Solution structure of the N-terminal EGF-like domain from human factor VII

Biochemistry

Volumn 37, Issue 30, 1998, Pages 10605-10615

  Muranyi, Andreas ^a   Finn, Bryan E ^a   Gippert, Carry P ^a   Forsén, Sture ^a   Stenflo, Johan ^a   Drakenberg, Torbjörn ^a  

^a LUND UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

BLOOD CLOTTING FACTOR 7; EPIDERMAL GROWTH FACTOR;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; BINDING AFFINITY; BINDING SITE; BLOOD CLOTTING; CALCIUM BINDING; CONFORMATIONAL TRANSITION; HUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMALS; ASPARAGINE; ASPARTIC ACID; CATTLE; CRYSTALLOGRAPHY, X-RAY; EPIDERMAL GROWTH FACTOR; FACTOR VII; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PROTEIN STRUCTURE, TERTIARY; SEQUENCE HOMOLOGY, AMINO ACID; SOLUTIONS;

EID: 0032575298     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi980522f     Document Type: Article

References (76)

1. Brooze, G. J., and Majerus, P. W. (1980) J. Biol. Chem. 255, 1242-1247.
2. Bajaj, S. P., Rapaport, S. I., and Brown, S. F. (1981) J. Biol. Chem. 256, 253-259.
3. Petersen, L. C., Valentin, S., and Hedner, U. (1995) Thromb. Res. 79, 1-47.
4. Fair, D. S. (1983) Blood 62, 784-791.
5. Wildgoose, P., Nemerson, Y., Hansen, L. L., Nielsen, F. E., Glazer, S., and Hedner, U. (1992) Blood 80, 25-28.
6. Morrisey, J. H., Macik, B. G., Neuenschwander, P. F., and Comp, P. C. (1993) Blood 81, 734-744.
7. Howard, P. R., Bovil, E. G., Pike, J., Church, W. R., and Tracy, R. P. (1994) Thromb. Haemost. 72, 21-27.
8. Nemerson, Y. (1988) Blood 71, 1-8.
9. Camerer, E., Kolstø, A.-B., and Prydz, H. (1996) Thromb. Res. 81, 1-41.
10. Harlos, K., Martin, D. M. A., O'Brien, D. P., Jones, E. Y., Stuart, D. I., Polikarpov, I., Miller, A., Tuddenham, E. G. D., and Boys, C. W. G. (1994) Nature 370, 662-666.
11. Muller, Y. A., Ultsch, M. H., Kelly, R. F., and DeVos, A. M. (1994) Biochemistry 33, 10864-10870.
12. Hagen, F. S., Gray, C. L., O'Hara, P., Grant, F. J., Sarri, G. C., Woodbury, R. G., Hart, C. E., Insley, M., Kisiel, W., Kurachi, K., and Davie, E. W. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 2412-2416.
13. Bauer, K. A. (1997) Thromb. Haemost. 78, 108-111.
14. Davie, E. W., Fujikawa, K., and Kisiel, W. (1991) Biochemistry 30, 10363-10370.
15. Rapaport, S. I., and Rao, L. V. M. (1995) Thromb. Haemost. 74, 7-17.
16. Martin, D. M. A., Boys, C. W. G., and Ruf, W. (1995) FASEB J. 9, 852-859.
17. Banner, D. W., D'Arcy, A., Chène, C., Winkler, F. K., Guha, A., Konigsberg, W. H., Nemerson, Y., and Kirchhofer, D. (1996) Nature 380, 41-46.
18. Dickinson, C. D., Kelly, C. R., and Ruf, W. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 14379-14384.
19. Kelly, C. R., Dickinson, C. D., and Ruf, W. (1997) J. Biol. Chem. 272, 17467-17472,
20. Banner, D. W. (1997) Thromb. Haemost. 78, 512-515.
