-
1
-
-
0000640710
-
Modulation of chemical composition and other parameters of the cell by growth rate
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Bremer, H. and Dennis, P.P. (1996) Modulation of chemical composition and other parameters of the cell by growth rate. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1553-1569. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1553-1569
-
-
Bremer, H.1
Dennis, P.P.2
-
2
-
-
0028875725
-
Three-dimensional structure of E. coli core RNA polymerase: Promoter binding and elongation conformations of the enzyme
-
Polyakov, A., Severinova, E. and Darst, S.A. (1995) Three-dimensional structure of E. coli core RNA polymerase: promoter binding and elongation conformations of the enzyme. Cell 83, 365-373.
-
(1995)
Cell
, vol.83
, pp. 365-373
-
-
Polyakov, A.1
Severinova, E.2
Darst, S.A.3
-
3
-
-
0014669901
-
Cyclic re-use of the RNA polymerase sigma factor
-
Travers, A.A. and Burgess, R.R. (1969) Cyclic re-use of the RNA polymerase sigma factor. Nature 222, 537-540.
-
(1969)
Nature
, vol.222
, pp. 537-540
-
-
Travers, A.A.1
Burgess, R.R.2
-
4
-
-
0014663102
-
Factor stimulating transcription by RNA polymerase
-
Burgess, R.R., Travers, A.A., Dunn, J.J. and Bautz, E.K. (1969) Factor stimulating transcription by RNA polymerase. Nature 221, 43-46.
-
(1969)
Nature
, vol.221
, pp. 43-46
-
-
Burgess, R.R.1
Travers, A.A.2
Dunn, J.J.3
Bautz, E.K.4
-
5
-
-
0029838635
-
Promoters and basal transcription machinery in eubacteria and eukaryotes: Concepts, definitions, and analogies
-
Fassler, J.S. and Gussin, G.N. (1996) Promoters and basal transcription machinery in eubacteria and eukaryotes: concepts, definitions, and analogies. Methods Enzymol. 273, 3-29.
-
(1996)
Methods Enzymol.
, vol.273
, pp. 3-29
-
-
Fassler, J.S.1
Gussin, G.N.2
-
6
-
-
0000776061
-
Bacterial sigma factors
-
Yamamoto, K.R. and Mcknight, S.L., Eds., Cold Spring Harbor Laboratory press, Cold Spring Harbor, NY
-
Gross, C.A., Lonetto, M. and Losick, R. (1992) Bacterial sigma factors. In: Transcriptional Regulation (Yamamoto, K.R. and Mcknight, S.L., Eds.), pp. 129-176. Cold Spring Harbor Laboratory press, Cold Spring Harbor, NY.
-
(1992)
Transcriptional Regulation
, pp. 129-176
-
-
Gross, C.A.1
Lonetto, M.2
Losick, R.3
-
7
-
-
0001416657
-
70), promoters, and the kinetics of the steps of transcription initiation
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
70), promoters, and the kinetics of the steps of transcription initiation. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 792-820. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 792-820
-
-
Record, M.D.1
Reznikoff, W.S.2
Craig, M.L.3
McQuade, K.4
Schlax, P.J.5
-
8
-
-
0023650609
-
Analysis of E. coli promoter sequences
-
Harley, C.B. and Reynolds, R.P. (1987) Analysis of E. coli promoter sequences. Nucleic Acids Res. 15, 2343-2361.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 2343-2361
-
-
Harley, C.B.1
Reynolds, R.P.2
-
9
-
-
0026729012
-
54 to promoter DNA
-
54 to promoter DNA. Nature 358, 422-424.
-
(1992)
Nature
, vol.358
, pp. 422-424
-
-
Buck, M.1
Cannon, W.2
-
10
-
-
0028977969
-
D: Overproduction, domain analysis and DNA-binding properties
-
D: overproduction, domain analysis and DNA-binding properties. J. Mol. Biol. 249, 743-753.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 743-753
-
-
Chen, Y.F.1
Helmann, J.D.2
-
11
-
-
0024798157
-
32 with heat shock promoters. DNase I footprinting and methylation protection
-
32 with heat shock promoters. DNase I footprinting and methylation protection. J. Mol. Biol. 210, 513-520.
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 513-520
-
-
Cowing, D.W.1
Gross, C.A.2
-
13
-
-
0024355282
-
A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity
-
Gardella, T., Moyle, H. and Susskind, M.M. (1989) A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity. J. Mol. Biol. 206, 579-590.
-
(1989)
J. Mol. Biol.
, vol.206
, pp. 579-590
-
-
Gardella, T.1
Moyle, H.2
Susskind, M.M.3
-
15
-
-
0031046662
-
DNA-binding determinants of sigma 54 as deduced from libraries of mutations
-
Guo, Y. and Gralla, J.D. (1997) DNA-binding determinants of sigma 54 as deduced from libraries of mutations. J. Bacteriol. 179, 1239-1245.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1239-1245
-
-
Guo, Y.1
Gralla, J.D.2
-
16
-
-
0023496357
-
The nucleotide sequence of the sigma factor gene ntrA (rpoN) of Azotobacter vinelandii: Analysis of conserved sequences in NtrA proteins
-
Merrick, M., Gibbins, J. and Toukdarian, A. (1987) The nucleotide sequence of the sigma factor gene ntrA (rpoN) of Azotobacter vinelandii: analysis of conserved sequences in NtrA proteins. Mol. Gen. Genet. 210, 323-330.
-
(1987)
Mol. Gen. Genet.
, vol.210
, pp. 323-330
-
-
Merrick, M.1
Gibbins, J.2
Toukdarian, A.3
-
18
-
-
0026612797
-
70 family: Sequence conservation and evolutionary relationships
-
70 family: sequence conservation and evolutionary relationships. J. Bacteriol. 174, 3843-3839.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 3839-3843
-
-
Lonetto, M.1
Gribskov, M.2
Gross, C.A.3
-
20
-
-
0023918675
-
Structure and function of bacterial sigma factors
-
Helmann, J.D. and Chamberlin, M.J. (1988) Structure and function of bacterial sigma factors. Annu. Rev. Biochem. 57, 839-872.
-
(1988)
Annu. Rev. Biochem.
, vol.57
, pp. 839-872
-
-
Helmann, J.D.1
Chamberlin, M.J.2
-
21
-
-
0031581917
-
70 is required for efficient isomerization and initiation of transcription by Escherichia coli RNA polymerase
-
70 is required for efficient isomerization and initiation of transcription by Escherichia coli RNA polymerase. J. Mol. Biol. 267, 60-74.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 60-74
-
-
Wilson, C.1
Dombroski, A.J.2
-
23
-
-
0024391829
-
Mutation changing the specificity of an RNA polymerase sigma factor
-
Zuber, P., Healy, J., Carter, H.L., Cutting, S., Moran, Jr., C.P. and Losick, R. (1989) Mutation changing the specificity of an RNA polymerase sigma factor. J. Mol. Biol. 206, 605-614.
-
(1989)
J. Mol. Biol.
, vol.206
, pp. 605-614
-
-
Zuber, P.1
Healy, J.2
Carter, H.L.3
Cutting, S.4
Moran C.P., Jr.5
Losick, R.6
-
24
-
-
0030965301
-
70 subunit is responsible for the recognition of the 'extended -10' motif at promoters
-
70 subunit is responsible for the recognition of the 'extended -10' motif at promoters. EMBO J. 16, 4034-4040.
-
(1997)
EMBO J.
, vol.16
, pp. 4034-4040
-
-
Barne, K.A.1
Bown, J.A.2
Busby, S.J.W.3
Minchin, S.D.4
-
25
-
-
0029118987
-
The -16 region, a vital sequence for the utilization of a promoter in Bacillus subtilis and Escherichia coli
-
Voskuil, M.I., Voepel, K. and Chambliss, G.H. (1995) The -16 region, a vital sequence for the utilization of a promoter in Bacillus subtilis and Escherichia coli. Mol. Microbiol. 17, 271-279.
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 271-279
-
-
Voskuil, M.I.1
Voepel, K.2
Chambliss, G.H.3
-
26
-
-
0026499639
-
How a mutation in the gene encoding sigma 70 suppresses the defective heat shock response caused by a mutation in the gene encoding sigma 32
-
Zhou, Y.N. and Gross, C.A. (1992) How a mutation in the gene encoding sigma 70 suppresses the defective heat shock response caused by a mutation in the gene encoding sigma 32. J. Bacteriol. 174, 7128-7137.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7128-7137
-
-
Zhou, Y.N.1
Gross, C.A.2
-
27
-
-
0028197624
-
Target of the transcriptional activation function of phage lambda cI protein
-
Li, M., Moyle, H. and Susskind, M.M. (1994) Target of the transcriptional activation function of phage lambda cI protein. Science 263, 75-77.
-
(1994)
Science
, vol.263
, pp. 75-77
-
-
Li, M.1
Moyle, H.2
Susskind, M.M.3
-
28
-
-
0028287795
-
Amino acid substitutions in the -35 recognition motif of sigma 70 that result in defects in phage lambda repressor-stimulated transcription
-
Kuldell, N. and Hochschild, A. (1994) Amino acid substitutions in the -35 recognition motif of sigma 70 that result in defects in phage lambda repressor-stimulated transcription. J. Bacteriol. 176, 2991-2998.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2991-2998
-
-
Kuldell, N.1
Hochschild, A.2
-
29
-
-
0027742679
-
The role of the sigma subunit in promoter recognition by RNA polymerase
-
Dombroski, A.J., Walter, W.A. and Gross, C.A. (1993) The role of the sigma subunit in promoter recognition by RNA polymerase. Cell. Mol. Biol. Res. 39, 311-317.
