Membrane-bound orientation and position of the synaptotagmin I C2A domain by site-directed spin labeling

Biochemistry

Volumn 42, Issue 1, 2003, Pages 96-105

  Frazier, April A ^a   Roller, Christina R ^a   Havelka, Jessica J ^b   Hinderliter, Anne ^b   Cafiso, David S ^a  

^a UNIVERSITY OF VIRGINIA   (United States)

^b NORTH DAKOTA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING LOOP;

BIOLOGICAL MEMBRANES; HYDROCARBONS; LIPIDS; POLYPEPTIDES;

BIOCHEMISTRY;

CALCIUM ION; SYNAPTOTAGMIN; SYNAPTOTAGMIN I; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CALCIUM BINDING; ELECTRON SPIN RESONANCE; HYDROPHOBICITY; MOLECULAR INTERACTION; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN DOMAIN; SPIN LABELING;

BINDING SITES; CALCIUM; CALCIUM-BINDING PROTEINS; CYSTEINE; ELECTRON SPIN RESONANCE SPECTROSCOPY; LIPID BILAYERS; MEMBRANE GLYCOPROTEINS; MUTAGENESIS, SITE-DIRECTED; NERVE TISSUE PROTEINS; PHOSPHATIDYLCHOLINES; PHOSPHATIDYLETHANOLAMINES; PHOSPHOLIPIDS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SPIN LABELS; SYNAPTOTAGMIN I; SYNAPTOTAGMINS; THERMODYNAMICS;

INSERTION SEQUENCES;

EID: 0037435606     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi0268145     Document Type: Article

References (69)

