-
1
-
-
0034604105
-
A surprising simplicity to protein folding
-
Baker D. A surprising simplicity to protein folding. Nature. 405:2000;39-42.
-
(2000)
Nature
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
2
-
-
0032502839
-
Contact order, transition state placement and the refolding rates of single domain proteins
-
Plaxco K.W., Simons K.T., Baker D. Contact order, transition state placement and the refolding rates of single domain proteins. J. Mol. Biol. 277:1998;985-994.
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
3
-
-
0032750509
-
The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved
-
Martinez J.C., Serrano L. The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved. Nature Struct. Biol. 6:1999;1010-1016.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 1010-1016
-
-
Martinez, J.C.1
Serrano, L.2
-
4
-
-
0032734515
-
Experiment and theory highlight role of native state topology in SH3 folding
-
Riddle D.S., Grantcharova V.P., Santiago J.V., Alm E., Ruczinski I., Baker D. Experiment and theory highlight role of native state topology in SH3 folding. Nature Struct. Biol. 6:1999;1016-1024.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 1016-1024
-
-
Riddle, D.S.1
Grantcharova, V.P.2
Santiago, J.V.3
Alm, E.4
Ruczinski, I.5
Baker, D.6
-
6
-
-
0032708771
-
Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding
-
Chiti F., Taddei N., White P.M., Bucciantini M., Magherini F., Stefani M., Dobson C.M. Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding. Nature Struct. Biol. 6:1999;1005-1009.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 1005-1009
-
-
Chiti, F.1
Taddei, N.2
White, P.M.3
Bucciantini, M.4
Magherini, F.5
Stefani, M.6
Dobson, C.M.7
-
7
-
-
0032515105
-
Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain
-
Villegas V., Martinez J.C., Aviles F.X., Serrano L. Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain. J. Mol. Biol. 283:1998;1027-1036.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 1027-1036
-
-
Villegas, V.1
Martinez, J.C.2
Aviles, F.X.3
Serrano, L.4
-
9
-
-
0033871567
-
Critical role of β-hairpin formation in protein G folding
-
McCallister E.L., Alm E., Baker D. Critical role of β-hairpin formation in protein G folding. Nature Struct. Biol. 7:2000;669-673.
-
(2000)
Nature Struct. Biol.
, vol.7
, pp. 669-673
-
-
McCallister, E.L.1
Alm, E.2
Baker, D.3
-
10
-
-
0034964196
-
Computer-based redesign of a protein folding pathway
-
Nauli S., Kuhlman B., Baker D. Computer-based redesign of a protein folding pathway. Nature Struct. Biol. 8:2001;602-605.
-
(2001)
Nature Struct. Biol.
, vol.8
, pp. 602-605
-
-
Nauli, S.1
Kuhlman, B.2
Baker, D.3
-
11
-
-
0036300662
-
Accurate computer-based design of a new backbone conformation in the second turn of protein L
-
Kuhlman B., O'Neill J.W., Kim D.E., Zhang K.Y.L., Baker D. Accurate computer-based design of a new backbone conformation in the second turn of protein L. J. Mol. Biol. 315:2002;471-477.
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 471-477
-
-
Kuhlman, B.1
O'Neill, J.W.2
Kim, D.E.3
Zhang, K.Y.L.4
Baker, D.5
-
12
-
-
0031005061
-
The energy landscape of a fast-folding protein mapped by Ala-Gly substitutions
-
Burton R.E., Huang G.S., Daugherty M.A., Calderone T.L., Oas T.G. The energy landscape of a fast-folding protein mapped by Ala-Gly substitutions. Nature Struct. Biol. 4:1997;305-310.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 305-310
-
-
Burton, R.E.1
Huang, G.S.2
Daugherty, M.A.3
Calderone, T.L.4
Oas, T.G.5
-
13
-
-
0032554626
-
Protein folding dynamics: Quantitative comparison between theory and experiment
-
Burton R.E., Myers J.K., Oas T.G. Protein folding dynamics: quantitative comparison between theory and experiment. Biochemistry. 37:1998;5337-5343.
-
(1998)
Biochemistry
, vol.37
, pp. 5337-5343
-
-
Burton, R.E.1
Myers, J.K.2
Oas, T.G.3
-
14
-
-
0035324637
-
How Ala-Gly mutations in different helices affect the stability of the apomyoglobin molten globule
-
Luo Y., Baldwin R.L. How Ala-Gly mutations in different helices affect the stability of the apomyoglobin molten globule. Biochemistry. 40:2001;5283-5289.
