-
1
-
-
0034721644
-
Protein diversity from alternative splicing: A challenge for bioinformatics and post-genome biology
-
Black, D. L. (2000) Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology. Cell 103, 367-370
-
(2000)
Cell
, vol.103
, pp. 367-370
-
-
Black, D.L.1
-
2
-
-
0033835333
-
Sorting out the complexity of SR protein functions
-
Graveley, B. R. (2000) Sorting out the complexity of SR protein functions. RNA 6, 1197-1211
-
(2000)
RNA
, vol.6
, pp. 1197-1211
-
-
Graveley, B.R.1
-
3
-
-
0029767662
-
SR proteins and splicing control
-
Manley, J. L. and Tacke, R. (1996) SR proteins and splicing control. Genes Dev. 10, 1569-1579
-
(1996)
Genes Dev.
, vol.10
, pp. 1569-1579
-
-
Manley, J.L.1
Tacke, R.2
-
4
-
-
0034256020
-
Alternative pre-mRNA splicing: The logic of combinatorial control
-
Smith, C. W. and Valcarcel, J. (2000) Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci. 25, 381-388
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 381-388
-
-
Smith, C.W.1
Valcarcel, J.2
-
5
-
-
0035025061
-
Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA
-
Huang, Y. and Steitz, J. A. (2001) Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA. Mol. Cell 7, 899-905
-
(2001)
Mol. Cell
, vol.7
, pp. 899-905
-
-
Huang, Y.1
Steitz, J.A.2
-
6
-
-
0036500149
-
Stability of a PKCl-1-related mRNA is controlled by the splicing factor ASF/SF2: A novel function for SR proteins
-
Lemaire, R., Prasad, J., Kashima, T., Gustafson, J., Manley, J. L. and Lafyatis, R. (2002) Stability of a PKCl-1-related mRNA is controlled by the splicing factor ASF/SF2: a novel function for SR proteins. Genes Dev. 16, 594-607
-
(2002)
Genes Dev.
, vol.16
, pp. 594-607
-
-
Lemaire, R.1
Prasad, J.2
Kashima, T.3
Gustafson, J.4
Manley, J.L.5
Lafyatis, R.6
-
7
-
-
0026716104
-
SR proteins: A conserved family of pre-mRNA splicing factors
-
Zahler, A. M., Lane, W. S., Stolk, J. A. and Roth, M. B. (1992) SR proteins: a conserved family of pre-mRNA splicing factors. Genes Dev. 6, 837-847
-
(1992)
Genes Dev.
, vol.6
, pp. 837-847
-
-
Zahler, A.M.1
Lane, W.S.2
Stolk, J.A.3
Roth, M.B.4
-
8
-
-
0031037690
-
Sequence-specific RNA binding by an SR protein requires RS domain phospharylation: Creation of an SRp40-specific splicing enhancer
-
Tacke, R., Chen, Y. and Manley, J. L. (1997) Sequence-specific RNA binding by an SR protein requires RS domain phospharylation: creation of an SRp40-specific splicing enhancer. Proc. Natl. Acad. Sci. U.S.A. 94, 1148-1153
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 1148-1153
-
-
Tacke, R.1
Chen, Y.2
Manley, J.L.3
-
9
-
-
0031042396
-
Phosphorylatian of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing
-
Xiao, S. H. and Manley, J. L. (1997) Phosphorylatian of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing. Genes Dev. 11, 334-344
-
(1997)
Genes Dev.
, vol.11
, pp. 334-344
-
-
Xiao, S.H.1
Manley, J.L.2
-
10
-
-
0032476604
-
Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2
-
Xiao, S. H. and Manley, J. L. (1998) Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2. EMBO J. 17, 6359-6367
-
(1998)
EMBO J.
, vol.17
, pp. 6359-6367
-
-
Xiao, S.H.1
Manley, J.L.2
-
11
-
-
0028043718
-
Regulation of mammalian spliceosome assembly by a protein phosphorylation mechanism
-
Mermoud, J. E., Cohen, P. T. and Lamond, A. I. (1994) Regulation of mammalian spliceosome assembly by a protein phosphorylation mechanism. EMBO J. 13, 5679-5688
-
(1994)
EMBO J.
