-
1
-
-
0035438386
-
Toward an optimal procedure for variable selection and QSAR model building
-
Yasri, A.; Hartsough, D. Toward an Optimal Procedure for Variable Selection and QSAR Model Building. J. Chem. Inf. Comput. Sci. 2001, 41, 1218-1227.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 1218-1227
-
-
Yasri, A.1
Hartsough, D.2
-
2
-
-
0034597582
-
2D QSAR modeling and preliminary database searching for dopamine transporter inhibitors using genetic algorithm variable selection of Molconn Z descriptors
-
Huffman, B. T.; Kopajtic, T.; Katz, J. L.; Newman, A. H. 2D QSAR Modeling and Preliminary Database Searching for Dopamine Transporter Inhibitors Using Genetic Algorithm Variable Selection of Molconn Z Descriptors. J. Med. Chem. 2000, 43, 4151-4159.
-
(2000)
J. Med. Chem.
, vol.43
, pp. 4151-4159
-
-
Huffman, B.T.1
Kopajtic, T.2
Katz, J.L.3
Newman, A.H.4
-
3
-
-
0039700206
-
Identification of a preferred set of molecular descriptors for compound classification based on principal component analysis
-
Xue, L.; Godden, J.; Gao, H.; Bajorath, J. Identification of a Preferred Set of Molecular Descriptors for Compound Classification Based on Principal Component Analysis. J. Chem. Inf. Comput. Sci. 1999, 39, 669-704.
-
(1999)
J. Chem. Inf. Comput. Sci.
, vol.39
, pp. 669-704
-
-
Xue, L.1
Godden, J.2
Gao, H.3
Bajorath, J.4
-
4
-
-
0034181655
-
Molecular descriptors for effective classification of biologically active compounds based on principal component analysis identified by a genetic algorithm
-
Xue, L.; Bajorath, J. Molecular Descriptors for Effective Classification of Biologically Active Compounds Based on Principal Component Analysis Identified by a Genetic Algorithm. J. Chem. Inf. Comput. Sci. 2000, 40, 801-809.
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, pp. 801-809
-
-
Xue, L.1
Bajorath, J.2
-
5
-
-
0002483594
-
Multivariate regression outperforms several robust architectures of neural networks in QSAR modeling
-
Luçić, B.; Trinajstic, N. Multivariate Regression Outperforms Several Robust Architectures of Neural Networks in QSAR Modeling. J. Chem. Inf. Comput. Sci. 2001, 41, 121-132.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 121-132
-
-
Luçić, B.1
Trinajstic, N.2
-
6
-
-
0342645323
-
Use of structure-activity data to compare structure-based clustering methods and descriptors for use in compound selection
-
Brown, R. D.; Martin, Y. C. Use of Structure-Activity Data To Compare Structure-Based Clustering Methods and Descriptors for Use in Compound Selection. J. Chem. Inf. Comput. Sci. 1996, 36, 572-584.
-
(1996)
J. Chem. Inf. Comput. Sci.
, vol.36
, pp. 572-584
-
-
Brown, R.D.1
Martin, Y.C.2
-
7
-
-
0029783934
-
Neighborhood behavior: A Useful concept for validation of molecular diversity descriptors
-
Patterson, D. E.; Cramer, R. D.; Ferguson, A. M.; Clark, R. D.; Weinberger, L. E. Neighborhood Behavior: A Useful Concept for Validation of Molecular Diversity Descriptors. J. Med. Chem. 1996, 39, 3049-3059.
-
(1996)
J. Med. Chem.
, vol.39
, pp. 3049-3059
-
-
Patterson, D.E.1
Cramer, R.D.2
Ferguson, A.M.3
Clark, R.D.4
Weinberger, L.E.5
-
8
-
-
0032234687
-
Advances in diversity profiling and combinatorial series design
-
Agrafiotis, D. K.; Myslik, J. C.; Salemme, F. R. Advances in diversity profiling and combinatorial series design. Molecular Diversity 1999, 4, 1-22.
-
(1999)
Molecular Diversity
, vol.4
, pp. 1-22
-
-
Agrafiotis, D.K.1
Myslik, J.C.2
Salemme, F.R.3
-
9
-
-
0030815955
-
Designing combinatorial library mixtures using a genetic algorithm
-
Brown, R. D.; Martin, Y. C. Designing Combinatorial Library Mixtures Using a Genetic Algorithm. J. Med. Chem. 1997, 40, 2304-2313.