21. Kirchhofer, D., and Banner, D. W. (1997) Trends Cardiovasc. Med. 7, 316-324.
22. Sabharwal, A. K., Birktoft, J. J., Gorka, J., Wildgoose, P., Petersen, L. C., and Bajaj, S. P. (1995) J. Biol. Chem. 15523-15530.
23. Schiødt, J., Harrit, N., Christensen, U., and Petersen, L. C. (1992) FEBS Lett. 306, 265-268.
24. Wildgoose, P., Foster, D., Schiødt, J., Wiberg, F. C., Birktoft, J. J., and Petersen, L. C. (1993) Biochemistry 32, 114-119.
25. Persson, E., Olsen, O. H., Østergaard, A., and Nielsen, L. S. (1997) J. Biol. Chem. 272, 19919-19924.
26. Banner, D. W. (1997) XVIth Congress of the International Society on Thrombosis and Haemostasis
27. Sunnerhagen, M., Olah, G. A., Stenflo, J., Forsén, S., Drakenberg, T., and Trewhella, J. (1996) Biochemistry 35, 11547-11559.
28. Bjoern, S., Foster, D. C., Thim, L., Wiberg, F. C., Christensen, M., Komiyama, Y., Pedersen, A. H., and Kisiel, W. (1991) J. Biol. Chem. 266, 11051-11057.
29. Thim, L., Bjoern, S., Christensen, M., Nicolaisen, E. M., Lund-Hansen, T., Pedersen, A. H., and Hedner, U. (1988) Biochemistry 27, 7785-7793.
30. Campbell, I. D., and Bork, P. (1993) Curr. Opin. Struct. Biol. 385-392.
31. Appella, E., Weber, I., and Blasi, F. (1988) FEBS Lett. 231, 1-4.
32. Engel, J. (1989) FEBS Lett. 251, 1-7.
33. Henikoff, S., Greene, E. A., Pietrokovski, S., Bork, P., Attwood, T. K., and Hood, L. (1997) Science 278, 609-614.
34. Baron, M., Norman, D. G., Harvey, T. S., Handford, P. S., Mayhew, M., Tse, A. G. D., Brownlee, G. G., and Campbell, I. D. (1992) Protein Sci. 81-90.
35. Aue, W. P., Bartholdi, E., and Ernst, R. R. (1976) J. Chem. Phys. 64, 2229-2246.
36. Braunschweiler, L., Bodenhausen, G., and Ernst, R. R. (1983) Mol. Phys. 48, 535-560.
37. Braunschweiler, L., and Ernst, R. R. (1983) J. Magn. Reson. 53, 521-528.
38. Macura, S., and Ernst, R. R. (1980) Mol. Phys. 41, 95-117.
39. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids, John Wiley & Sons, Inc., New York.
40. Chazin, W. J., Rance, M., and Wright, P. E. (1988) J.. Mol. Biol. 202, 603-622.
41. Chazin, W. J., Rance, M., and Wright, P. E. (1988) J. Mol. Biol. 202, 623-636.
42. Konig, T. M. G., Boelens, R., and Kaptein, R. (1990) J. Magn. Reson. 90, 111-123.
43. Tropp, J. (1980) J. Chem. Phys. 72, 6035-6043.
44. Nilges, M. (1993) Proteins: Struct., Funct., Genet. 17, 295-309.
45. Pardi, A., Billeter, M., and Wüthrich. (1984) J. Mol. Biol. 180, 741-751.
46. Brünger, A. T. (1992) X-PLOR version 3.1, Yale University, New Haven, CT.
47. Nilges, M., Clore, M., and Gronenborn, A. M. (1988) FEBS Lett. 229, 317-324.
48. Gippert, G. P. (1995) Ph.D. Thesis, The Scripps Research Institute, La Jolla, CA.
49. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
50. Gippert, G. P., and Akke, M. (manuscript in preparation).
51. Chou, P. Y., and Fasman, G. D. (1977) J. Mol. Biol. 115, 135-175.
52. Richardson, J. S. (1981) Adv. Protein Chem. 34, 167-339.