, vol.13
, pp. 5679-5688
-
-
Mermoud, J.E.1
Cohen, P.T.2
Lamond, A.I.3
-
12
-
-
0027173356
-
Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing
-
Tazi, J., Karnstadt, U., Rossi, F., Jeanteur, P., Cathala, G., Brunel, C. and Luhrmann, R. (1993) Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing. Nature (London) 363, 283-286
-
(1993)
Nature (London)
, vol.363
, pp. 283-286
-
-
Tazi, J.1
Karnstadt, U.2
Rossi, F.3
Jeanteur, P.4
Cathala, G.5
Brunel, C.6
Luhrmann, R.7
-
13
-
-
0032827418
-
The protein kinase Clk/Sty directly modulates SR protein activity: Both hyper- and hypophosphorylation inhibit splicing
-
Prasad, J., Colwill, K., Pawson, T. and Manley, J. L. (1999) The protein kinase Clk/Sty directly modulates SR protein activity: both hyper- and hypophosphorylation inhibit splicing. Mol. Cell. Biol. 19, 6991-7000
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6991-7000
-
-
Prasad, J.1
Colwill, K.2
Pawson, T.3
Manley, J.L.4
-
14
-
-
0038401969
-
Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity
-
Caceres, J. F., Misteli, T., Creaton, G. R., Spector, D. L. and Krainer, A. R. (1997) Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity. J. Cell Biol. 138, 225-238
-
(1997)
J. Cell Biol.
, vol.138
, pp. 225-238
-
-
Caceres, J.F.1
Misteli, T.2
Creaton, G.R.3
Spector, D.L.4
Krainer, A.R.5
-
15
-
-
0028286596
-
A serine kinase regulates intracellular localization of splicing factors in the cell cycle
-
Gui, J. F., Lane, W. S. and Fu, X. D. (1994) A serine kinase regulates intracellular localization of splicing factors in the cell cycle. Nature (London) 369, 678-682
-
(1994)
Nature (London)
, vol.369
, pp. 678-682
-
-
Gui, J.F.1
Lane, W.S.2
Fu, X.D.3
-
16
-
-
0030028882
-
The Clk/Sty protein kinase phosphorylates SR splicing factors and regulates their intranuclear distribution
-
Colwill, K., Pawson, T., Andrews, B., Prasad, J., Manley, J. L., Bell, J. C. and Duncan, P. I. (1996) The Clk/Sty protein kinase phosphorylates SR splicing factors and regulates their intranuclear distribution. EMBO J. 15, 265-275
-
(1996)
EMBO J.
, vol.15
, pp. 265-275
-
-
Colwill, K.1
Pawson, T.2
Andrews, B.3
Prasad, J.4
Manley, J.L.5
Bell, J.C.6
Duncan, P.I.7
-
17
-
-
0029798802
-
Serine/threonine phosphatase 1 modulates the subnuclear distribution of pre-mRNA splicing factors
-
Misteli, T. and Spector, D. L. (1995) Serine/threonine phosphatase 1 modulates the subnuclear distribution of pre-mRNA splicing factors. Mol. Biol. Cell 7, 1559-1572
-
(1995)
Mol. Biol. Cell
, vol.7
, pp. 1559-1572
-
-
Misteli, T.1
Spector, D.L.2
-
18
-
-
0033926038
-
Compartmentalization of RNA processing factors within nuclear speckles
-
Mintz, P. J. and Spector, D. L. (2000) Compartmentalization of RNA processing factors within nuclear speckles. J. Struct. Biol. 129, 241-251
-
(2000)
J. Struct. Biol.
, vol.129
, pp. 241-251
-
-
Mintz, P.J.1
Spector, D.L.2
-
19
-
-
0033151758
-
Nuclear organization of pre-mRNA splicing factors
-
Sleeman, J. E. and Lamond, A. I. (1999) Nuclear organization of pre-mRNA splicing factors. Curr. Opin. Cell Biol. 11, 372-377
-
(1999)
Curr. Opin. Cell Biol.