-
(1997)
J. Med. Chem.
, vol.40
, pp. 2304-2313
-
-
Brown, R.D.1
Martin, Y.C.2
-
10
-
-
0000892020
-
Clustering of large databases of compounds: Using the MDL keys as structural descriptors
-
McGregor, M. J.; Pallai, P. V. Clustering of Large Databases of Compounds: Using the MDL Keys as Structural Descriptors. J. Chem. Inf. Comput. Sci. 1997, 37, 443-448.
-
(1997)
J. Chem. Inf. Comput. Sci.
, vol.37
, pp. 443-448
-
-
McGregor, M.J.1
Pallai, P.V.2
-
11
-
-
0030943408
-
Selecting optimally diverse compounds from structure databases: A validation study of two-dimensional and three-dimensional molecular descriptors
-
Matter, H. Selecting Optimally Diverse Compounds from Structure Databases: A Validation Study of Two-Dimensional and Three-Dimensional Molecular Descriptors. J. Med. Chem. 1997, 40, 1219-1229.
-
(1997)
J. Med. Chem.
, vol.40
, pp. 1219-1229
-
-
Matter, H.1
-
12
-
-
0001027028
-
Comparing 3D pharmacophore triplets and 2D fingerprints for selecting diverse compound subsets
-
Matter, H.; Pötter, T. Comparing 3D Pharmacophore Triplets and 2D Fingerprints for Selecting Diverse Compound Subsets. J. Chem. Inf. Comput. Sci. 1999, 39, 1211-1225.
-
(1999)
J. Chem. Inf. Comput. Sci.
, vol.39
, pp. 1211-1225
-
-
Matter, H.1
Pötter, T.2
-
13
-
-
0033217466
-
Analysis of a large structure/biological activity data set using recursive partitioning
-
Rusinko, A.; Farmen, M. W.; Lambert, C. G.; Brown, P. L.; Young, S. S. Analysis of a Large Structure/Biological Activity Data Set Using Recursive Partitioning. J. Chem. Inf. Comput. Sci. 1999, 39, 1017-1026.
-
(1999)
J. Chem. Inf. Comput. Sci.
, vol.39
, pp. 1017-1026
-
-
Rusinko, A.1
Farmen, M.W.2
Lambert, C.G.3
Brown, P.L.4
Young, S.S.5
-
15
-
-
0018927965
-
Water solubility and octanol/water partition coeffcients of organics. Limitations of the solubility-partition coeffcient correlation
-
Banerjee, S.; Yalkowsky, S. H.; Valvani, S. C. Water Solubility and Octanol/Water Partition Coeffcients of Organics. Limitations of the Solubility-Partition Coeffcient Correlation. Environ. Sci. Technol. 1980, 14, 1227-1229.
-
(1980)
Environ. Sci. Technol.
, vol.14
, pp. 1227-1229
-
-
Banerjee, S.1
Yalkowsky, S.H.2
Valvani, S.C.3
-
18
-
-
0001645890
-
Estimation of aqueous solubility for a diverse set of organic compounds based on molecular topology
-
Huuskonen, J. Estimation of Aqueous Solubility for a Diverse Set of Organic Compounds Based on Molecular Topology. J. Chem. Inf. Comput. Sci. 2000, 40, 773-777.
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, pp. 773-777
-
-
Huuskonen, J.1
-
19
-
-
0032061266
-
Aqueous solubility prediction of drugs based on molecular topology and neural network modeling
-
Huuskonen, J.; Salo, M.; Taskinen, J. Aqueous Solubility Prediction of Drugs Based on Molecular Topology and Neural Network Modeling. J. Chem. Inf. Comput. Sci. 1998, 38, 450-456.
-
(1998)
J. Chem. Inf. Comput. Sci.
, vol.38
, pp. 450-456
-
-
Huuskonen, J.1
Salo, M.2
Taskinen, J.3
-
20
-
-
0035526162
-
Estimation of aqueous solubility of chemical compounds using e-state indices
-
Tetko, I. V.; Tanchuk, V. Y.; Kasheva, T. N.; Villa, A. E. P. Estimation of Aqueous Solubility of Chemical Compounds Using E-State Indices. J. Chem. Inf. Comput. Sci. 2001, 41, 1488-1493.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 1488-1493
-
-
Tetko, I.V.1
Tanchuk, V.Y.2
Kasheva, T.N.3
Villa, A.E.P.4
-
21
-
-
0037361981
-
Prediction of aqueous solubility of organic compounds based on a 3D structure representation
-
Yan, A.; Gasteiger, J. Prediction of Aqueous Solubility of Organic Compounds Based on a 3D Structure Representation. J. Chem. Inf. Comput. Sci. 2003, 43, 429-434.
