penicillin acylase
-
Geisow, M. and Epton, R., eds. Mayflower Worldwide, Kingswinford
-
Brannigan, J., Ladurner, A., McVey, C. and Forney, L. (1995) Altered specificity mutants of penicillin acylase. In Perspectives on Protein Engineering (Geisow, M. and Epton, R., eds.), pp. 124-126, Mayflower Worldwide, Kingswinford
-
(1995)
Perspectives on Protein Engineering
, pp. 124-126
-
-
Brannigan, J.1
Ladurner, A.2
McVey, C.3
Forney, L.4
-
16
-
-
0021312893
-
Amino acid analysis by reverse-phase high-performance liquid chromatography: Precolumn derivatization with phenylisothiocyanate
-
Heinrikson, R. L. and Meredith, S. C. (1984) Amino acid analysis by reverse-phase high-performance liquid chromatography: precolumn derivatization with phenylisothiocyanate. Anal. Biochem. 136, 65-74
-
(1984)
Anal. Biochem.
, vol.136
, pp. 65-74
-
-
Heinrikson, R.L.1
Meredith, S.C.2
-
17
-
-
0023697408
-
Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants
-
Santoro, M. M. and Bolen, D. W. (1988) Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants. Biochemistry 27, 8063-8068
-
(1988)
Biochemistry
, vol.27
, pp. 8063-8068
-
-
Santoro, M.M.1
Bolen, D.W.2
-
18
-
-
0023044277
-
Progress curves of reactions catalyzed by unstable enzymes. A theoretical approach
-
Duggleby, R. N. (1986) Progress curves of reactions catalyzed by unstable enzymes. A theoretical approach. J. Theor. Biol. 123, 67-80
-
(1986)
J. Theor. Biol.
, vol.123
, pp. 67-80
-
-
Duggleby, R.N.1
-
19
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-325
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-325
-
-
Otwinowski, Z.1
Minor, W.2
-
20
-
-
0028103275
-
The CCP4 Suite: Programs for protein crystallography
-
Collaborative Computational Proiect, no. 4 (1994) The CCP4 Suite: programs for protein crystallography. Acta Crystallogr. D 50, 760-763
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
21
-
-
84920325457
-
AMoRe: An automated package for molecular replacement
-
Navaza, J. (1994) AMoRe: an automated package for molecular replacement. Acta Crystallogr. A 50, 157-163
-
(1994)
Acta Crystallogr. A
, vol.50
, pp. 157-163
-
-
Navaza, J.1
-
22
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A. and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D 53, 240-255
-
(1997)
Acta Crystallogr. D
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
23
-
-
0000127585
-
Automated refinement of protein models
-
Lamzin, V. S. and Wilson, K. S. (1993) Automated refinement of protein models. Acta Crystallogr. D 49, 129-147
-
(1993)
Acta Crystallogr. D
, vol.49
, pp. 129-147
-
-
Lamzin, V.S.1
Wilson, K.S.2
-
24
-
-
0026597444
-
Free R value: A novel statistical quantity for assessing the accuracy of crystal structures
-
Brünger, A. T. (1992) Free R value: A novel statistical quantity for assessing the accuracy of crystal structures. Nature (London) 355, 472-475
-
(1992)
Nature (London)
, vol.355
, pp. 472-475
-
-
Brünger, A.T.1
-
25
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
Guex, N. and Peitsch, M. C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18, 2714-2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
26
-
-
0023481348
-
Complete nucleotide sequence of the penicillin G acylase gene and the flanking regions, and its expression in Escherichia coli
-
Oh, S.-J., Kim, Y.-C., Park, Y.-W., Min, S.-Y., Kim, I.-S. and Kang, H.-S. (1987) Complete nucleotide sequence of the penicillin G acylase gene and the flanking regions, and its expression in Escherichia coli. Gene 56, 87-97
-
(1987)
Gene
, vol.56
, pp. 87-97
-
-
Oh, S.-J.1
Kim, Y.-C.2
Park, Y.-W.3
Min, S.-Y.4
Kim, I.-S.5
Kang, H.-S.6
-
27
-
-
0023056887
-
Penicillin acylase from E. coli: Unique gene-protein relation
-
Schumacher, G., Sizmann, D., Haug, H., Buckel, P. and Böck, A. (1986) Penicillin acylase from E. coli: unique gene-protein relation. Nucleic Acids Res. 14, 5713-5727
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 5713-5727
-
-
Schumacher, G.1
Sizmann, D.2
Haug, H.3
Buckel, P.4
Böck, A.5
-
28
-
-
0024425139
-
Alteration of the catalytic efficiency of penicillin amidase from Escherichia coli
-
Forney, L. J. and Wong, D. C. L (1989) Alteration of the catalytic efficiency of penicillin amidase from Escherichia coli. Appl. Environ. Microbiol. 55, 2556-2560
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 2556-2560
-
-
Forney, L.J.1
Wong, D.C.L.2
-
29
-
-
0028172065
-
Changing the substrate specificity of penicillin G acylase from Kluyvera citrophila through selective pressure
-
Roa, A., Garcia, J. L., Salto, F. and Cortes, E. (1994) Changing the substrate specificity of penicillin G acylase from Kluyvera citrophila through selective pressure. Biochem. J. 303, 869-875
-
(1994)
Biochem. J.