, vol.11
, pp. 372-377
-
-
Sleeman, J.E.1
Lamond, A.I.2
-
20
-
-
0032559642
-
SRPK2: A differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells
-
Wang, H. Y., Lin, W., Dyck, J. A., Yeakley, J. M., Songyang, Z., Cantley, L. C. and Fu, X. D. (1998) SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells. J. Cell Biol. 140, 737-750
-
(1998)
J. Cell Biol.
, vol.140
, pp. 737-750
-
-
Wang, H.Y.1
Lin, W.2
Dyck, J.A.3
Yeakley, J.M.4
Songyang, Z.5
Cantley, L.C.6
Fu, X.D.7
-
21
-
-
0030778935
-
Characterization and comparison of four serine- and arginine-rich (SR) protein kinases
-
Nayler, O., Stamm, S. and Ullrich, A. (1997) Characterization and comparison of four serine- and arginine-rich (SR) protein kinases. Biochem. J. 326, 593-700
-
(1997)
Biochem. J.
, vol.326
, pp. 593-700
-
-
Nayler, O.1
Stamm, S.2
Ullrich, A.3
-
22
-
-
0029744344
-
SRPK1 and Clk/Sty protein kinases show distinct substrate specificities for serine/arginine-rich splicing factors
-
Colwill, K., Feng, L. L., Yeakley, J. M., Gish, G. D., Caceres, J. F., Pawson, T. and Fu, X. D. (1996) SRPK1 and Clk/Sty protein kinases show distinct substrate specificities for serine/arginine-rich splicing factors. J. Biol. Chem. 271, 2469-2475
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 2469-2475
-
-
Colwill, K.1
Feng, L.L.2
Yeakley, J.M.3
Gish, G.D.4
Caceres, J.F.5
Pawson, T.6
Fu, X.D.7
-
23
-
-
0026731973
-
Ser/Thr-specific protein phosphatases are required for both catalytic steps of pre-mRNA splicing
-
992
-
Mermoud, J. E., Cohen, P. and Lamond, A. I. (992) Ser/Thr-specific protein phosphatases are required for both catalytic steps of pre-mRNA splicing. Nucleic Acids Res. 20, 5263-5269
-
Nucleic Acids Res.
, vol.20
, pp. 5263-5269
-
-
Mermoud, J.E.1
Cohen, P.2
Lamond, A.I.3
-
24
-
-
0032901297
-
The type 2C Ser/Thr phosphatase PP2Cgamma is a pre-mRNA splicing factor
-
Murray, M. V., Kabayashi, R. and Krainer, A. R. (1999) The type 2C Ser/Thr phosphatase PP2Cgamma is a pre-mRNA splicing factor. Genes Dev. 13, 87-97
-
(1999)
Genes Dev.
, vol.13
, pp. 87-97
-
-
Murray, M.V.1
Kabayashi, R.2
Krainer, A.R.3
-
25
-
-
0035977067
-
FAS activation induces dephosphorylation of SR proteins; dependence on the de novo generation of ceramide and activation of protein phosphatase 1
-
Chalfant, C. E., Ogretmen, B., Galadari, S., Kroesen, B. J., Pettus, B. J. and Hannun, Y. A. (2001) FAS activation induces dephosphorylation of SR proteins; dependence on the de novo generation of ceramide and activation of protein phosphatase 1. J. Biol. Chem. 276, 44848-44855
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 44848-44855
-
-
Chalfant, C.E.1
Ogretmen, B.2
Galadari, S.3
Kroesen, B.J.4
Pettus, B.J.5
Hannun, Y.A.6
-
26
-
-
0037066727
-
De novo ceramide regulates the alternative splicing of caspase 9 and Bcl-x in A549 lung adenocarcinoma cells. Dependence on protein phosphatase-1
-
Chalfant, C. E., Rathman, K., Pinkerman, R. L., Wood, R. E., Obeid, L. M., Ogretmen, B. and Hannun, Y. A. (2002) De novo ceramide regulates the alternative splicing of caspase 9 and Bcl-x in A549 lung adenocarcinoma cells. Dependence on protein phosphatase-1. J. Biol. Chem. 277, 12587-12595
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 12587-12595
-
-
Chalfant, C.E.1
Rathman, K.2
Pinkerman, R.L.3
Wood, R.E.4
Obeid, L.M.5
Ogretmen, B.6
Hannun, Y.A.7
-
27
-
-
0036848091
-