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 429-434
-
-
Yan, A.1
Gasteiger, J.2
-
22
-
-
0035498340
-
Development of quantitative structure - Property relationship models for early ADME evaluation in drug discovery. 1. Aqueous solubility
-
Liu, R.; So, S. S. Development of Quantitative Structure - Property Relationship Models for Early ADME Evaluation in Drug Discovery. 1. Aqueous Solubility, J. Chem. Inf. Comput. Sci. 2001, 41, 1633-1639.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 1633-1639
-
-
Liu, R.1
So, S.S.2
-
23
-
-
0034751673
-
Simultaneous prediction of aqueous solubility and octanl/water partition coefficient based on descriptors derived from molecular structure
-
Livingstone, D. J.; Ford, M. G.; Huuskonen, J. J.; Salt, D. W. Simultaneous prediction of aqueous solubility and octanl/water partition coefficient based on descriptors derived from molecular structure. J. Comput.-Aid. Mol. Des. 2001, 15, 741-752.
-
(2001)
J. Comput.-Aid. Mol. Des.
, vol.15
, pp. 741-752
-
-
Livingstone, D.J.1
Ford, M.G.2
Huuskonen, J.J.3
Salt, D.W.4
-
24
-
-
0023965741
-
SMILES a chemical language for information systems. 1. Introduction to methodology and encoding rules
-
Weinenger, D. SMILES: a Chemical Language for Information Systems. 1. Introduction to Methodology and Encoding Rules. J. Chem. Inf. Comput. Sci. 1988, 28, 31-36.
-
(1988)
J. Chem. Inf. Comput. Sci.
, vol.28
, pp. 31-36
-
-
Weinenger, D.1
-
25
-
-
0024664539
-
SMILES 2: Algorithm for generation of unique SMILES notation
-
Weinenger, D. SMILES 2: Algorithm for Generation of Unique SMILES Notation. J. Chem. Inf. Comput. Sci. 1989, 29, 97-101.
-
(1989)
J. Chem. Inf. Comput. Sci.
, vol.29
, pp. 97-101
-
-
Weinenger, D.1
-
26
-
-
0038494448
-
MDL information systems
-
MDL Information Systems. MDL CT file Formats.
-
MDL CT File Formats
-
-
-
27
-
-
0038494449
-
-
JOELib, http://joelib.sourceforge.net/.
-
-
-
-
28
-
-
0037818192
-
-
OELib, http://www.eyesopen.com/oelib/.
-
-
-
-
29
-
-
0000262640
-
A new atom-additive method for calculating partition coeffcients
-
Wang, R.; Fu, Y.; Lai, L. A New Atom-Additive Method for Calculating Partition Coeffcients. J. Chem. Inf. Comput. Sci. 1997, 37, 615-621.
-
(1997)
J. Chem. Inf. Comput. Sci.
, vol.37
, pp. 615-621
-
-
Wang, R.1
Fu, Y.2
Lai, L.3
-
30
-
-
0033820007
-
Calculating partition coeffcient by atom-additive method
-
Wang, R.; Gao, Y.; Lai, L. Calculating partition coeffcient by atom-additive method. Perspectives Drug Discovery Design 2000, 19, 47-66.
-
(2000)
Perspectives Drug Discovery Design
, vol.19
, pp. 47-66
-
-
Wang, R.1
Gao, Y.2
Lai, L.3
-
31
-
-
0000405995
-
Chemical information in 3D-space
-
Gasteiger, J.; Sadowski, J.; Schuur, J.; Selzer, P.; Steinhauer, L.; Steinhauer, V. Chemical Information in 3D-Space. J. Chem. Inf. Comput. Sci. 1996, 36, 1030-1037.
-
(1996)
J. Chem. Inf. Comput. Sci.
, vol.36
, pp. 1030-1037
-
-
Gasteiger, J.1
Sadowski, J.2
Schuur, J.3
Selzer, P.4
Steinhauer, L.5
Steinhauer, V.6
-
33
-
-
0028501716
-
Topological approach to Analgesia
-
Gálvez, J.; Garcia-Domenech, R.; Julián-Ortiz, V. D.; Soler, R. Topological Approach to Analgesia. J. Chem. Inf. Comput. Sci. 1994, 14, 1198-1203.