53. Bersch, B., Hernandez, J.-F., Marion, D., and Arlaud, G. J. (1998) Biochemistry 37, 1204-1214.
54. Selander-Sunnerhagen, M., Ullner, M., Persson, E., Teleman, O., Stenflo, J., and Drakenberg, T. (1992) J. Biol. Chem. 267, 19642-19649.
55. Rao, Z., Handford, P., Mayhew, M., Knott, V., Brownlee, G. G., and Stuart, D. (1995) Cell 82, 131-141.
56. Nishikawa, K., Ooi, T., Isogai, Y., and Saito, N. (1972) J. Phys. Soc. Jpn. 32, 1331-1337.
57. Akke, M., Forsén, S., and Chazin, W. J. (1995) J. Mol Biol. 252, 102-121.
58. O'Brien, D. P., Kemball-Cook, G., Hutchinson, A. M., Martin, D. M. A., Johnson, D. J. D., Byfield, P. G. H., Takamiya, O., Tuddenham, E. G. D., and McVey, J. H. (1994) Biochemistry 33, 14162-14169.
59. Brandstetter, H., Bauer, M., Huber, R., Lollar, P., and Bode, W. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9796-9800.
60. Leonard, B. J. N., Chen, Q., Blajchman, M. A., Ofosu, F. A., Sridhara, S., Yang, D., and Clarke, B. J. (1998) Blood 91, 142-148.
61. Taylor, R., and Kennard, O. (1984) Acc. Chem. Res. 17, 320-326.
62. Merutka, G., Dyson, H. J., and Wright, P. E. (1995) J. Biomol. NMR 5, 14-24.
63. Huang, L. H., Cheng, H., Pardi, A., Tam, J. P., and Sweeney, W. V. (1991) Biochemistry 30, 7402-7409.
64. Selander, M., Persson, E., Stenflo, J., and Drakenberg, T. (1990) Biochemistry 29, 8111-8118.
65. Freedman, S. J., Sanford, D. G., Bachovchin, W. W., Furie, B. C., Baleja, J. D., and Furie, B. (1996) Biochemistry 35, 13733-13744.
66. Tappin, M. J., Cooke, R. M., Fitton, J. E., and Campbell, I. D. (1989) Eur. J. Biochem. 179, 629-637.
67. Hommel, U., Harvey, T. S., Driscoll, P. C., and Campbell, I. D. (1992) J. Mol. Biol. 277, 271-282.
68. Hansen, A. P., Petros, A. M., Meadows, R. P., Nettesheim, D. G., Mazar, A. P., Olejniczak, E. T., Xu, R. X., Pederson, T. M., Henkin, J., and Fesik, S. W. (1994) Biochemistry 33, 4847-4864.
69. Smith, B. O., Downing, A. K., Dudgeon, T. J., Cunningham, M., Driscoll, P. C., and Campbell, I. D. (1994) Biochemistry 33, 2422-2429.
70. Graves, B. J., Crowther, R. L., Chandran, C., Rumberger, J. M., Li, S., Huang, K.-S., Presky, D. H., Familletti, P., Wolitzky, B. A., and Burns, D. K. (1994) Nature 367, 532-538.
71. Ullner, M., Selander, M., Persson, E., Stenflo, J., Drakenberg, T., and Teleman, O. (1992) Biochemistry 31, 5974-5983.
72. Harvey, T. S., Wilkinson, A. J., Tappin, M. J., Cooke, R. M., and Campbell, I. D. (1991) Eur. J. Biochem. 198, 555-562.
73. Smith, B. O., Downing, A. K., Driscoll, P. C., Dudgeon, T. J., and Campbell, I. D. (1995) Structure 3, 823-833.
74. Padmanabhan, K., Padmanabhan, K. P., Tulinsky, A., Park, C. H., Bode, W., Huber, R., Blankenship, D. T., Cardin, A. D., and Kisiel, W. (1993) J. Mol. Biol. 232, 947-966.
75. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
76. Koradi, R., Billeter, M., and Wüthrich, K. (1996) J. Mol. Graphics 14, 51-55.