The SR protein SRp38 represses splicing in M phase cells
-
Shin, C. and Manley, J. L. (2002) The SR protein SRp38 represses splicing in M phase cells. Cell 111, 407-417
-
(2002)
Cell
, vol.111
, pp. 407-417
-
-
Shin, C.1
Manley, J.L.2
-
28
-
-
0032516168
-
Regulation of adenovirus alternative RNA splicing by dephosphorylation of SR proteins
-
Kanopka, A., Muhlemann, O., Petersen-Mahrt, S., Estmer, C., Ohrmalm, C. and Akusjarvi, G. (1998) Regulation of adenovirus alternative RNA splicing by dephosphorylation of SR proteins. Nature (London) 393, 185-187
-
(1998)
Nature (London)
, vol.393
, pp. 185-187
-
-
Kanopka, A.1
Muhlemann, O.2
Petersen-Mahrt, S.3
Estmer, C.4
Ohrmalm, C.5
Akusjarvi, G.6
-
29
-
-
0035964316
-
Regulation of SR protein localization during development
-
Sanford, J. R. and Bruzik, J. P. (1999) Regulation of SR protein localization during development. Proc. Natl. Acad. Sci. U.S.A. 98, 10184-10189
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 10184-10189
-
-
Sanford, J.R.1
Bruzik, J.P.2
-
30
-
-
0028831527
-
Identification and characterization of three members of the human SR family of pre-mRNA splicing factors
-
Screaton, G. R., Caceres, J. F., Mayeda, A., Bell, M. V., Plebanski, M., Jackson, D. G., Bell, J. C. and Krainer, A. R. (1995) identification and characterization of three members of the human SR family of pre-mRNA splicing factors. EMBO J. 14, 4336-4349
-
(1995)
EMBO J.
, vol.14
, pp. 4336-4349
-
-
Screaton, G.R.1
Caceres, J.F.2
Mayeda, A.3
Bell, M.V.4
Plebanski, M.5
Jackson, D.G.6
Bell, J.C.7
Krainer, A.R.8
-
31
-
-
0039550795
-
A human papillomavirus E2 transcriptional activator. The interactions with cellular splicing factors and potential function in pre-mRNA processing
-
Lai, M. C., Teh, B. H. and Tarn, W. Y. (1999) A human papillomavirus E2 transcriptional activator. The interactions with cellular splicing factors and potential function in pre-mRNA processing. J. Biol. Chem. 274, 11832-11841
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 11832-11841
-
-
Lai, M.C.1
Teh, B.H.2
Tarn, W.Y.3
-
32
-
-
0030959371
-
Distribution of pre-mRNA splicing factors at sites of RNA polymerase II transcription
-
Neugebauer, K. M. and Roth, M. B. (1997) Distribution of pre-mRNA splicing factors at sites of RNA polymerase II transcription. Genes Dev. 11, 1148-1159
-
(1997)
Genes Dev.
, vol.11
, pp. 1148-1159
-
-
Neugebauer, K.M.1
Roth, M.B.2
-
33
-
-
0028242341
-
Inhibitors of transcription such as 5,6-dichloro-1-β-D-ribofuranosylbenzimidazole and isoquinoline sulfonamide derivatives (H-8 and H-7) promote dephosphorylation of the carboxyl-terminal domain of RNA polymerase II largest subunit
-
Dubois, M. F., Nguyen, V. T., Bellier, S. and Bensaude, O. (1994) Inhibitors of transcription such as 5,6-dichloro-1-β-D-ribofuranosylbenzimidazole and isoquinoline sulfonamide derivatives (H-8 and H-7) promote dephosphorylation of the carboxyl-terminal domain of RNA polymerase II largest subunit. J. Biol. Chem. 269, 13331-13336
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 13331-13336
-
-
Dubois, M.F.1
Nguyen, V.T.2
Bellier, S.3
Bensaude, O.4
-
34
-
-
0027305616
-
Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus
-
Wansink, D. G., Schul, W., van der Kraan, I., van Steensel, B., van Driel, R. and de Jong, L. (1993) Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus. J. Cell Biol. 122, 283-293
-
(1993)