-
(1994)
J. Chem. Inf. Comput. Sci.
, vol.14
, pp. 1198-1203
-
-
Gálvez, J.1
Garcia-Domenech, R.2
Julián-Ortiz, V.D.3
Soler, R.4
-
34
-
-
0000125764
-
A new model for calculating atomic charges in molecules
-
Gasteiger, J.; Marsili, M. A New Model for Calculating Atomic Charges in Molecules. Tetrahedron Lett. 1978, 3181-3184.
-
(1978)
Tetrahedron Lett.
, pp. 3181-3184
-
-
Gasteiger, J.1
Marsili, M.2
-
35
-
-
0013105051
-
ESCHER - A computer program for the determination of external rotational symmetry numbers from molecular topology
-
Walters, W. P.; Yalkowsky, S. H. ESCHER-A Computer Program for the Determination of External Rotational Symmetry Numbers from Molecular Topology. J. Chem. Inf. Comput. Sci. 1996, 36, 1015-1017.
-
(1996)
J. Chem. Inf. Comput. Sci.
, vol.36
, pp. 1015-1017
-
-
Walters, W.P.1
Yalkowsky, S.H.2
-
36
-
-
0034268411
-
Distinguishing between natural products and synthetic molecules by descriptor Shannon entropy analysis and binary QSAR calculations
-
Stahura, F. L.; Godden, J. W.; Xue, L.; Bajorath, J. Distinguishing between Natural Products and Synthetic Molecules by Descriptor Shannon Entropy Analysis and Binary QSAR Calculations. J. Chem. Inf. Comput. Sci. 2001, 41, 1245-1252.
-
(2001)
J. Chem. Inf. Comput. Sci
, vol.41
, pp. 1245-1252
-
-
Stahura, F.L.1
Godden, J.W.2
Xue, L.3
Bajorath, J.4
-
38
-
-
0000709242
-
On the use of information theory for assessing molecular diversity
-
Agrafiotis, D. K. On the Use of Information Theory for Assessing Molecular Diversity. J. Chem. Inf. Comput. Sci. 1997, 37, 576-580.
-
(1997)
J. Chem. Inf. Comput. Sci.
, vol.37
, pp. 576-580
-
-
Agrafiotis, D.K.1
-
39
-
-
0035412802
-
Differential Shannon entropy as a sensitive measure of differences in database variability of molecular descriptors
-
Godden, J. W.; Bajorath, J. Differential Shannon Entropy as a Sensitive Measure of Differences in Database Variability of Molecular Descriptors. J. Chem. Inf. Comput. Sci. 2001, 41, 1060-1066.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 1060-1066
-
-
Godden, J.W.1
Bajorath, J.2
-
40
-
-
0036589152
-
Differential Shannon entropy analysis identifies molecular property descriptors that predict aqueous solubility of synthetic compounds with high accuracy in binary QSAR calculations
-
Stahura, F. L.; Godden, J. W.; Bajorath, J. Differential Shannon Entropy Analysis Identifies Molecular Property Descriptors that Predict Aqueous Solubility of Synthetic Compounds with High Accuracy in Binary QSAR Calculations. J. Chem. Inf. Comput. Sci. 2002, 42, 550-558.
-
(2002)
J. Chem. Inf. Comput. Sci.
, vol.42
, pp. 550-558
-
-
Stahura, F.L.1
Godden, J.W.2
Bajorath, J.3
-
42
-
-
15844383852
-
Selecting combinatorial libraries to optimize diversity and physical properties
-
Gillet, V. J.; Willett, P.; Bradshaw, J.; Green, D. V. S. Selecting Combinatorial Libraries to Optimize Diversity and Physical Properties. J. Chem. Inf. Comput. Sci. 1999, 39, 169-177.
-
(1999)
J. Chem. Inf. Comput. Sci.
, vol.39
, pp. 169-177
-
-
Gillet, V.J.1
Willett, P.2
Bradshaw, J.3
Green, D.V.S.4
-
43
-
-
0002590155
-
The maximum clique problem
-
Du, D.-Z., Pardalos, P. M., Eds.; Kluwer Academic Publishers: Boston, MA
-
Bomze, I.; Budinich, M.; Pardalos, P.; Pelillo, M. The maximum clique problem. In Handbook of Combinatorial Optimization; Du, D.-Z., Pardalos, P. M., Eds.; Kluwer Academic Publishers: Boston, MA, 1999; Vol. 4.