-
(1993)
Cell. Mol. Biol. Res.
, vol.39
, pp. 311-317
-
-
Dombroski, A.J.1
Walter, W.A.2
Gross, C.A.3
-
31
-
-
0031050795
-
70-type sigma factors of group 1 and group 2
-
70-type sigma factors of group 1 and group 2. J. Bacteriol. 179, 1734-1747.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1734-1747
-
-
Gruber, T.M.1
Bryant, D.A.2
-
32
-
-
0029883461
-
Promoters from Corynebacterium glutamicum: Cloning, molecular analysis and search for a consensus motif
-
Patek, M., Eikmanns, B.J., Patek, J. and Sahm, H. (1996) Promoters from Corynebacterium glutamicum: cloning, molecular analysis and search for a consensus motif. Microbiology 142, 1297-1309.
-
(1996)
Microbiology
, vol.142
, pp. 1297-1309
-
-
Patek, M.1
Eikmanns, B.J.2
Patek, J.3
Sahm, H.4
-
33
-
-
0029041524
-
A-dependent promoter sequences: Evidence for extended contact between RNA polymerase and upstream promoter DNA
-
A-dependent promoter sequences: evidence for extended contact between RNA polymerase and upstream promoter DNA. Nucleic Acids Res. 23, 2351-2360.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2351-2360
-
-
Helmann, J.D.1
-
34
-
-
0026019013
-
Hierarchies of base pair preferences in the P22 ant promoter
-
Moyle, H., Waldburger, C. and Susskind, M.M. (1991) Hierarchies of base pair preferences in the P22 ant promoter. J. Bacteriol. 173, 1944-1950.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 1944-1950
-
-
Moyle, H.1
Waldburger, C.2
Susskind, M.M.3
-
36
-
-
0023644795
-
Constitutive function of a positively regulated promoter reveals new sequences essential for activity
-
Keilty, S. and Rosenberg, M. (1987) Constitutive function of a positively regulated promoter reveals new sequences essential for activity. J. Biol. Chem. 262, 6389-6395.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 6389-6395
-
-
Keilty, S.1
Rosenberg, M.2
-
37
-
-
0027295666
-
The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an 'extended minus 10' promoter
-
Kumar, A., Malloch, R.A., Fujita, N., Smillie, D.A., Ishihama, A. and Hayward, R.S. (1993) The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an 'extended minus 10' promoter. J. Mol. Biol. 232, 406-418.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 406-418
-
-
Kumar, A.1
Malloch, R.A.2
Fujita, N.3
Smillie, D.A.4
Ishihama, A.5
Hayward, R.S.6
-
40
-
-
0024841943
-
Nucleotide sequence of katF of Escherichia coli suggests KatF protein is a novel σ transcription factor
-
Mulvey, M.R. and Loewen, P.C. (1989) Nucleotide sequence of katF of Escherichia coli suggests KatF protein is a novel σ transcription factor. Nucleic Acids Res. 17, 9979-9991.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 9979-9991
-
-
Mulvey, M.R.1
Loewen, P.C.2
-
41
-
-
0000073165
-
Regulation of gene expression during entry into stationary phase
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Hengge-Aronis, R. (1996) Regulation of gene expression during entry into stationary phase. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1497-1512. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1497-1512
-
-
Hengge-Aronis, R.1
-
42
-
-
0027465228
-
Bacillus subtilis sporulation: Regulation of gene expression and control of morphogenesis
-
Errington, J. (1993) Bacillus subtilis sporulation: regulation of gene expression and control of morphogenesis. Microbiol. Rev. 57, 1-33.
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 1-33
-
-
Errington, J.1
-
44
-
-
0029843811
-
S as a global regulator in the osmotic control of gene expression in Escherichia coli
-
S as a global regulator in the osmotic control of gene expression in Escherichia coli. Mol. Microbiol. 21, 887-893.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 887-893
-
-
Hengge-Aronis, R.1
-
46
-
-
0028362445
-
Structure of the 5′ upstream region and the regulation of the rpoS gene of Escherichia coli
-
Takayanagi, Y., Tanaka, K. and Takahashi, H. (1994) Structure of the 5′ upstream region and the regulation of the rpoS gene of Escherichia coli. Mol. Gen. Genet. 243, 525-531.
-
(1994)
Mol. Gen. Genet.
, vol.243
, pp. 525-531
-
-
Takayanagi, Y.1
Tanaka, K.2
Takahashi, H.3
-
47
-
-
0029897937
-
The RNA-binding protein HF-1, known as a host factor for phage QB RNa replication, is essential for the translational regulation of rpoS in Escherichia coli
-
Muffler, A., Fisher, D. and Hengge-Aronis, R. (1996) The RNA-binding protein HF-1, known as a host factor for phage QB RNA replication, is essential for the translational regulation of rpoS in Escherichia coli. Genes Dev. 10, 1143-1151.
-
(1996)
Genes Dev.
, vol.10
, pp. 1143-1151
-
-
Muffler, A.1
Fisher, D.2
Hengge-Aronis, R.3
-
49
-
-
0028176450
-
S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability
-
S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability. Genes Dev. 8, 1600-1612.
-
(1994)
Genes Dev.
, vol.8
, pp. 1600-1612
-
-
Lange, R.1
Hengge-Aronis, R.2
-
51
-
-
0029082430
-
Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli
-
Lange, R., Fischer, D. and Hengge-Aronis, R. (1995) Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli. J. Bacteriol. 177, 4676-4680.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4676-4680
-
-
Lange, R.1
Fischer, D.2
Hengge-Aronis, R.3
-
52
-
-
0028030535
-
Sensing starvation: A homoserine lactone-dependent signaling pathway in Escherichia coli
-
Huisman, G.W. and Kolter, R. (1994) Sensing starvation: a homoserine lactone-dependent signaling pathway in Escherichia coli. Science 265, 537-539.
-
(1994)
Science
, vol.265
, pp. 537-539
-
-
Huisman, G.W.1
Kolter, R.2
-
53
-
-
0031906076
-
Roles of DnaK and RpoS in starvation-induced thermotolerance of Escherichia coli
-
Rockabrand, D., Livers, K., Austin, T., Kaiser, R., Jensen, D., Burgess, R. and Blum, P. (1998) Roles of DnaK and RpoS in starvation-induced thermotolerance of Escherichia coli. J. Bacteriol. 180, 846-854.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 846-854
-
-
Rockabrand, D.1
Livers, K.2
Austin, T.3
Kaiser, R.4
Jensen, D.5
Burgess, R.6
Blum, P.7
-
54
-
-
0029795631
-
Role of alternate sigma factors in starvation protein synthesis-novel mechanisms of catabolite repression
-
Matin, A. (1996) Role of alternate sigma factors in starvation protein synthesis-novel mechanisms of catabolite repression. Res. Microbiol. 147, 494-505.
-
(1996)
Res. Microbiol.
, vol.147
, pp. 494-505
-
-
Matin, A.1
-
55
-
-
0029961688
-
Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimurium
-
Bearson, S.M., Benjamin, W.H.J., Swords, W.E. and Foster, J.W. (1996) Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimurium. J. Bacteriol. 178, 2572-2579.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 2572-2579
-
-
Bearson, S.M.1
Benjamin, W.H.J.2
Swords, W.E.3
Foster, J.W.4
-
56
-
-
0027669778
-
38, is a second principal σ factor of RNa polymerase in stationary-phase Escherichia coli
-
38, is a second principal σ factor of RNA polymerase in stationary-phase Escherichia coli. Proc. Natl. Acad. Sci. USA 90, 3511-3515.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3511-3515
-
-
Tanaka, K.1
Takayanagi, Y.2
Fujita, N.3
Ishihama, A.4
Takahashi, H.5
-
57
-
-
0027382860
-
In vitro functional characterization of overproduced Escherichia coli kat F/rpoS gene product
-
Nguyen, L.H., Jensen, D.B., Thompson, N.E., Gentry, D.R. and Burgess, R.R. (1993) In vitro functional characterization of overproduced Escherichia coli kat F/rpoS gene product. Biochemistry 32, 11112-11117.
-
(1993)
Biochemistry
, vol.32
, pp. 11112-11117
-
-
Nguyen, L.H.1
Jensen, D.B.2
Thompson, N.E.3
Gentry, D.R.4
Burgess, R.R.5
-
59
-
-
0023089714
-
Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters
-
Plaskon, R.R. and Wartell, R.M. (1987) Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters. Nucleic Acids Res. 15, 785-796.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 785-796
-
-
Plaskon, R.R.1
Wartell, R.M.2
-
62
-
-
0030035254
-
Circadian clocks in prokaryotes
-
Johnson, C.H., Golden, S.S., Ishiura, M. and Kondo, T. (1996) Circadian clocks in prokaryotes. Mol. Microbiol. 21, 5-11.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 5-11
-
-
Johnson, C.H.1
Golden, S.S.2
Ishiura, M.3
Kondo, T.4
-
63
-
-
0029966080
-
A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria
-
Tsinoremas, N.F., Ishiura, M., Kondo, T., Andersson, C.R., Tanaka, K., Takahashi, H., Johnson, C.H. and Golden, S.S. (1996) A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria. EMBO J. 15, 2488-2495.