J. Cell Biol.
, vol.122
, pp. 283-293
-
-
Wansink, D.G.1
Schul, W.2
Van Der Kraan, I.3
Van Steensel, B.4
Van Driel, R.5
De Jong, L.6
-
35
-
-
0028600629
-
Localization of pre-mRNA splicing in mammalian nuclei
-
Zhang, G., Taneja, K. L., Singer, R. H. and Green, M. R. (1994) Localization of pre-mRNA splicing in mammalian nuclei. Nature (London) 372, 809-812
-
(1994)
Nature (London)
, vol.372
, pp. 809-812
-
-
Zhang, G.1
Taneja, K.L.2
Singer, R.H.3
Green, M.R.4
-
36
-
-
0029615378
-
Nonrandom gene organization: Structural arrangements of specific pre-mRNA transcription and splicing with SC-35 domains
-
Xing, Y., Johnson, C. V., Moen, Jr, P. T., McNeil, J. A. and Lawrence, J. (1995) Nonrandom gene organization: structural arrangements of specific pre-mRNA transcription and splicing with SC-35 domains. J. Cell Biol. 131, 1635-1647
-
(1995)
J. Cell Biol.
, vol.131
, pp. 1635-1647
-
-
Xing, Y.1
Johnson, C.V.2
Moen P.T., Jr.3
McNeil, J.A.4
Lawrence, J.5
-
37
-
-
1842376906
-
The dynamics of a pre-mRNA splicing factor in living cells
-
Misteli, T., Caceres, J. F. and Spector, D. L. (1997) The dynamics of a pre-mRNA splicing factor in living cells. Nature (London) 387, 523-527
-
(1997)
Nature (London)
, vol.387
, pp. 523-527
-
-
Misteli, T.1
Caceres, J.F.2
Spector, D.L.3
-
38
-
-
0032547829
-
Serine phosphorylation of SR proteins is required for their recruitment to sites of transcription in vivo
-
Misteli, T., Caceres, J. F., Clement, J. Q., Krainer, A. R., Wilkinson, M. F. and Spector, D. L. (1998) Serine phosphorylation of SR proteins is required for their recruitment to sites of transcription in vivo. J. Cell Biol. 143, 297-307
-
(1998)
J. Cell Biol.
, vol.143
, pp. 297-307
-
-
Misteli, T.1
Caceres, J.F.2
Clement, J.Q.3
Krainer, A.R.4
Wilkinson, M.F.5
Spector, D.L.6
-
39
-
-
0023000520
-
Casein kinase type II is involved in the inhibition by 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole of specific RNA polymerase II transcription
-
Zandomeni, R., Zandomeni, M. C., Shugar, D. and Weinmann, R. (1986) Casein kinase type II is involved in the inhibition by 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole of specific RNA polymerase II transcription. J. Biol. Chem. 261, 3414-3419
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 3414-3419
-
-
Zandomeni, R.1
Zandomeni, M.C.2
Shugar, D.3
Weinmann, R.4
-
40
-
-
0033553532
-
Substrate targeting in the ubiquitin system
-
Laney, J. D. and Hochstrasserr, M. (1999) Substrate targeting in the ubiquitin system. Cell 97, 427-430
-
(1999)
Cell
, vol.97
, pp. 427-430
-
-
Laney, J.D.1
Hochstrasserr, M.2
-
41
-
-
0033575255
-
Suicidal tendencies: Apoptotic cell death by caspase family proteinases
-
Wolf, B. B. and Green, D. R. (1999) Suicidal tendencies: apoptotic cell death by caspase family proteinases. J. Biol. Chem. 274, 20049-20052
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 20049-20052
-
-
Wolf, B.B.1
Green, D.R.2
-
42
-
-
0028046121
-
The SR protein B52/SRp55 is essential for Drosophila development
-
Ring, H. Z. and Lis, J. T. (1994)The SR protein B52/SRp55 is essential for Drosophila development. Mol. Cell. Biol. 14, 7499-7506
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 7499-7506
-
-
Ring, H.Z.1
Lis, J.T.2
-
43
-
-
0037131389
-
"Stemness": Transcriptional profiling of embryonic and adult stem cells
-
Ramalho-Santos, M., Yoon, S., Matsuzaki, Y., Mulligan, R. C. and Melton, D. A. (2002) "Stemness": transcriptional profiling of embryonic and adult stem cells. Science 298, 597-600
-
(2002)
Science
, vol.298
, pp. 597-600
-
-
Ramalho-Santos, M.1
Yoon, S.2
Matsuzaki, Y.3
Mulligan, R.C.4
Melton, D.A.5
|