Arabidopsis MSI1 is required for epigenetic maintenance of reproductive development

Development

Volumn 130, Issue 12, 2003, Pages 2555-2565

  Hennig, Lars ^a   Taranto, Patti ^b   Walser, Marcel ^a   Schönrock, Nicole ^a   Gruissem, Wilhelm ^a,b  

^a ETH ZURICH   (Switzerland)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

AGAMOUS; Arabidopsis thaliana; Chromatin; Meristem; MSI1; Ovule; RbAp48

Indexed keywords

ARABIDOPSIS AGAMOUS PROTEIN; ARABIDOPSIS PROTEIN; DNA BINDING PROTEIN; FAS ANTIGEN; HOMEODOMAIN PROTEIN; HYBRID PROTEIN; REPETITIVE DNA; MESSENGER RNA; MSI1 PROTEIN, ARABIDOPSIS;

APICAL MERISTEM; ARABIDOPSIS; CENTROMERE; CHROMATIN STRUCTURE; CONTROLLED STUDY; DNA METHYLATION; EUKARYOTE; FEMALE STERILITY; FLOWERING; GENE REPRESSION; HETEROCHROMATIN; MORPHOLOGY; NONHUMAN; OVARY DEVELOPMENT; PETAL; PHENOTYPE; PLANT DEVELOPMENT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DETERMINATION; PROTEIN EXPRESSION; PROTEIN FUNCTION; REVIEW; SHOOT GROWTH; STAMEN; ARTICLE; BIOLOGY; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PHYLOGENY; PHYSIOLOGY; PLANT LEAF; PRENATAL DEVELOPMENT; RNA INTERFERENCE;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; EUKARYOTA; SPERMATOPHYTA;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; COMPUTATIONAL BIOLOGY; FLOWERING TOPS; GENE EXPRESSION REGULATION, PLANT; HETEROCHROMATIN; PHYLOGENY; PLANT LEAVES; RNA INTERFERENCE; RNA, MESSENGER;

EID: 0037604034     PISSN: 09501991     EISSN: None     Source Type: Journal    
DOI: 10.1242/dev.00470     Document Type: Review

References (61)