-
(1996)
EMBO J.
, vol.15
, pp. 2488-2495
-
-
Tsinoremas, N.F.1
Ishiura, M.2
Kondo, T.3
Andersson, C.R.4
Tanaka, K.5
Takahashi, H.6
Johnson, C.H.7
Golden, S.S.8
-
64
-
-
0026526439
-
Identification of multiple RNA polymerase sigma factor homologs in the cyanobacterium Anabaena sp. strain PCC 7120: Cloning, expression, and inactivation of the sigB and sigC genes
-
Brahamsha, B. and Haselkorn, R. (1992) Identification of multiple RNA polymerase sigma factor homologs in the cyanobacterium Anabaena sp. strain PCC 7120: cloning, expression, and inactivation of the sigB and sigC genes. J. Bacteriol. 174, 7273-7282.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7273-7282
-
-
Brahamsha, B.1
Haselkorn, R.2
-
65
-
-
0031466505
-
Expression of two alternative sigma factors of Synechococcus sp. strain PCC 7002 is modulated by carbon and nitrogen stress
-
Caslake, L.F., Gruber, T.M. and Bryant, D.A. (1997) Expression of two alternative sigma factors of Synechococcus sp. strain PCC 7002 is modulated by carbon and nitrogen stress. Microbiology 143, 3807-3818.
-
(1997)
Microbiology
, vol.143
, pp. 3807-3818
-
-
Caslake, L.F.1
Gruber, T.M.2
Bryant, D.A.3
-
66
-
-
0031908851
-
Characterization of the alternative sigma-factors SigD and SigE Synechococcus sp. strain PCC 7002. SigE is implicated in transcription of post-exponential-phase-specific genes
-
Gruber, T.M. and Bryant, D.A. (1998) Characterization of the alternative sigma-factors SigD and SigE Synechococcus sp. strain PCC 7002. SigE is implicated in transcription of post-exponential-phase-specific genes. Arch. Microbiol. 169, 211-219.
-
(1998)
Arch. Microbiol.
, vol.169
, pp. 211-219
-
-
Gruber, T.M.1
Bryant, D.A.2
-
67
-
-
0030856418
-
Identification of sigma factors for growth phase-related promoter selectivity of RNA polymerases from Streptomyces coelicolor A3(2)
-
Kang, J.G., Hahn, M.Y., Ishihama, A. and Roe, J.H. (1997) Identification of sigma factors for growth phase-related promoter selectivity of RNA polymerases from Streptomyces coelicolor A3(2). Nucleic Acids Res. 25, 2566-2573.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2566-2573
-
-
Kang, J.G.1
Hahn, M.Y.2
Ishihama, A.3
Roe, J.H.4
-
68
-
-
0030012602
-
RedD and actII-ORF4, pathway-specific regulatory genes for antibiotic production in Streptomyces coelicolor A3(2), are transcribed in vitro by an RNA polymerase holoenzyme containing sigma hrdD
-
Fujii, T., Gramajo, H.C., Takano, E. and Bibb, M.J. (1996) redD and actII-ORF4, pathway-specific regulatory genes for antibiotic production in Streptomyces coelicolor A3(2), are transcribed in vitro by an RNA polymerase holoenzyme containing sigma hrdD. J. Bacteriol. 178, 3402-3405.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3402-3405
-
-
Fujii, T.1
Gramajo, H.C.2
Takano, E.3
Bibb, M.J.4
-
69
-
-
0026634129
-
Construction and characterization of Streptomyces coelicolor A3(2) mutants that are multiply deficient in the nonessential hrd-encoded RNA polymerase sigma factors
-
Buttner, M.J. and Lewis, C.G. (1992) Construction and characterization of Streptomyces coelicolor A3(2) mutants that are multiply deficient in the nonessential hrd-encoded RNA polymerase sigma factors. J. Bacteriol. 174, 5165-5167.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 5165-5167
-
-
Buttner, M.J.1
Lewis, C.G.2
-
70
-
-
0025301553
-
Cloning, disruption, and transcriptional analysis of three RNA polymerase sigma factor genes of Streptomyces coelicolor A3(2)
-
Buttner, M.J., Chater, K.F. and Bibb, M.J. (1990) Cloning, disruption, and transcriptional analysis of three RNA polymerase sigma factor genes of Streptomyces coelicolor A3(2). J. Bacteriol. 172, 3367-3378.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 3367-3378
-
-
Buttner, M.J.1
Chater, K.F.2
Bibb, M.J.3
-
71
-
-
0027279431
-
Differential expression of principal sigma factor homologues of Streptomyces aureofaciens correlates with the developmental stage
-
Kormanec, J. and Farkasovsky, M. (1993) Differential expression of principal sigma factor homologues of Streptomyces aureofaciens correlates with the developmental stage. Nucleic Acids Res. 21, 3647-3652.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3647-3652
-
-
Kormanec, J.1
Farkasovsky, M.2
-
72
-
-
0026475733
-
Four genes in Streptomyces aureofaciens containing a domain characteristic of principal sigma factors
-
Kormanec, J., Farkasovsky, M. and Potuckova, L. (1992) Four genes in Streptomyces aureofaciens containing a domain characteristic of principal sigma factors. Gene 122, 63-70.
-
(1992)
Gene
, vol.122
, pp. 63-70
-
-
Kormanec, J.1
Farkasovsky, M.2
Potuckova, L.3
-
73
-
-
0028957859
-
Characterization of RNA polymerase and two sigma-factor genes from Mycobacterium smegmatis
-
Predich, M., Doukhan, L., Nair, G. and Smith, I. (1995) Characterization of RNA polymerase and two sigma-factor genes from Mycobacterium smegmatis. Mol. Microbiol. 15, 355-366.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 355-366
-
-
Predich, M.1
Doukhan, L.2
Nair, G.3
Smith, I.4
-
74
-
-
0026331092
-
Alternative sigma factors and the regulation of flagellar gene expression
-
Helmann, J.D. (1991) Alternative sigma factors and the regulation of flagellar gene expression. Mol. Microbiol. 5, 2875-2882.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 2875-2882
-
-
Helmann, J.D.1
-
75
-
-
0028018104
-
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions
-
Lonetto, M.A., Brown, K.L., Rudd, K.E. and Buttner, M.J. (1994) Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions. Proc. Natl. Acad. Sci. USA 91, 7573-7577.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 7573-7577
-
-
Lonetto, M.A.1
Brown, K.L.2
Rudd, K.E.3
Buttner, M.J.4
-
76
-
-
0027385183
-
Regulation of the heat-shock response in bacteria
-
Yura, T., Nagai, H. and Mori, H. (1993) Regulation of the heat-shock response in bacteria. Annu. Rev. Microbiol. 47, 321-350.
-
(1993)
Annu. Rev. Microbiol.
, vol.47
, pp. 321-350
-
-
Yura, T.1
Nagai, H.2
Mori, H.3
-
77
-
-
0029564954
-
Heat shock transcription factors: Structure and regulation
-
Wu, C. (1995) Heat shock transcription factors: structure and regulation. Annu. Rev. Cell Dev. Biol. 11, 441-469.
-
(1995)
Annu. Rev. Cell Dev. Biol.
, vol.11
, pp. 441-469
-
-
Wu, C.1
-
78
-
-
0030034307
-
Heat-shock and general stress response in Bacillus subtilis
-
Hecker, M., Schumann, W. and Volker, U. (1996) Heat-shock and general stress response in Bacillus subtilis. Mol. Microbiol. 19, 417-428.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 417-428
-
-
Hecker, M.1
Schumann, W.2
Volker, U.3
-
79
-
-
0028919060
-
The sigma factors of Bacillus subtilis
-
Haldenwang, W.G. (1995) The sigma factors of Bacillus subtilis. Microbiol. Rev. 59, 1-30.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 1-30
-
-
Haldenwang, W.G.1
-
80
-
-
0000887786
-
Flagella and motility
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Macnab, R.M. (1996) Flagella and motility. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 123-145. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 123-145
-
-
Macnab, R.M.1
-
82
-
-
0029070395
-
The role of anti-sigma factors in gene regulation
-
Brown, K.L. and Hughes, K.T. (1995) The role of anti-sigma factors in gene regulation. Mol. Microbiol. 16, 397-404.
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 397-404
-
-
Brown, K.L.1
Hughes, K.T.2
-
84
-
-
0027332170
-
Functional and evolutionary implications of a survey of various actinomycetes for homologues of two Streptomyces coelicolor sporulation genes
-
Soliveri, J., Vijgenboom, E., Granozzi, C., Plaskitt, K.A. and Chater, K.F. (1993) Functional and evolutionary implications of a survey of various actinomycetes for homologues of two Streptomyces coelicolor sporulation genes. J. Gen. Microbiol. 139, 2569-2578.
-
(1993)
J. Gen. Microbiol.
, vol.139
, pp. 2569-2578
-
-
Soliveri, J.1
Vijgenboom, E.2
Granozzi, C.3
Plaskitt, K.A.4
Chater, K.F.5
-
85
-
-
0024415094
-
The developmental fate of S. coelicolor hyphae depends upon a gene product homologous with the motility σ factor of B. subtilis
-
Chater, K.F., Bruton, C.J., Plaskitt, K.A., Buttner, M.J., Mendez, C. and Helmann, J.D. (1989) The developmental fate of S. coelicolor hyphae depends upon a gene product homologous with the motility σ factor of B. subtilis. Cell 59, 133-143.