, vol.303
, pp. 869-875
-
-
Roa, A.1
Garcia, J.L.2
Salto, F.3
Cortes, E.4
-
30
-
-
0029091933
-
Improvement of the catalytic properties of penicillin G acylase from Eschenchia coli ATCC 11105 by selection of a new substrate specificity
-
Niersbach, H., Kuhne, A., Tischer, W., Weber, M., Wedekind, F. and Plapp, R. (1995) Improvement of the catalytic properties of penicillin G acylase from Eschenchia coli ATCC 11105 by selection of a new substrate specificity. Appl. Microbiol. Biotechnol. 43, 679-684
-
(1995)
Appl. Microbiol. Biotechnol.
, vol.43
, pp. 679-684
-
-
Niersbach, H.1
Kuhne, A.2
Tischer, W.3
Weber, M.4
Wedekind, F.5
Plapp, R.6
-
31
-
-
0028923978
-
Isolation and mapping of a mutant penicillin G acylase with altered substrate specificity from Escherichia coli
-
Niersbach, H., Tischer, W., Weber, M., Wedekind, F. and Plapp, R. (1995) Isolation and mapping of a mutant penicillin G acylase with altered substrate specificity from Escherichia coli. Biotechnol. Lett. 17, 19-24
-
(1995)
Biotechnol. Lett.
, vol.17
, pp. 19-24
-
-
Niersbach, H.1
Tischer, W.2
Weber, M.3
Wedekind, F.4
Plapp, R.5
-
32
-
-
0033593453
-
Redesigning the substrate specificity of an enzyme by cumulative effects of the mutations of non-active site residues
-
Oue, S., Okamoto, A., Yano, T. and Kagamiyama, H. (1999) Redesigning the substrate specificity of an enzyme by cumulative effects of the mutations of non-active site residues. J. Biol. Chem. 274, 2344-2349
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 2344-2349
-
-
Oue, S.1
Okamoto, A.2
Yano, T.3
Kagamiyama, H.4
-
33
-
-
0025180221
-
The folding and solution conformation of penicillin G acylase
-
Lindsay, C. D. and Pain, R. H. (1990) The folding and solution conformation of penicillin G acylase. Eur. J. Biochem. 192, 133-141
-
(1990)
Eur. J. Biochem.
, vol.192
, pp. 133-141
-
-
Lindsay, C.D.1
Pain, R.H.2
-
34
-
-
0034615775
-
Directed evolution study of temperature adaptation in a psychrophilic enzyme
-
Miyazaki, K., Wintrode, P. L., Grayling, R. A., Rubingh, D. N. and Arnold, F. H. (2000) Directed evolution study of temperature adaptation in a psychrophilic enzyme. J. Mol. Biol. 297, 1015-1026
-
(2000)
J. Mol. Biol.
, vol.297
, pp. 1015-1026
-
-
Miyazaki, K.1
Wintrode, P.L.2
Grayling, R.A.3
Rubingh, D.N.4
Arnold, F.H.5
-
35
-
-
0031901853
-
Mutation of cis-proline 207 in mitochondrial creatine kinase to alanine leads to increased acid stability
-
Forstner, M., Muller, A., Rognan, D., Kriechbaum, M. and Wallimann, T. (1998) Mutation of cis-proline 207 in mitochondrial creatine kinase to alanine leads to increased acid stability. Protein Eng. 11, 563-568
-
(1998)
Protein Eng.