-
(1999)
Handbook of Combinatorial Optimization
, vol.4
-
-
Bomze, I.1
Budinich, M.2
Pardalos, P.3
Pelillo, M.4
-
44
-
-
84976668743
-
Finding all cliques of an undirected graph
-
Bron, C.; Kerbosch, J. Finding all cliques of an undirected graph. Comm. ACM 1973, 16, 575-577.
-
(1973)
Comm. ACM
, vol.16
, pp. 575-577
-
-
Bron, C.1
Kerbosch, J.2
-
45
-
-
0031833463
-
Selection of reagents for combinatorial synthesis using clique detection
-
Gardiner, E. J.; Holliday, J. D.; Willett, P.; Wilton, D. J.; Artymiuk, P. J. Selection of reagents for combinatorial synthesis using clique detection. Quant. Struct.-Act. Relat. 1998, 17, 232-236.
-
(1998)
Quant. Struct.-Act. Relat.
, vol.17
, pp. 232-236
-
-
Gardiner, E.J.1
Holliday, J.D.2
Willett, P.3
Wilton, D.J.4
Artymiuk, P.J.5
-
46
-
-
47649088769
-
-
Java Neural Network Simulator, http://www-ra.informatik.uni-tuebingen.de/forschung/javanns/welcome.html.
-
Java Neural Network Simulator
-
-
-
49
-
-
0344950280
-
A Consensus neural network-based technique for discriminating soluble poorly soluble compounds
-
Manallack, D. T.; Tehan, B. G.; Gancia, E.; Hudson, B. D.; Ford, M. G.; Livingstone, D. J.; Whitley, D. C.; Pitt, W. R. A Consensus Neural Network-Based Technique for Discriminating Soluble and Poorly Soluble Compounds. J. Chem. Inf. Comput. Sci. 2003, 43, 674-679.
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 674-679
-
-
Manallack, D.T.1
Tehan, B.G.2
Gancia, E.3
Hudson, B.D.4
Ford, M.G.5
Livingstone, D.J.6
Whitley, D.C.7
Pitt, W.R.8
-
50
-
-
0026597449
-
Simple method of calculating octanol/water partition coefficient
-
Moriguchi, I.; Hirono, S.; Liu, Q.; Nakagome, I. Matsushita, Y. Simple Method of Calculating Octanol/Water Partition Coefficient. Chem. Pharm. Bull. 1992, 40, 127-130.
-
(1992)
Chem. Pharm. Bull.
, vol.40
, pp. 127-130
-
-
Moriguchi, I.1
Hirono, S.2
Liu, Q.3
Nakagome, I.4
Matsushita, Y.5
-
51
-
-
0028266406
-
Comparison of reliability of logP values for drugs calculated by several methods
-
Moriguchi, I.; Hirono, S.; Nakagome, I. Matsushita, Y. Comparison of Reliability of logP Values for Drugs Calculated by Several Methods. Chem. Pharm. Bull. 1994, 42, 976-978.
-
(1994)
Chem. Pharm. Bull.
, vol.42
, pp. 976-978
-
-
Moriguchi, I.1
Hirono, S.2
Nakagome, I.3
Matsushita, Y.4
-
52
-
-
0027325507
-
On the reliability of calculated log P-values: Rekker, Hansch/Leo and Suzuki approach
-
Rekker, R. F.; Laak, A. M. On the Reliability of Calculated Log P-values: Rekker, Hansch/Leo and Suzuki Approach. Quant. Struct.-Act. Relat. 1993, 12, 152-157.
-
(1993)
Quant. Struct.-Act. Relat.
, vol.12
, pp. 152-157
-
-
Rekker, R.F.1
Laak, A.M.2
-
53
-
-
0025439652
-
Automatic log P estimation based on combined additive modeling methods
-
Suzuki, T.; Kudo, Y. Automatic log P estimation based on combined additive modeling methods J. Comput. Aided Mol. Des. 1990, 4, 155-198.
-
(1990)
J. Comput. Aided Mol. Des.
, vol.4
, pp. 155-198
-
-
Suzuki, T.1
Kudo, Y.2
|