-
(1989)
Cell
, vol.59
, pp. 133-143
-
-
Chater, K.F.1
Bruton, C.J.2
Plaskitt, K.A.3
Buttner, M.J.4
Mendez, C.5
Helmann, J.D.6
-
87
-
-
0029787353
-
The positions of the sigma-factor genes, whiG and sigF, in the hierarchy controlling the development of spore chains in the aerial hyphae of Streptomyces coelicolor A3(2)
-
Kelemen, G.H., Brown, G.L., Kormanec, J., Potuckova, L., Chater, K.F. and Buttner, M.J. (1996) The positions of the sigma-factor genes, whiG and sigF, in the hierarchy controlling the development of spore chains in the aerial hyphae of Streptomyces coelicolor A3(2). Mol. Microbiol. 21, 593-603.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 593-603
-
-
Kelemen, G.H.1
Brown, G.L.2
Kormanec, J.3
Potuckova, L.4
Chater, K.F.5
Buttner, M.J.6
-
88
-
-
0027399389
-
Characterization of a locus determining the mucoid status of Pseudomonas aeruginosa: AlgU shows sequence similarities with a Bacillus sigma factor
-
Martin, D.W., Holloway, B.W. and Deretic, V. (1993) Characterization of a locus determining the mucoid status of Pseudomonas aeruginosa: AlgU shows sequence similarities with a Bacillus sigma factor. J. Bacteriol. 175, 1153-1164.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 1153-1164
-
-
Martin, D.W.1
Holloway, B.W.2
Deretic, V.3
-
90
-
-
0029783759
-
Sigma factor-anti-sigma factor interaction in alginate synthesis: Inhibition of AlgT by MucA
-
Xie, Z.D., Hershberger, C.D., Shankar, S., Ye, R.W. and Chakrabarty, A.M. (1996) Sigma factor-anti-sigma factor interaction in alginate synthesis: inhibition of AlgT by MucA. J. Bacteriol. 178, 4990-4996.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 4990-4996
-
-
Xie, Z.D.1
Hershberger, C.D.2
Shankar, S.3
Ye, R.W.4
Chakrabarty, A.M.5
-
92
-
-
0030061350
-
Transcriptional regulation of the iron-responsive sigma factor gene pbrA
-
Sexton, R., Gill, Jr., P.R., Dowling, D.N. and O'Gara, F. (1996) Transcriptional regulation of the iron-responsive sigma factor gene pbrA. Mol. Gen. Genet. 250, 50-58.
-
(1996)
Mol. Gen. Genet.
, vol.250
, pp. 50-58
-
-
Sexton, R.1
Gill P.R., Jr.2
Dowling, D.N.3
O'Gara, F.4
-
93
-
-
0027440059
-
Light-induced carotenogenesis in Myxococcus xanthus: DNA sequence analysis of the carR region
-
McGowan, S.J., Gorham, H.C. and Hodgson, D.A. (1993) Light-induced carotenogenesis in Myxococcus xanthus: DNA sequence analysis of the carR region. Mol. Microbiol. 10, 713-735.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 713-735
-
-
McGowan, S.J.1
Gorham, H.C.2
Hodgson, D.A.3
-
94
-
-
0031013350
-
Sigma-E is required for the production of the antibiotic actinomycin in Streptomyces antibioticus
-
Jones, G.H., Paget, M.S., Chamberlin, L. and Buttner, M.J. (1997) Sigma-E is required for the production of the antibiotic actinomycin in Streptomyces antibioticus. Mol. Microbiol. 23, 169-178.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 169-178
-
-
Jones, G.H.1
Paget, M.S.2
Chamberlin, L.3
Buttner, M.J.4
-
95
-
-
0028105752
-
Identification of a putative alternate sigma factor and characterization of a multicomponent regulatory cascade controlling the expression of Pseudomonas syringae pv. syringae Pss61 hrp and hrma genes
-
Xiao, Y., Heu, S., Yi, J., Lu, Y. and Hutcheson, S.W. (1994) Identification of a putative alternate sigma factor and characterization of a multicomponent regulatory cascade controlling the expression of Pseudomonas syringae pv. syringae Pss61 hrp and hrmA genes. J. Bacteriol. 176, 1025-1036.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1025-1036
-
-
Xiao, Y.1
Heu, S.2
Yi, J.3
Lu, Y.4
Hutcheson, S.W.5
-
96
-
-
0027394809
-
Characterization of the inducible nickel and cobalt resistance determinant cnr from pMOL28 of Alcaligenes eutrophus CH34
-
Liesegang, H., Lemke, K., Siddiqui, R.A. and Schlegel, H.G. (1993) Characterization of the inducible nickel and cobalt resistance determinant cnr from pMOL28 of Alcaligenes eutrophus CH34. J. Bacteriol. 175, 767-778.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 767-778
-
-
Liesegang, H.1
Lemke, K.2
Siddiqui, R.A.3
Schlegel, H.G.4
-
97
-
-
0030947960
-
A mycobacterial extracytoplasmic function sigma factor involved in survival following stress
-
Wu, Q.L., Kong, D., Lam, K. and Husson, R.N. (1997) A mycobacterial extracytoplasmic function sigma factor involved in survival following stress. J. Bacteriol. 179, 2922-2929.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 2922-2929
-
-
Wu, Q.L.1
Kong, D.2
Lam, K.3
Husson, R.N.4
-
98
-
-
0029048335
-
An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Photobacterium sp. strain SS9
-
Chi, E. and Bartlett, D.H. (1995) An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Photobacterium sp. strain SS9. Mol. Microbiol. 17, 713-726.
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 713-726
-
-
Chi, E.1
Bartlett, D.H.2
-
99
-
-
0030770179
-
Sequence of the Bacillus subtilis genome region in the vinity of the lev operon reveals two new extracytoplasmic function RNA polymerase sigma factors SigV and SigZ
-
Sorokin, A., Bolotin, A., Purnelle, B., Hubert, H., Lauber, J., Dusterhoft, A. and Ehrlich, S.D. (1997) Sequence of the Bacillus subtilis genome region in the vinity of the lev operon reveals two new extracytoplasmic function RNA polymerase sigma factors SigV and SigZ. Microbiology 143, 2939-2943.
-
(1997)
Microbiology
, vol.143
, pp. 2939-2943
-
-
Sorokin, A.1
Bolotin, A.2
Purnelle, B.3
Hubert, H.4
Lauber, J.5
Dusterhoft, A.6
Ehrlich, S.D.7
-
100
-
-
0030731108
-
The complete genome sequence of the gram-positive bacterium Bacillus subtilis
-
Kunst, F., Ogasawara, N., Moszer, I., Albertini, A.M., Alloni, G., Azevedo, V., Bertero, M.G., Bessieres, P., Bolotin, A., Borchert, S., Borriss, R., Boursier, L., Brans, A., Braun, M., Brignell, S.C., Bron, S., Brouillet, S., Bruschi, C.V., Caldwell, B., Capuano, V., Carter, N.M., Choi, S.K., Codani, J.J., Connerton, I.F. and Danchin, A. (1997) The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390, 249-256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
Borriss, R.11
Boursier, L.12
Brans, A.13
Braun, M.14
Brignell, S.C.15
Bron, S.16
Brouillet, S.17
Bruschi, C.V.18
Caldwell, B.19
Capuano, V.20
Carter, N.M.21
Choi, S.K.22
Codani, J.J.23
Connerton, I.F.24
Danchin, A.25
more..
-
101
-
-
0030971546
-
X protein is an extracytoplasmic function σ factor contributing to survival at high temperature
-
X protein is an extracytoplasmic function σ factor contributing to survival at high temperature. J. Bacteriol. 179, 2915-2921.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 2915-2921
-
-
Huang, X.1
Decatur, A.2
Sorokin, A.3
Helmann, J.D.4
-
102
-
-
0030763077
-
The response to extracytoplasmic stress in Escherichia coli is controlled by partially overlapping pathways
-
Connolly, L., De Las Penas, A., Alba, B.M. and Gross, C.A. (1997) The response to extracytoplasmic stress in Escherichia coli is controlled by partially overlapping pathways. Genes Dev. 11, 2012-2021.
-
(1997)
Genes Dev.
, vol.11
, pp. 2012-2021
-
-
Connolly, L.1
De Las Penas, A.2
Alba, B.M.3
Gross, C.A.4
-
103
-
-
0030065962
-
Light-induced carotenogenesis in Myxococcus xanthus: Light-dependent membrane sequestration of ECF sigma factor CarQ by anti-sigma factor CarR
-
Gorham, H.C., McGowan, S.J., Robson, P.R. and Hodgson, D.A. (1996) Light-induced carotenogenesis in Myxococcus xanthus: light-dependent membrane sequestration of ECF sigma factor CarQ by anti-sigma factor CarR. Mol. Microbiol. 19, 171-186.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 171-186
-
-
Gorham, H.C.1
McGowan, S.J.2
Robson, P.R.3
Hodgson, D.A.4
-
105
-
-
0028907529
-
E, in Escherichia coli
-
E, in Escherichia coli. EMBO J. 14, 1032-1042.
-
(1995)
EMBO J.