1. Columbus, L., Kalai, T., Jeko, J., Hideg, K., and Hubbell, W. L. (2001) Biochemistry 40, 3828-3846.
2. McLaughlin, S., and Aderem, A. (1995) TIBS 20, 272-276.
3. Murray, D., Ben-Tal, N., Honig, B., and McLaughlin, S. (1997) Structure 5, 985-989.
4. Hurley, J. H., and Misra, S. (2000) Annu. Revs. Biophys. Biomol. Struct. 29, 49-79.
5. Gibson, T. J., Hyvonen, M., Musacchio, A., Saraste, M., and Birney, E. (1994) Trends Biochem. Sci. 19, 349-353.
6. Ponting, C. P., and Parker, P. J. (1996) Protein Sci. 5, 162-166.
7. Burd, C. G., and Emr, S. D. (1998) Mol. Cell 2, 157-162.
8. Gaullier, J.-M., Simonsen, A., D'Arrigo, A., Bremnes, B., Stenmark, H., and Aasland, R. (1998) Nature 394, 432-433.
9. Patki, V., Lawe, D. C., Corvera, S., Virbasius, J. V., and Chawla, A. (1998) Nature 394, 433-434.
10. Ponting, C. P. (1996) Protein Sci. 5, 2353-2357.
11. Kay, B. K., Yamabhal, M., Wendland, B., and Emr, S. D. (1999) Protein Sci. 8, 435-438.
12. Lemmon, M. A., Ferguson, K. M., O'Brien, R., Sigler, P. B., and Schlessinger, J. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 10472- 10476.
13. Lemmon, M. A., Ferguson, K. M., and Abrams, C. S. (2002) FEBS Lett. 513, 71-76.
14. Lee, J. O., Yang, H., Georgescu, M. M., Di Cristofano, A., Maehama, T., Shi, Y., Dixon, J. E., Pandolfi, P., and Pavletich, N. P. (1999) Cell 99, 323-334.
15. Nalefski, E. A., and Falke, J. J. (1996) Protein Sci. 5, 2375-2390.
16. Nalefski, E. A., Wisner, M. A., Chen, J. Z., Sprang, S. R., Fukuda, M., Mikoshiba, K., and Falke, J. J. (2001) Biochemistry 40, 3089-3100.
17. Rizo, J., and Sudhof, T. C. (1998) J. Biol. Chem. 273, 15879-15882.
18. Tucker, W. C., and Chapman, E. R. (2002) Biochem. J. 366, 1-13.
19. Davletov, B. A., and Sudhof, T. C. (1993) J. Biol. Chem. 268, 26386-26390.
20. Zhang, X., Rizo, J., and Sudhof, T. C. (1998) Biochemistry 37, 12395-403.
21. Bai, J., Wang, P., and Chapman, E. R. (2002) Proc. Natl. Acad. Sci. U.S.A. 99, 1665-1670.
22. Mackler, J. M., Drummond, J. A., Loewen, C. A., Robinson, I. M., and Reist, N. E. (2002) Nature, 340-344.
23. Sutton, R. B., Davletoc, B. A., Berghuis, A. M., Sudhof, T. C., and Sprang, S. R. (1995) Cell 80, 929-938.
24. Chae, Y. K., Abildgaard, F., Chapman, E. R., and Markley, J. L. (1998) J. Biol. Chem. 273, 25659-63.
25. Xu, G.-Y., McDonagh, T., Yu, H.-A., Nalefski, E. A., Clark, J. D., and Cumming, D. A. (1998) J. Mol. Biol. 280, 485-500.
26. Nalefski, E. A., and Falke, J. J. (1998) Biochemistry 37, 17642-17650.
27. Ball, A., Nielsen, R., Gelb, M. H., and Robinson, B. H. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 6637-6642.
28. Frazier, A. A., Wisner, M. A., Malmberg, N. J., Victor, K. G., Fanucci, G. E., Nalefski, E. A., Falke, J. J., and Cafiso, D. S. (2002) Biochemistry 41, 6282-6292.
29. Davletov, B., Perisic, O., and Williams, R. L. (1998) J. Biol. Chem. 273, 19093-19096.
30. Bittova, L., Sumandea, M., and Cho, W. (1999) J. Biol. Chem. 274, 9665-9672.
31. Chapman, E. R., and Davis, A. F. (1998) J. Biol. Chem. 273, 13995-4001.
32. Fernandez, I., Arac, D., Ubach, J., Gerber, S. H., Shin, O., Gao, Y., Anderson, R. G., Sudhof, T. C., and Rizo, J. (2001) Neuron 32, 1057-1069.
33. Fernandez-Chacon, R., Konigstorfer, A., Gerber, S. H., Garcia, J., Matos, M. F., Stevens, C. F., Brose, N., Rizo, J., Rosenmund, C., and Sudhof, T. C. (2001) Nature 410, 41-49.
34. Swairjo, M. A., Concha, N. O., Kaetzel, M. A., Dedman, J. R., and Seaton, B. A. (1995) Nat. Struct. Biol. 2, 968-974.
35. Grobler, J. A., Essen, L.-O., Williams, R. L., and Hurley, J. H. (1996) Nat. Struct. Biol. 3, 788-795.
36. Shao, X., Fernandez, I., Sudhof, T. C., and Rizo, J. (1998) Biochemistry 37, 16106-15.
37. Murray, D., and Honig, B. (2002) Mol. Cell 9, 145-154.
38. Hubbell, W. L., Cafiso, D. S., and Altenbach, C. (2000) Nat. Struct. Biol. 7, 735-739.
39. Hubbell, W. L., Gross, A., Langen, R., and Lietzow, M. A. (1998) Curr. Op. Struct. Biol. 8, 649-656.
40. Hubbell, W. L., Mchaourab, H. S., Altenbach, C., and Lietzow, M. A. (1996) Structure 4, 779-783.
41. Hubbell, W., and Altenbach, C. (1994) Curr. Opin. Struct. Biol. 4, 566-578.
42. Altenbach, C., Greenhalgh, D. A., Khorana, H. G., and Hubbell, W. L. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 1667-1671.
43. Guan, K. L., and Dixon, J. E. (1991) Anal. Biochem. 192, 262-7.
44. Damer, C. K., and Creutz, C. E. (1994) J. Biol. Chem. 49, 31115-31123.
45. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A laboratory Manual, Cold Spring Harbor Press, Plainview, NY.
46. Perin, M. S., Brose, N., Jahn, R., and Sudhof, T. C. (1991) J. Biol. Chem. 266, 623-9.
47. Hinderliter, A., Almeida, P. F. F., Creutz, C. E., and Biltonen, R. L. (2001) Biochemistry 40, 4181-4191.
48. Columbus, L., and Hubbell, W. L. (2002) Trends Biochem. Sci. 27, 288-295.
49. Langen, R., Oh, K. J., Cascio, D., and Hubbell, W. L. (2000) Biochemistry 39, 8396-8405.
50. Freed, J. H. (1976) in Spin Labeling. Theory and Applications (Berliner, L. J., Ed.) pp 592, Academic Press, New York.
51. Mchaourab, H., Lietzow, M., Hideg, K., and Hubbell, W. (1996) Biochemistry 35, 7692-7704.
52. Budil, D. E., Lee, S., Saxena, S., and Freed, J. H. (1996) J. Magn. Reson. Ser. A 120, 155-189.
53. Tieleman, D. P., Berendsen, H. J., and Sansom, M. S. (1999) Biophys. J. 76, 1757-69.
54. Tieleman, D. P., Berendsen, H. J., and Sansom, M. S. (1999) Biophys. J. 76, 3186-91.
55. Tieleman, D. P., Sansom, M. S., and Berendsen, H. J. (1999) Biophys. J, 76, 40-9.
56. Roux, M., Neumann, J.-M., Bloom, M., and Devaux, P. F. (1988) Eur. Biophys. J. 16, 267-273.
57. Ben-Tal, N., Honig, B., Peitzsch, R. M., Denisov, G., and McLaughlin, S. (1996) Biophys. J. 71, 561-575.
58. Victor, K., and Cafiso, D. S. (1998) Biochemistry 37, 3402-3410.
59. Victor, K. G., and Cafiso, D. S. (2001) Biophys. J. 81, 2241-2250.
60. Qin, Z., Wertz, S. L., Jacob, J., Savino, Y., and Cafiso, D. S. (1996) Biochemistry 35, 13272-13276.
61. Murray, D., Arbuzova, A., Hangyas-Mihalyne, G., Gambhir, A., Ben-Tal, N., Honig, B., and McLaughlin, S. (1999) Biophys. J. 77, 3176-3188.
62. Ubach, J., Zhang, X., Shao, X., Sudhof, T. C., and Rizo, J. (1998) EMBO J. 17, 3921-3930.
63. Bennett, M. K., Calakos, N., and Scheller, R. (1992) Science 257, 255-259.
64. Chapman, E. R., Hanson, P. I., An, S., and Jahn, R. (1995) J. Biol. Chem. 270, 23667-71.
65. Kee, Y., and Scheller, R. H. (1996) J. Neurosci. 16, 1975-1981.
66. Davis, A. F., Bai, J., Fasshauer, D., Wolowick, M. J., Lewis, J. L., and Chapman, E. R. (1999) Neuron 24, 363-376.
67. Lewis, J. L., Dong, M., Earles, C. A., and Chapman, E. R. (2001) J. Biol. Chem. 276, 15458-65.
68. Kim, C. S., Kweon, D.-H., and Shin, Y.-K. (2002) Biochemistry 41, 10928-10933.
69. Kweon, D. H., Kim, C. S., and Shin, Y. K. (2002) Biochemistry. 41, 9264-8.