1. Ach, R. A., Taranto, P. and Gruissem, W. (1997). A conserved family of WD-40 proteins binds to the retinoblastoma protein in both plants and animals. Plant Cell 9, 1595-1606.
2. Alonso-Blanco, C. and Koornneef, M. (2000). Naturally occurring variation in Arabidopsis: an underexploited resource for plant genetics. Trends Plant Sci. 5, 22-29.
3. The Arabidopsis Genome Initiative (2000). Analysis of the genome sequence of the flowering, plant Arabidopsis thaliana. Nature 408, 796-815.
4. Bouché, N., Scharlat, A., Snedden, W., Bouchez, D. and Fromm, H. (2002). A novel family of calmodulin-binding transcription activators in multicellular organisms. J. Biol. Chem. 277, 21851-21861.
5. Bowman, J. L., Smyth, D. R. and Meyerowitz, E. M. (1991). Genetic interactions among, floral homeotic genes of Arabidopsis. Development 112, 1-20.
6. Bulger, M., Ito, T., Kamakaka, R. T. and Kadonaga, J. T. (1995). Assembly of regularly spaced nucleosome arrays by Drosophila chromatin assembly factor 1 and a 56-kDa histone-binding protein. Proc. Natl. Acad. Sci. USA 92, 11726-11730.
7. Czermin, B., Melti, R., McCabe, D., Seitz, V., Imhof, A. and Pirrotta, V. (2002). Drosophila Enhancer of Zeste/ESC Complexes Have a Historic H3 Methyltransferase Activity that Marks Chromosomal Polycomb Sites. Cell 111, 185-196.
8. Chaudhury, A. M., Ming, L., Miller, C., Craig, S., Dennis, E. S. and Peacock, W. J. (1997). Fertilization-independent seed development in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 94, 4223-4228.
9. Clough, S. J. and Bent, A. F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743.
10. Conner, J. and Liu, Z. (2000). LEUNIG, a putative transcriptional corepressor that regulates AGAMOUS expression during flower development. Proc. Natl. Acad. Sci. USA 97, 12902-12907.
11. Fransz, P., De Jong, J. H., Lysak, M., Castiglione, M. R. and Schubert, I. (2002). Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate. Proc. Natl. Acad. Sci. USA 99, 14584-14589.
12. Finnegan, E. J., Peacock, W. J. and Dennis, E. S. (1996). Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development. Proc. Natl. Acad. Sci. USA 93, 8449-8454.
13. Gaiser, J. C., Robinson-Beers, K. and Gasser, C. S. (1995). The Arabidopsis SUPERMAN gene mediates asymmetric growth of the outer integument of ovules. Plant Cell 7, 333-345.
14. Gaudin, V., Libault, M., Pouteau, S., Juul, T., Zhao, G., Lefebvre, D. and Grandjean, O. (2001). Mutations in LIKE HETEROCHROMATIN PROTEIN 1 affect flowering time and plant architecture in Arabidopsis. Development 128, 4847-4858.
15. Goodrich, J., Puangsomlee, P., Martin, M., Long, D., Meyerowitz, E. M. and Coupland, G. (1997). A Polycomb-group gene regulates homeotic gene expression in Arabidopsis. Nature 386, 44-51.
16. Groß-Hardt, R., Lenhard, M. and Laux, T. (2002). WUSCHEL signaling functions in interregional communication during Arabidopsis ovule development. Genes Dev. 16, 1129-1138.
17. Grossniklaus, U. and Schneitz, K. (1998). The molecular and genetic basis of ovule and megagametophyte development. Semin. Cell. Dev. Biol. 9, 227-238.
18. Grossniklaus, U., Vielle-Calzada, J. P., Hoeppner, M. A. and Gagliano, W. B. (1998). Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis. Science 280, 446-450.
19. Habu, Y., Kakutani, T. and Paszkowski, J. (2001). Epigenetic developmental mechanisms in plants: molecules and targets of plant epigenetic regulation. Curr Opin. Genet. Dev. 11, 215-220.
20. Jacobsen, S. E., Sakai, H., Finnegan, E. J., Cao, X. and Meyerowitz, E. M. (2000). Ectopic hypermethylation of flower-specific genes in Arabidopsis. Curr. Biol. 10, 179-186.
21. Jofuku, K. D., den Boer, B. G., van Montagu, M. and Okamuro, J. K. (1994). Control of Arabidopsis flower and seed development by the homeotic gene APETALA2. Plant Cell 6, 1211-1225.
22. Kaufman, P. D., Kobayashi, R. and Stillman, B. (1997). Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-1. Genes Dev. 11, 345-357.
23. Kaya, H., Shibahara, K., Taoka, K., Iwabuchi, M., Stillman, B. and Araki, T. (2001). FASCIATA genes for chromatin assembly factor-1 in Arabidopsis maintain the cellular organization of apical meristems. Cell 104, 131-142.
24. Kenzior, A. L. and Folk, W. R. (1998). AtMS14 and RbAp48 WD-40 repeat proteins bind metal ions. FEBS Lett. 440, 425-429.
25. Koncz, C. and Schell, J. (1986). The promoter of TL-DNA gene 5 controls the tissue specific expression of chimaeric genes carried by a novel type of Agrobacterium binary vector. Mol. Gen. Genet. 204, 383-396.
26. Leyser, H. M. O. and Furner, I. J. (1992). Characterisation of three shoot apical meristem mutants of Arabidopsis thaliana. Development 116, 397-403.
27. Lu, X. W. and Horvitz, H. R. (1998). lin-35 and lin-53, two genes that antagonize a C. elegans Ras pathway, encode proteins similar to Rb and its binding protein RbAp48. Cell 95, 981-991.
28. Maluszynska, J. and Heslop-Harrison, J. S. (1991). Localisation of tandemly repeated DNA sequences in Arabidopsis thaliana. Plant J. 1, 159-166.
29. Martinez-Balbas, M. A., Tsukiyama, T., Gdula, D. and Wu, C. (1998). Drosophila NURF-55, a WD repeat protein involved in histone metabolism. Proc. Natl. Acad. Sci. USA 95, 132-137.
30. Matzke, M. A. and Matzke, A. J. M. (1995). How and why do plants inactivate homologous (trans)genes? Plant Physiol. 107, 679-685.