, vol.14
, pp. 1032-1042
-
-
Rouviere, P.E.1
De Las Penas, A.2
Mecsas, J.3
Lu, C.Z.4
Rudd, K.E.5
Gross, C.A.6
-
106
-
-
0030671325
-
SigX of Bacillus subtilis replaces the ECF sigma factor feel of Escherichia coli and is inhibited by RsiX
-
Brutsche, S. and Braun, V. (1997) SigX of Bacillus subtilis replaces the ECF sigma factor feel of Escherichia coli and is inhibited by RsiX. Mol. Gen. Genet. 256, 416-425.
-
(1997)
Mol. Gen. Genet.
, vol.256
, pp. 416-425
-
-
Brutsche, S.1
Braun, V.2
-
107
-
-
0001241680
-
Function and regulation of the heat shock proteins
-
Neidhardt, F.C., Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Gross, C.A. (1996) Function and regulation of the heat shock proteins. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Neidhardt, F.C., Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1382-1399. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1382-1399
-
-
Gross, C.A.1
-
108
-
-
0028843890
-
32 homologs from Gram-negative bacteria: Conserved mRNA and protein segments for heat shock regulation
-
32 homologs from Gram-negative bacteria: conserved mRNA and protein segments for heat shock regulation. Nucleic Acids Res. 23, 4383-4390.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4383-4390
-
-
Nakahigashi, K.1
Yanagi, H.2
Yura, T.3
-
110
-
-
0029031521
-
E, is essential for bacterial growth at high temperature
-
E, is essential for bacterial growth at high temperature. J. Bacteriol. 177, 2918-2922.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 2918-2922
-
-
Hiratsu, K.1
Amemura, M.2
Nashimoto, H.3
Shinagawa, H.4
Makino, K.5
-
112
-
-
0029060112
-
32
-
32. EMBO J. 14, 2551-2560.
-
(1995)
EMBO J.
, vol.14
, pp. 2551-2560
-
-
Tomoyasu, T.1
Gamer, J.2
Bukau, B.3
Kanemori, M.4
Mori, H.5
Rutman, A.J.6
Oppenheim, A.B.7
Yura, T.8
Yamanaka, K.9
Niki, H.10
Hirage, S.11
Ogura, T.12
-
113
-
-
0030044799
-
32
-
32. EMBO J. 15, 607-617.
-
(1996)
EMBO J.
, vol.15
, pp. 607-617
-
-
Gamer, J.1
Multhaup, G.2
Tomoyasu, T.3
McCarty, J.S.4
Rüdiger, S.5
Schönfeld, H.J.6
Schirra, C.7
Bujard, H.8
Bukau, B.9
-
114
-
-
0025144275
-
Development-specific σ-factor essential for late-stage differentiation of Myxococcus xanthus
-
Apelian, D. and Inouye, S. (1990) Development-specific σ-factor essential for late-stage differentiation of Myxococcus xanthus. Genes Dev. 4, 1396-1403.
-
(1990)
Genes Dev.
, vol.4
, pp. 1396-1403
-
-
Apelian, D.1
Inouye, S.2
-
115
-
-
0027093115
-
Cloning and DNA sequence of sigB gene of Stigmatella aurantiaca
-
Skladny, H., Heidelbach, M. and Schairer, H.U. (1992) Cloning and DNA sequence of sigB gene of Stigmatella aurantiaca. Nucleic Acids Res. 20, 6416.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6416
-
-
Skladny, H.1
Heidelbach, M.2
Schairer, H.U.3
-
116
-
-
0027284689
-
A new putative sigma factor of Myxococcus xanthus
-
Apelian, D. and Inouye, S. (1993) A new putative sigma factor of Myxococcus xanthus. J. Bacteriol. 175, 3335-3342.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3335-3342
-
-
Apelian, D.1
Inouye, S.2
-
117
-
-
0028886149
-
Genetics of gliding motility and development in Myxococcus xanthus
-
Hartzell, P.L. and Youderian, P. (1995) Genetics of gliding motility and development in Myxococcus xanthus. Arch. Microbiol. 164, 309-323.
-
(1995)
Arch. Microbiol.
, vol.164
, pp. 309-323
-
-
Hartzell, P.L.1
Youderian, P.2
-
118
-
-
0028889674
-
The dnaKJ operon of Agrobacterium tumefaciens: Transcriptional analysis and evidence for a new heat shock promoter
-
Segal, G. and Ron, E.Z. (1995) The dnaKJ operon of Agrobacterium tumefaciens: transcriptional analysis and evidence for a new heat shock promoter. J. Bacteriol. 177, 5952-5958.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 5952-5958
-
-
Segal, G.1
Ron, E.Z.2
-
119
-
-
0029818827
-
Sigma-B, a putative operon encoding alternate sigma factor of Staphylococcus aureus RNA polymerase: Molecular cloning and DNa sequencing
-
Wu, S., de Lencastre, H. and Tomasz, A. (1996) Sigma-B, a putative operon encoding alternate sigma factor of Staphylococcus aureus RNA polymerase: molecular cloning and DNA sequencing. J. Bacteriol. 178, 6036-6042.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6036-6042
-
-
Wu, S.1
De Lencastre, H.2
Tomasz, A.3
-
120
-
-
0029981245
-
A stationary-phase stress-response sigma factor from Mycobacterium tuberculosis
-
DeMaio, J., Zhang, Y., Ko, C., Young, D.B. and Bishai, W.R. (1996) A stationary-phase stress-response sigma factor from Mycobacterium tuberculosis. Proc. Natl. Acad. Sci. USA 93, 2790-2794.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 2790-2794
-
-
DeMaio, J.1
Zhang, Y.2
Ko, C.3
Young, D.B.4
Bishai, W.R.5
-
121
-
-
0029143839
-
F, is required for the late stages of morphological differentiation in Streptomyces spp
-
F, is required for the late stages of morphological differentiation in Streptomyces spp. Mol. Microbiol. 17, 37-48.
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 37-48
-
-
Potuckova, L.1
Kelemen, G.H.2
Findlay, K.C.3
Lonetto, M.A.4
Buttner, M.J.5
Kormanec, J.6
-
123
-
-
0030581172
-
Role of adenosine nucleotides in the regulation of a stress response transcription factor in Bacillus subtilis
-
Alper, S., Dufour, A., Garsin, D., Duncan, L. and Losick, R. (1996) Role of adenosine nucleotides in the regulation of a stress response transcription factor in Bacillus subtilis. J. Mol. Biol. 260, 165-177.
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 165-177
-
-
Alper, S.1
Dufour, A.2
Garsin, D.3
Duncan, L.4
Losick, R.5
-
124
-
-
0028859016
-
B in response to environmental signals
-
B in response to environmental signals. J. Bacteriol. 177, 123-133.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 123-133
-
-
Wise, A.A.1
Price, C.W.2
-
125
-
-
0028219826
-
Analysis of the induction of general stress proteins of Bacillus subtilis
-
Volker, U., Engelmann, S., Maul, B., Riethdorf, S., Volker, A., Schmid, R., Mach, H. and Hecker, M. (1994) Analysis of the induction of general stress proteins of Bacillus subtilis. Microbiology 140, 741-752.
-
(1994)
Microbiology
, vol.140
, pp. 741-752
-
-
Volker, U.1
Engelmann, S.2
Maul, B.3
Riethdorf, S.4
Volker, A.5
Schmid, R.6
Mach, H.7
Hecker, M.8
-
126
-
-
0031968766
-
Developmental regulation of transcription of whiE, a locus specifying the polyketide spore pigment in Streptomyces coelicolor A3(2)
-
Kelemen, G.H., Brian, P., Flärdh, K., Chamberlin, L., Chater, K.F. and Buttner, M.J. (1998) Developmental regulation of transcription of whiE, a locus specifying the polyketide spore pigment in Streptomyces coelicolor A3(2). J. Bacteriol. 180, 2515-2521.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2515-2521
-
-
Kelemen, G.H.1
Brian, P.2
Flärdh, K.3
Chamberlin, L.4
Chater, K.F.5
Buttner, M.J.6
-
127
-
-
0022991837
-
Physiological responses of Bacteroides and Clostridium strains to environmental stress factors
-
Woods, D.R. and Jones, D.T. (1986) Physiological responses of Bacteroides and Clostridium strains to environmental stress factors. Adv. Microb. Physiol. 28, 1-64.
-
(1986)
Adv. Microb. Physiol.
, vol.28
, pp. 1-64
-
-
Woods, D.R.1
Jones, D.T.2
-
128
-
-
0345430075
-
Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis
-
Grossman, A.D. (1995) Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis. Annu. Rev. Genet. 176, 2587-2595.
-
(1995)
Annu. Rev. Genet.
, vol.176
, pp. 2587-2595
-
-
Grossman, A.D.1
-
129
-
-
0028792451
-
Sigma factor and sporulation genes in Clostridium
-
Sauer, U., Santangelo, J.D., Treuner, A., Buchholz, M. and Durre, P. (1995) Sigma factor and sporulation genes in Clostridium. FEMS Microbiol. Rev. 17, 331-340.
-
(1995)
FEMS Microbiol. Rev.
, vol.17
, pp. 331-340
-
-
Sauer, U.1
Santangelo, J.D.2
Treuner, A.3
Buchholz, M.4
Durre, P.5
-
130
-
-
0026500823
-
Crisscross regulation of cell-type-specific gene expression during development in B. subtilis
-
Losick, R. and Stragier, P. (1992) Crisscross regulation of cell-type-specific gene expression during development in B. subtilis. Nature 355, 601-604.