, vol.11
, pp. 563-568
-
-
Forstner, M.1
Muller, A.2
Rognan, D.3
Kriechbaum, M.4
Wallimann, T.5
-
36
-
-
0030480257
-
An engineered penicillin acylase with altered surface charge is more stable in alkaline pH
-
Del Río, G., Lopez-Munguía, A. and Soberon, X. (1996) An engineered penicillin acylase with altered surface charge is more stable in alkaline pH. Ann. N.Y. Acad. Sci 799, 61-64
-
(1996)
Ann. N.Y. Acad. Sci.
, vol.799
, pp. 61-64
-
-
Del Río, G.1
Lopez-Munguía, A.2
Soberon, X.3
-
37
-
-
0029380383
-
Mutant Escherichia coli penicillin acytase with enhanced stability at alkaline pH
-
Del Río, G., Rodríguez, M., Munguía, M., Lopez-Munguía, A. and Soberon, X. (1995) Mutant Escherichia coli penicillin acytase with enhanced stability at alkaline pH. Biotechnol. Bioeng. 48, 141-148
-
(1995)
Biotechnol. Bioeng.
, vol.48
, pp. 141-148
-
-
Del Río, G.1
Rodríguez, M.2
Munguía, M.3
Lopez-Munguía, A.4
Soberon, X.5
-
38
-
-
0025141842
-
Thermodynamic profiles of penicillin G hydrolysis catalysed by wild-type and Met → Ala168 mutant penicillin acylases from Kluyvera citrophila
-
Martín, J., Prieto, I., Barbero, J. L., Pérez-Gil, J., Mancheño, J. M. and Arche, R. (1990) Thermodynamic profiles of penicillin G hydrolysis catalysed by wild-type and Met → Ala168 mutant penicillin acylases from Kluyvera citrophila. Biochim. Biophys. Acta 1037, 133-139
-
(1990)
Biochim. Biophys. Acta
, vol.1037
, pp. 133-139
-
-
Martín, J.1
Prieto, I.2
Barbero, J.L.3
Pérez-Gil, J.4
Mancheño, J.M.5
Arche, R.6
-
39
-
-
0032546782
-
π-Stacking interactions.
-
McGaughey, G. B., Gagne, M. and Rappe, A. K. (1998) π-Stacking interactions.J. Biol. Chem. 273, 15458-15463
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 15458-15463
-
-
McGaughey, G.B.1
Gagne, M.2
Rappe, A.K.3
-
40
-
-
0032884396
-
Crystal structure of penicillin G acylase from the Bro1 mutant strain of Providencia rettgeri
-
McDonough, M. A., Klei, H. E. and Kelly, J. A. (1999) Crystal structure of penicillin G acylase from the Bro1 mutant strain of Providencia rettgeri. Protein Sci. 8, 1971-1981
-
(1999)
Protein Sci.
, vol.8
, pp. 1971-1981
-
-
McDonough, M.A.1
Klei, H.E.2
Kelly, J.A.3
-
41
-
-
0035873330
-
Role of hydrogen bonding in the interaction between a xylan binding module and xylan
-
Xie, H., Bolam, D. N., Nagy, T, Szabó, L., Cooper, A., Simpson, P. J., Lakey, J. H., Williamson, M. P. and Gilbert, H. J. (2001) Role of hydrogen bonding in the interaction between a xylan binding module and xylan. Biochemistry 40, 5700-5707
-
(2001)
Biochemistry
, vol.40
, pp. 5700-5707
-
-
Xie, H.1
Bolam, D.N.2
Nagy, T.3
Szabó, L.4
Cooper, A.5
Simpson, P.J.6
Lakey, J.H.7
Williamson, M.P.8
Gilbert, H.J.9
-
42
-
-
0035471137
-
Generation of new enzymes via covalent modification of existing proteins
-
Qi, D. F., Tann, C. M., Haring, D. and Distefano, M. D. (2001) Generation of new enzymes via covalent modification of existing proteins. Chem. Rev. 101, 3081-3111
-
(2001)
Chem. Rev.
, vol.101
, pp. 3081-3111
-
-
Qi, D.F.1
Tann, C.M.2
Haring, D.3
Distefano, M.D.4
|