31. Meyerowitz, E. M. (2002). Plants compared to animals: the broadest comparative study of development. Science 295, 1482-1485.
32. Muller, C. and Leutz, A. (2001). Chromatin remodeling in development and differentiation. Curr. Opin. Genet. Dev. 11, 167-174.
33. Narlikar, G. J., Fan, H. Y. and Kingston, R. E. (2002). Cooperation between complexes that regulate chromatin structure and transcription. Cell 108, 475-487.
34. NASC On-Line Catalogue. Internet WWW page at http://nasc.nott.ac.uk/home.html.
35. Okamuro, J. K., Caster, B., Villarroel, R., van Montagu, M. and Jofuku, K. D. (1997). The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis. Proc. Natl. Acad. Sci. USA 94, 7076-7081.
36. Page, R. D. (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12, 357-358.
37. Parthun, M. R., Widom, J. and Gottschling, D. E. (1996). The major cytoplasmic histone acetyltransferase in yeast: links to chromatin replication and histone metabolism. Cell 87, 85-94.
38. Qian, Y. W., Wang, Y. C., Hollingsworth, R. E., Jr, Jones, D., Ling, N. and Lee, E. Y. (1993). A retinoblastoma-binding protein related to a negative regulator of Ras in yeast. Nature 364, 648-652.
39. Quivy, J. P., Grandi, P. and Almouzni, G. (2001). Dimerization of the largest subunit of chromatin assembly factor 1: importance in vitro and during Xenopus early development. EMBO J. 20, 2015-2027.
40. Ray, A., Robinson-Beers, K., Ray, S., Baker, S. C., Lang, J. D., Preuss, D., Milligan, S. B. and Gasser, C. S. (1994). A rabidopsis floral homeotic gene BELL (BEL1) controls ovule development through negative regulation of AGAMOUS gene (AG). Proc. Natl. Acad. Sci. USA 91, 5761-5765.
41. Reinholz, E. (1966). Radiation induced mutants showing changed inflorescence characteristics. Arabid. Inf. Serv. 3, 19-20.
42. Reyes, J. C., Hennig, L. and Gruissem, W. (2002). Chromatin remodeling and memory factors - new regulators of plant development. Plant Physiol. 130, 1090-1101.
43. Ross, K., Fransz, P. F. and Jones, G. H. (1996). A light microscopic atlas of meiosis in Arabidopsis thaliana. Chromosome Res. 4, 507-516.
44. Rossi, V., Varotto, S., Locatelli, S., Lanzanova, C., Lauria, M., Zanotti, E., Hartings, H. and Motto, M. (2001). The maize WD-repeat gene ZmRbAp1 encodes a member of the MSI/RbAp sub-family and is differentially expressed during endosperm development. Mol. Genet. Genomics, 265, 576-584.
45. Schneitz, K. (1999). The molecular and genetic control of ovule development. Curr. Opin. Plant. Biol. 2, 13-17.
46. Sieburth, L. E. and Meverowitz, E. M. (1997). Molecular dissection of the AGAMOUS control region shows that cis elements for spatial regulation are located intragenically. Plant Cell 9, 355-365.
47. Smith, S. and Stillman, B. (1989). Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro. Cell 58, 15-25.
48. Soppe, W. J., Jasencakova, Z., Houben, A., Kakutani, T., Meister, A., Huang, M. S., Jacobsen, S. E., Schubert, I. and Fransz, P. F. (2002). DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis. EMBO J. 21, 6549-6559.
49. Taunton, J., Hassig, C. A. and Schreiber, S. L. (1996). A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p. Science 272, 408-411.
50. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. and Higgins, D. G. (1997). The CLUSTALwindows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
51. Tian, L. and Chen, Z. J. (2001). Blocking histone deacetylation in Arabidopsis induces pleiotropic effects on plant gene regulation and development. Proc. Natl. Acad. Sci. USA 98, 200-205.
52. Tie, F., Furuyama, T., Prasad-Sinha, J., Jane, E. and Harte, P. J. (2001). The Drosophila Polycomb group proteins ESC and E(Z) are present in a complex containing the histone-binding protein p55 and the histone deacetylase RPD3. Development 128, 275-286.
53. Tyler, J. K., Bulger, M., Kamakaka, R. T., Kobayashi, R. and Kadonaga, J. T. (1996). The p55 subunit of Drosophila chromatin assembly factor 1 is homologous to a histone deacetylase-associated protein. Mol. Cell. Biol. 16, 6149-6159.
54. Verbsky, M. L. and Richards, E. J. (2001). Chromatin remodeling in plants. Curr. Opin. Plant Biol. 4, 494-500.
55. Verreault, A., Kaufman, P. D., Kobayashi, R. and Stillman, B. (1996). Nucleosome assembly by a complex of CAF-1 and acetylated histones H3/H4. Cell 87, 95-104.
56. Verreault, A., Kaufman, P. D., Kobayashi, R. and Stillman, B. (1998). Nucleosomal DNA regulates the core-histone-binding subunit of the human Hatl acetyltransferase. Curr Biol. 8, 96-108.
57. Wagner, D. and Meyerowitz, E. M. (2002). SPLAYED, a Novel SWI/SNF ATPase homolog, controls reproductive development in Arabidopsis. Curr. Biol. 12, 85-94.
58. Western, T. L. and Haughn, G. W. (1999). BELL1 and AGAMOUS genes promote ovule identity in Arabidopsis thaliana. Plant J. 18, 329-336.
59. Wu, K., Malik, K., Tian, L., Brown, D. and Miki, B. (2000). Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana. Plant. Mol. Biol. 44, 167-176.
60. Yoshida, N., Yanai, Y., Chen, L., Kato, Y., Hiratsuka, J., Miwa, T., Sung, Z. R. and Takahashi, S. (2001). EMBRYONIC FLOWER2, a novel polycomb group protein homolog, mediates shoot development and flowering in Arabidopsis. Plant Cell 13, 2471-2481.
61. Zhu, X., Demolis, N., Jacquet, M. and Michaeli, T. (2000). MSI1 suppresses hyperactive RAS via the cAMP-dependent protein kinase and independently of chromatin assembly factor-1. Curr. Genet. 38, 60-70.