-
(1992)
Nature
, vol.355
, pp. 601-604
-
-
Losick, R.1
Stragier, P.2
-
131
-
-
0027384770
-
Genetics of differentiation in Streptomyces
-
Chater, K.F. (1993) Genetics of differentiation in Streptomyces. Annu. Rev. Microbiol. 47, 685-713.
-
(1993)
Annu. Rev. Microbiol.
, vol.47
, pp. 685-713
-
-
Chater, K.F.1
-
133
-
-
0027476641
-
Integration of multiple developmental signals in Bacillus subtilis through the SpoOA transcription factor
-
Ireton, K., Rudner, D.Z., Siranosian, K.J. and Grossman, A.D. (1993) Integration of multiple developmental signals in Bacillus subtilis through the SpoOA transcription factor. Genes Dev. 7, 283-294.
-
(1993)
Genes Dev.
, vol.7
, pp. 283-294
-
-
Ireton, K.1
Rudner, D.Z.2
Siranosian, K.J.3
Grossman, A.D.4
-
134
-
-
0025755686
-
Transcription of the Bacillus subtilis spoIIA locus
-
Wu, J.J., Piggot, P.J., Tatti, K.M. and Moran, Jr., C.P. (1991) Transcription of the Bacillus subtilis spoIIA locus. Gene 101, 113-116.
-
(1991)
Gene
, vol.101
, pp. 113-116
-
-
Wu, J.J.1
Piggot, P.J.2
Tatti, K.M.3
Moran C.P., Jr.4
-
136
-
-
0027478595
-
The minCD locus of Bacillus subtilis lacks the minE determinant that provides topological specificity to cell division
-
Lee, S. and Price, C.W. (1993) The minCD locus of Bacillus subtilis lacks the minE determinant that provides topological specificity to cell division. Mol. Microbiol. 7, 601-610.
-
(1993)
Mol. Microbiol.
, vol.7
, pp. 601-610
-
-
Lee, S.1
Price, C.W.2
-
137
-
-
0026589395
-
Developmental regulation of transcription of the Bacillus subtilis ftsAZ operon
-
Gonzy-Treboul, G., Karmazyn-Campelli, C. and Stragier, P. (1992) Developmental regulation of transcription of the Bacillus subtilis ftsAZ operon. J. Mol. Biol. 224, 967-979.
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 967-979
-
-
Gonzy-Treboul, G.1
Karmazyn-Campelli, C.2
Stragier, P.3
-
138
-
-
0025215602
-
The SpoOa protein of Bacillus subtilis is a repressor of the abrB gene
-
Strauch, M.A., Webb, V., Spiegelman, B. and Hoch, J.A. (1990) The SpoOA protein of Bacillus subtilis is a repressor of the abrB gene. Proc. Natl. Acad. Sci. USA 87, 1801-1805.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 1801-1805
-
-
Strauch, M.A.1
Webb, V.2
Spiegelman, B.3
Hoch, J.A.4
-
140
-
-
0025175708
-
Two amino acids in an RNA polymerase sigma factor involved in the recognition of adjacent base pairs in the -10 region of a cognate promoter
-
Daniels, D., Zuber, P. and Losick, R. (1990) Two amino acids in an RNA polymerase sigma factor involved in the recognition of adjacent base pairs in the -10 region of a cognate promoter. Proc. Natl. Acad. Sci. USA 87, 8075-8079.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 8075-8079
-
-
Daniels, D.1
Zuber, P.2
Losick, R.3
-
141
-
-
0022239081
-
Duplicated sporulation genes in bacteria: Implications for simple developmental systems
-
Errington, J., Port, P. and Mandelstam, J. (1985) Duplicated sporulation genes in bacteria: implications for simple developmental systems. FEBS Lett. 188, 184-188.
-
(1985)
FEBS Lett.
, vol.188
, pp. 184-188
-
-
Errington, J.1
Port, P.2
Mandelstam, J.3
-
142
-
-
0024458597
-
Timing of spoII gene expression relative to septum formation during sporulation of Bacillus subtilis
-
Gholamhoseinian, A. and Piggot, P.J. (1989) Timing of spoII gene expression relative to septum formation during sporulation of Bacillus subtilis. J. Bacteriol. 171, 5747-5749.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5747-5749
-
-
Gholamhoseinian, A.1
Piggot, P.J.2
-
143
-
-
0026317041
-
Establishment of cell type by compartmentalized activation of a transcription factor
-
Margolis, P., Driks, A. and Losick, R. (1991) Establishment of cell type by compartmentalized activation of a transcription factor. Science 254, 562-565.
-
(1991)
Science
, vol.254
, pp. 562-565
-
-
Margolis, P.1
Driks, A.2
Losick, R.3
-
147
-
-
0026528522
-
Binding of SpoOA stimulates spoIIG promoter activity in Bacillus subtilis
-
Satola, S.W., Baldus, J.M. and Moran, C.P. (1992) Binding of SpoOA stimulates spoIIG promoter activity in Bacillus subtilis. J. Bacteriol. 174, 1448-1453.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 1448-1453
-
-
Satola, S.W.1
Baldus, J.M.2
Moran, C.P.3
-
149
-
-
0023853759
-
Processing of a sporulation sigma factor in Bacillus subtilis: How morphological structure could control gene expression
-
Stragier, P., Bonamy, C. and Karmazyn-Campelli, C. (1988) Processing of a sporulation sigma factor in Bacillus subtilis: how morphological structure could control gene expression. Cell 52, 697-704.
-
(1988)
Cell
, vol.52
, pp. 697-704
-
-
Stragier, P.1
Bonamy, C.2
Karmazyn-Campelli, C.3
-
151
-
-
0022479580
-
Transcriptional control of the Bacillus subtilis spoIID gene
-
Rong, S., Rosenkrantz, M.S. and Sonenshein, A.L. (1986) Transcriptional control of the Bacillus subtilis spoIID gene. J. Bacteriol. 165, 771-779.
-
(1986)
J. Bacteriol.
, vol.165
, pp. 771-779
-
-
Rong, S.1
Rosenkrantz, M.S.2
Sonenshein, A.L.3
-
153
-
-
0022608950
-
Isolation of Bacillus subtilis genes transcribed in vitro and in vivo by a major sporulation-induced, DNA-dependent RNA polymerase
-
Ray, G.L. and Haldenwang, W.G. (1986) Isolation of Bacillus subtilis genes transcribed in vitro and in vivo by a major sporulation-induced, DNA-dependent RNA polymerase. J. Bacteriol. 166, 472-478.
-
(1986)
J. Bacteriol.
, vol.166
, pp. 472-478
-
-
Ray, G.L.1
Haldenwang, W.G.2
-
154
-
-
0028885996
-
Sequence-specific interactions between promoter DNA and the RNA polymerase sigma factor E
-
Tatti, K.M., Shuler, M.F. and Moran, Jr., C.P. (1995) Sequence-specific interactions between promoter DNA and the RNA polymerase sigma factor E. J. Mol. Biol. 253, 8-16.
-
(1995)
J. Mol. Biol.
, vol.253
, pp. 8-16
-
-
Tatti, K.M.1
Shuler, M.F.2
Moran C.P., Jr.3
-
155
-
-
0026567712
-
Characterization of spoIVA, a sporulation gene involved in coat morphogenesis in Bacillus subtilis
-
Roels, S., Driks, A. and Losick, R. (1992) Characterization of spoIVA, a sporulation gene involved in coat morphogenesis in Bacillus subtilis. J. Bacteriol. 174, 575-585.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 575-585
-
-
Roels, S.1
Driks, A.2
Losick, R.3
-
156
-
-
0024618903
-
Tandem genes encoding σ-factors for consecutive steps of development in Bacillus subtilis
-
Karmazyn-Campelli, C., Bonamy, C., Savelli, B. and Stragier, P. (1989) Tandem genes encoding σ-factors for consecutive steps of development in Bacillus subtilis. Genes Dev. 3, 150-157.
-
(1989)
Genes Dev.
, vol.3
, pp. 150-157
-
-
Karmazyn-Campelli, C.1
Bonamy, C.2
Savelli, B.3
Stragier, P.4
-
157
-
-
0027999820
-
Sporulation and primary sigma factor homologous genes in Clostridium acetobutylicum
-
Sauer, U., Treuner, A., Buchholz, M., Santangelo, J.D. and Durre, P. (1994) Sporulation and primary sigma factor homologous genes in Clostridium acetobutylicum. J. Bacteriol. 176, 6572-6582.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 6572-6582
-
-
Sauer, U.1
Treuner, A.2
Buchholz, M.3
Santangelo, J.D.4
Durre, P.5
-
158
-
-
0024615212
-
Identification of a new σ-factor involved in compartmentalized gene expression during sporulation of Bacillus subtilis
-
Sun, D.X., Stragier, P. and Setlow, P. (1989) Identification of a new σ-factor involved in compartmentalized gene expression during sporulation of Bacillus subtilis. Genes Dev. 3, 141-149.
-
(1989)
Genes Dev.
, vol.3
, pp. 141-149
-
-
Sun, D.X.1
Stragier, P.2
Setlow, P.3
-
159
-
-
0024670904
-
G-containing RNa polymerase from sporulating cells of Bacillus subtilis: Identification of a group of forespore-specific promoters
-
G-containing RNA polymerase from sporulating cells of Bacillus subtilis: identification of a group of forespore-specific promoters. J. Bacteriol. 171, 2708-2718.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2708-2718
-
-
Nicholson, W.L.1
Sun, D.X.2
Setlow, B.3
Setlow, P.4
-
160
-
-
0024499208
-
Chromosomal rearrangement generating a composite gene for a developmental transcription factor
-
Stragier, P., Kunkel, B., Kroos, L. and Losick, R. (1989) Chromosomal rearrangement generating a composite gene for a developmental transcription factor. Science 243, 507-512.
-
(1989)
Science
, vol.243
, pp. 507-512
-
-
Stragier, P.1
Kunkel, B.2
Kroos, L.3
Losick, R.4
-
161
-
-
0028044972
-
Expression of the Bacillus subtilis spoIVCa gene, which encodes a site-specific recombinase, depends on the spoIIGB product
-
Sato, T., Harada, K., Ohta, Y. and Kobayashi, Y. (1994) Expression of the Bacillus subtilis spoIVCA gene, which encodes a site-specific recombinase, depends on the spoIIGB product. J. Bacteriol. 176, 935-937.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 935-937
-
-
Sato, T.1
Harada, K.2
Ohta, Y.3
Kobayashi, Y.4
-
162
-
-
0023812830
-
The promoter for a sporulation gene in the spoIVC locus of Bacillus subtilis and its use in studies of temporal and spatial control of gene expression
-
Kunkel, B., Sandman, K., Panzer, S., Youngman, P. and Losick, R. (1988) The promoter for a sporulation gene in the spoIVC locus of Bacillus subtilis and its use in studies of temporal and spatial control of gene expression. J. Bacteriol. 170, 3513-3522.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 3513-3522
-
-
Kunkel, B.1
Sandman, K.2
Panzer, S.3
Youngman, P.4
Losick, R.5
-
164
-
-
0025321632
-
Cascade regulation of spore coat gene expression in Bacillus subtilis
-
Zheng, L.B. and Losick, R. (1990) Cascade regulation of spore coat gene expression in Bacillus subtilis. J. Mol. Biol. 212, 645-660.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 645-660
-
-
Zheng, L.B.1
Losick, R.2
-
165
-
-
0027237803
-
Cloning, DNA sequence, functional analysis and transcriptional regulation of the genes encoding dipicolinic acid synthetase required for sporulation in Bacillus subtilis
-
Daniel, R.A. and Errington, J. (1993) Cloning, DNA sequence, functional analysis and transcriptional regulation of the genes encoding dipicolinic acid synthetase required for sporulation in Bacillus subtilis. J. Mol. Biol. 232, 468-483.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 468-483
-
-
Daniel, R.A.1
Errington, J.2
-
166
-
-
0030986446
-
A feedback loop regulates the switch from one sigma factor to the next in the cascade controlling Bacillus subtilis mother cell gene expression
-
Zhang, B. and Kroos, L. (1997) A feedback loop regulates the switch from one sigma factor to the next in the cascade controlling Bacillus subtilis mother cell gene expression. J. Bacteriol. 179, 6138-6144.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6138-6144
-
-
Zhang, B.1
Kroos, L.2
-
167
-
-
0026442571
-
Sporulation regulatory protein GerE from Bacillus subtilis binds to and can activate or repress transcription from promoters for mother-cell-specific genes
-
Zheng, L., Halberg, R., Roels, S., Ichikawa, H., Kroos, L. and Losick, R. (1992) Sporulation regulatory protein GerE from Bacillus subtilis binds to and can activate or repress transcription from promoters for mother-cell-specific genes. J. Mol. Biol. 226, 1037-1050.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 1037-1050
-
-
Zheng, L.1
Halberg, R.2
Roels, S.3
Ichikawa, H.4
Kroos, L.5
Losick, R.6
-
170
-
-
0028301602
-
DNA distortion and nucleation of local DNA unwinding within sigma-54 (sigma N) holoenzyme closed promoter complexes
-
Morris, L., Cannon, W., Claverie Martin, F., Austin, S. and Buck, M. (1994) DNA distortion and nucleation of local DNA unwinding within sigma-54 (sigma N) holoenzyme closed promoter complexes. J. Biol. Chem. 269, 11563-11571.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 11563-11571
-
-
Morris, L.1
Cannon, W.2
Claverie Martin, F.3
Austin, S.4
Buck, M.5
-
172
-
-
0029670970
-
54-dependent regulators: Derepression as a control mechanism
-
54-dependent regulators: derepression as a control mechanism. Mol. Microbiol. 19, 409-416.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 409-416
-
-
Shingler, V.1
-
174
-
-
0028038237
-
Purification and DNA-binding properties of FHLA, the transcriptional activator of the formate hydrogenlyase system from Escherichia coli
-
Schlensog, V., Lutz, S. and Bock, A. (1994) Purification and DNA-binding properties of FHLA, the transcriptional activator of the formate hydrogenlyase system from Escherichia coli. J. Biol. Chem. 269, 19590-19596.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 19590-19596
-
-
Schlensog, V.1
Lutz, S.2
Bock, A.3
-
175
-
-
0028980296
-
54-dependent promoter Ps of the TOL plasmid of Pseudomonas putida requires HU for transcriptional activation in vivo by XylR
-
54-dependent promoter Ps of the TOL plasmid of Pseudomonas putida requires HU for transcriptional activation in vivo by XylR. J. Bacteriol. 177, 3758-3763.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 3758-3763
-
-
Perez-Martin, J.1
De Lorenzo, V.2
-
176
-
-
0011064770
-
Products of nitrogen regulatory genes ntra and ntrC of enteric bacteria activate glna transcription in vitro: Evidence that the ntra product is a sigma factor
-
Hirschman, J., Wong, P.K., Sei, K., Keener, J. and Kustu, S. (1985) Products of nitrogen regulatory genes ntrA and ntrC of enteric bacteria activate glnA transcription in vitro: evidence that the ntrA product is a sigma factor. Proc. Natl. Acad. Sci. USA 82, 7525-7529.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 7525-7529
-
-
Hirschman, J.1
Wong, P.K.2
Sei, K.3
Keener, J.4
Kustu, S.5
-
177
-
-
0021223757
-
Regulation of nitrogen fixation genes
-
Ausubel, F.M. (1996) Regulation of nitrogen fixation genes. Cell 37, 5-6.
-
(1996)
Cell
, vol.37
, pp. 5-6
-
-
Ausubel, F.M.1
-
179
-
-
0028958606
-
ts mutant
-
ts mutant. J. Biol. Chem. 270, 4822-4839.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 4822-4839
-
-
Powell, B.S.1
Court, D.L.2
Inada, T.3
Nakamura, Y.4
Michotey, V.5
Cui, X.6
Reizer, A.7
Saier, M.H.J.8
Reizer, J.9
-
181
-
-
0022373403
-
Characterization of nif regulatory genes in Rhodopseudomonas capsulata using lac gene fusions
-
Kranz, R.G. and Haselkorn, R. (1985) Characterization of nif regulatory genes in Rhodopseudomonas capsulata using lac gene fusions. Gene 40, 203-215.
-
(1985)
Gene
, vol.40
, pp. 203-215
-
-
Kranz, R.G.1
Haselkorn, R.2
-
182
-
-
0027050868
-
A temporally controlled σ-factor is required for polar morphogenesis and normal cell division in Caulobacter
-
Brun, Y.V. and Shapiro, L. (1992) A temporally controlled σ-factor is required for polar morphogenesis and normal cell division in Caulobacter. Genes Dev. 6, 2395-2408.
-
(1992)
Genes Dev.
, vol.6
, pp. 2395-2408
-
-
Brun, Y.V.1
Shapiro, L.2
-
183
-
-
0031898483
-
The Rhizobium etli rpoN locus: DNA sequence analysis and phenotypical characterization of rpoN, ptsN, and ptsA mutants
-
Michiels, J., Van Soom, T., D'hooghe, I., Dombrecht, B., Benhassine, T., de Wilde, P. and Vanderleyden, J. (1998) The Rhizobium etli rpoN locus: DNA sequence analysis and phenotypical characterization of rpoN, ptsN, and ptsA mutants. J. Bacteriol. 180, 1729-1740.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 1729-1740
-
-
Michiels, J.1
Van Soom, T.2
D'hooghe, I.3
Dombrecht, B.4
Benhassine, T.5
De Wilde, P.6
Vanderleyden, J.7
-
184
-
-
0029831067
-
The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing
-
Dombroski, A.J., Johnson, B.D., Lonetto, M. and Gross, C.A. (1996) The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing. Proc. Natl. Acad. Sci. USA 93, 8858-8862.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 8858-8862
-
-
Dombroski, A.J.1
Johnson, B.D.2
Lonetto, M.3
Gross, C.A.4
-
185
-
-
0030161428
-
Flexible response: DNA supercoiling, transcription and bacterial adaptation to environmental stress
-
Dorman, C.J. (1996) Flexible response: DNA supercoiling, transcription and bacterial adaptation to environmental stress. Trends Microbiol. 4, 214-216.
-
(1996)
Trends Microbiol.
, vol.4
, pp. 214-216
-
-
Dorman, C.J.1
-
186
-
-
0021891874
-
Mechanism and control of transcription initiation in prokaryotes
-
McClure, W.R. (1985) Mechanism and control of transcription initiation in prokaryotes. Annu. Rev. Biochem. 54, 171-204.
-
(1985)
Annu. Rev. Biochem.
, vol.54
, pp. 171-204
-
-
McClure, W.R.1
-
187
-
-
0000661051
-
Organization and function of transcription regulatory elements
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Gralla, J.D. and Collado-Vides, J. (1996) Organization and function of transcription regulatory elements. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1232-1245. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1232-1245
-
-
Gralla, J.D.1
Collado-Vides, J.2
-
188
-
-
0028167556
-
Role of the sigma 70 subunit of Escherichia coli RNA polymerase in transcription activation
-
Kumar, A., Grimes, B., Fujita, N., Makino, K., Malloch, R.A., Hayward, R.S. and Ishihama, A. (1994) Role of the sigma 70 subunit of Escherichia coli RNA polymerase in transcription activation. J. Mol. Biol. 235, 405-413.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 405-413
-
-
Kumar, A.1
Grimes, B.2
Fujita, N.3
Makino, K.4
Malloch, R.A.5
Hayward, R.S.6
Ishihama, A.7
-
189
-
-
0028234761
-
Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H-NS
-
Zuber, F., Kotlarz, D., Rimsky, S. and Buc, H. (1994) Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H-NS. Mol. Microbiol. 12, 231-240.
-
(1994)
Mol. Microbiol.
, vol.12
, pp. 231-240
-
-
Zuber, F.1
Kotlarz, D.2
Rimsky, S.3
Buc, H.4
-
190
-
-
0026793461
-
Evidence for global regulatory control of pilus expression in Escherichia coli by Lrp and DNA methylation: Model building based on analysis of pap
-
van der Woude, M.W., Braaten, B.A. and Low, D.A. (1992) Evidence for global regulatory control of pilus expression in Escherichia coli by Lrp and DNA methylation: model building based on analysis of pap. Mol. Microbiol. 6, 2429-2435.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2429-2435
-
-
Van Der Woude, M.W.1
Braaten, B.A.2
Low, D.A.3
-
191
-
-
0003174053
-
The stringent response
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Cashel, M., Gentry, D.R., Hernandez, V.J. and Vinella, D. (1996) The stringent response. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1458-1496. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1458-1496
-
-
Cashel, M.1
Gentry, D.R.2
Hernandez, V.J.3
Vinella, D.4
-
193
-
-
0000847987
-
Regulation of ribosome synthesis
-
Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds., American Society for Microbiology, Washington, DC
-
Keener, J. and Nomura, M. (1996) Regulation of ribosome synthesis. In: Escherichia coli and Salmonella Cellular and Molecular Biology (Curtiss III, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E., Eds.), pp. 1417-1431. American Society for Microbiology, Washington, DC.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1417-1431
-
-
Keener, J.1
Nomura, M.2
-
194
-
-
0027048626
-
Genetics and biogenesis of bacterial flagella
-
Macnab, R.M. (1992) Genetics and biogenesis of bacterial flagella. Annu. Rev. Genet. 26, 131-158.
-
(1992)
Annu. Rev. Genet.
, vol.26
, pp. 131-158
-
-
Macnab, R.M.1
-
196
-
-
0027328345
-
F, the first compartment-specific transcription factor of B. subtilis, is regulated by an anti-σ factor that is also a protein kinase
-
F, the first compartment-specific transcription factor of B. subtilis, is regulated by an anti-σ factor that is also a protein kinase. Cell 74, 735-742.
-
(1993)
Cell
, vol.74
, pp. 735-742
-
-
Min, K.T.1
Hilditch, C.M.2
Diederich, B.3
Errington, J.4
Yudkin, M.D.5
-
197
-
-
0027267656
-
Mechanism of conversion to mucoidy in Pseudomonas aeruginosa infecting cystic fibrosis patients
-
Martin, D.W., Schurr, M.J., Mudd, M.H., Govan, J.R., Holloway, B.W. and Deretic, V. (1993) Mechanism of conversion to mucoidy in Pseudomonas aeruginosa infecting cystic fibrosis patients. Proc. Natl. Acad. Sci. USA 90, 8377-8381.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 8377-8381
-
-
Martin, D.W.1
Schurr, M.J.2
Mudd, M.H.3
Govan, J.R.4
Holloway, B.W.5
Deretic, V.6
-
198
-
-
0030907038
-
E (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins
-
E (RpoE) heat-shock transcription-factor activity by the RseA, RseB and RseC proteins. Mol. Microbiol. 24, 355-371.
-
(1997)
Mol. Microbiol.
, vol.24
, pp. 355-371
-
-
Missiakas, D.1
Mayer, M.P.2
Lemaire, M.3
Georgopoulos, C.4
Raina, S.5
-
200
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Kerlavage, A.R., Bult, C.J., Tomb, J.F., Dougherty, B.A. and Merrick, J.M. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269, 496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kerlavage, A.R.6
Bult, C.J.7
Tomb, J.F.8
Dougherty, B.A.9
Merrick, J.M.10
-
201
-
-
0030606607
-
Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
-
Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S., Kimura, T., Hosouchi, T., Matsuno, A., Muraki, A., Nakazaki, N., Naruo, K., Okumura, S., Shimpo, S., Takeuchi, C., Wada, T., Watanabe, A., Yamada, M., Yasuda, M. and Tabata, S. (1996) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. DNA Res. 3, 109-136.
-
(1996)
DNA Res.
, vol.3
, pp. 109-136
-
-
Kaneko, T.1
Sato, S.2
Kotani, H.3
Tanaka, A.4
Asamizu, E.5
Nakamura, Y.6
Miyajima, N.7
Hirosawa, M.8
Sugiura, M.9
Sasamoto, S.10
Kimura, T.11
Hosouchi, T.12
Matsuno, A.13
Muraki, A.14
Nakazaki, N.15
Naruo, K.16
Okumura, S.17
Shimpo, S.18
Takeuchi, C.19
Wada, T.20
Watanabe, A.21
Yamada, M.22
Yasuda, M.23
Tabata, S.24
more..
-
202
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb, J-F., White, O., Kerlavage, A.R., Clayton, R.A., Sutton, G.G., Fleischmann, R.D., Ketchum, K.A., Klenk, H.P., Gill, S., Dougherty, B.A., Nelson, K., Quackenbush, J., Zhou, L., Kirkness, E.F., Peterson, S., Loftus, B., Richardson, D., Dodson, R., Khalak, H.G., Glodek, A., McKenney, K., Fitzegerald, L.M., Lee, N., Adams, M.D., Hickey, E.K., Berg, D.E., Gocayne, J.D., Utterback, T.R., Peterson, J.D., Kelley, J.M., Cotton, M.D., Weidman, J.M., Fujii, C., Bowman, C., Watthey, L., Wallin, E., Hayes, W.S., Borodovsky, M., Karp, P.D., Smith, H.O., Fraser, C.M. and Venter, J.C. (1997) The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388, 539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.-F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.6
Ketchum, K.A.7
Klenk, H.P.8
Gill, S.9
Dougherty, B.A.10
Nelson, K.11
Quackenbush, J.12
Zhou, L.13
Kirkness, E.F.14
Peterson, S.15
Loftus, B.16
Richardson, D.17
Dodson, R.18
Khalak, H.G.19
Glodek, A.20
McKenney, K.21
Fitzegerald, L.M.22
Lee, N.23
Adams, M.D.24
Hickey, E.K.25
Berg, D.E.26
Gocayne, J.D.27
Utterback, T.R.28
Peterson, J.D.29
Kelley, J.M.30
Cotton, M.D.31
Weidman, J.M.32
Fujii, C.33
Bowman, C.34
Watthey, L.35
Wallin, E.36
Hayes, W.S.37
Borodovsky, M.38
Karp, P.D.39
Smith, H.O.40
Fraser, C.M.41
Venter, J.C.42
more..
-
203
-
-
0031470826
-
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
-
Fraser, CM., Casjens, S., Huang, W.M., Sutton, G.G., Clayton, R., Lathigra, R., White, O., Ketchum, K.A., Dodson, R., Hickey, E.K., Gwinn, M., Dougherty, B., Tomb, J.F., Fleischmann, R.D., Richardson, D., Peterson, J., Kerlavage, A.R., Quackenbush, J., Salzberg, S., Hanson, M., van Vugt, R., Palmer, N., Adams, M.D., Gocayne, J. and Venter, J.C. (1997) Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi. Nature 390, 580-586.
-
(1997)
Nature
, vol.390
, pp. 580-586
-
-
Fraser, C.M.1
Casjens, S.2
Huang, W.M.3
Sutton, G.G.4
Clayton, R.5
Lathigra, R.6
White, O.7
Ketchum, K.A.8
Dodson, R.9
Hickey, E.K.10
Gwinn, M.11
Dougherty, B.12
Tomb, J.F.13
Fleischmann, R.D.14
Richardson, D.15
Peterson, J.16
Kerlavage, A.R.17
Quackenbush, J.18
Salzberg, S.19
Hanson, M.20
Van Vugt, R.21
Palmer, N.22
Adams, M.D.23
Gocayne, J.24
Venter, J.C.25
more..
-
204
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F.R., Plunkett, G., Bloch, C.A., Perna, N.T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J.D., Rode, C.K., Mayhew, G.F., Gregor, J., Davis, N.W., Kirkpatrick, H.A., Goeden, M.A., Rose, D.J., Mau, B. and Shao, Y. (1997) The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
Gregor, J.11
Davis, N.W.12
Kirkpatrick, H.A.13
Goeden, M.A.14
Rose, D.J.15
Mau, B.16
Shao, Y.17
-
205
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
206
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet, F. (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16, 10881-10890.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
|