-
(2001)
Biochemistry
, vol.40
, pp. 5283-5289
-
-
Luo, Y.1
Baldwin, R.L.2
-
15
-
-
0036307683
-
Application of the diffusion-collision model to the folding of three-helix bundle proteins
-
Islam S.A., Karplus M., Weaver D.L. Application of the diffusion-collision model to the folding of three-helix bundle proteins. J. Mol. Biol. 318:2002;199-215.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 199-215
-
-
Islam, S.A.1
Karplus, M.2
Weaver, D.L.3
-
16
-
-
0035170463
-
Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate
-
Capaldi A.P., Shastry M.C.R., Kleanthous C., Roder H., Radford S.E. Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate. Nature Struct. Biol. 8:2001;68-72.
-
(2001)
Nature Struct. Biol.
, vol.8
, pp. 68-72
-
-
Capaldi, A.P.1
Shastry, M.C.R.2
Kleanthous, C.3
Roder, H.4
Radford, S.E.5
-
18
-
-
0033548553
-
Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9
-
Ferguson N., Capaldi A.P., James R., Kleanthous C., Radford S.E. Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9. J. Mol. Biol. 286:1999;1597-1608.
-
(1999)
J. Mol. Biol.
, vol.286
, pp. 1597-1608
-
-
Ferguson, N.1
Capaldi, A.P.2
James, R.3
Kleanthous, C.4
Radford, S.E.5
-
19
-
-
0035896036
-
Using chimeric immunity proteins to explore the energy landscape for α-helical protein folding
-
Ferguson N., Li W., Capaldi A.P., Kleanthous C., Radford S.E. Using chimeric immunity proteins to explore the energy landscape for α-helical protein folding. J. Mol. Biol. 307:2001;393-405.
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 393-405
-
-
Ferguson, N.1
Li, W.2
Capaldi, A.P.3
Kleanthous, C.4
Radford, S.E.5
-
20
-
-
0035965128
-
Acidic conditions stabilise imtermediates populated during the folding of Im7 and Im9
-
Gorski S.A., Capaldi A.P., Kleanthous C., Radford S.E. Acidic conditions stabilise imtermediates populated during the folding of Im7 and Im9. J. Mol. Biol. 312:2001;849-863.
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 849-863
-
-
Gorski, S.A.1
Capaldi, A.P.2
Kleanthous, C.3
Radford, S.E.4
-
21
-
-
0035478958
-
Immunity proteins: Enzyme inhibitors that avoid the active site
-
Kleanthous C., Walker D. Immunity proteins: enzyme inhibitors that avoid the active site. Trends Biochem. Sci. 26:2001;624-631.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 624-631
-
-
Kleanthous, C.1
Walker, D.2
-
22
-
-
0026511656
-
The folding of an enzyme. 1. Theory of protein engineering analysis of stability and pathway of protein folding
-
Fersht A.R., Matouschek A., Serrano L. The folding of an enzyme. 1. Theory of protein engineering analysis of stability and pathway of protein folding. J. Mol. Biol. 224:1992;771-782.
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 771-782
-
-
Fersht, A.R.1
Matouschek, A.2
Serrano, L.3
-
24
-
-
0030867940
-
Protein-protein interaction specificity of Im9 for the endonuclease toxin colicin E9 defined by homologue-scanning mutagenesis
-
Li W., Dennis C.A., Moore G.R., James R., Kleanthous C. Protein-protein interaction specificity of Im9 for the endonuclease toxin colicin E9 defined by homologue-scanning mutagenesis. J. Biol. Chem. 272:1997;22253-22258.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 22253-22258
-
-
Li, W.1
Dennis, C.A.2
Moore, G.R.3
James, R.4
Kleanthous, C.5
-
25
-
-
0032566286
-
Dual recognition and the role of specificity-determining residues in colicin E9 DNase-immunity protein interactions
-
Li W., Hammil S.J., Hemmings A.M., Moore G.R., James R., Kleanthous C. Dual recognition and the role of specificity-determining residues in colicin E9 DNase-immunity protein interactions. Biochemistry. 37:1998;11771-11779.
-
(1998)
Biochemistry
, vol.37
, pp. 11771-11779
-
-
Li, W.1
Hammil, S.J.2
Hemmings, A.M.3
Moore, G.R.4
James, R.5
Kleanthous, C.6
-
26
-
-
0034283147
-
Specificity in protein-protein interactions: The structural basis for dual recognition in endonuclease colicin-immunity protein complexes
-
Kulmann U.C., Pommer A.J., Moore G.R., James R., Kleanthous C. Specificity in protein-protein interactions: the structural basis for dual recognition in endonuclease colicin-immunity protein complexes. J. Mol. Biol. 301:2000;1163-1178.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 1163-1178
-
-
Kulmann, U.C.1
Pommer, A.J.2
Moore, G.R.3
James, R.4
Kleanthous, C.5
-
27
-
-
0032512424
-
Specificity in protein-protein recognition: Conserved Im9 residues are the major determinants of stability in the colicin E9 DNase-Im9 complex
-
Wallis R., Leung K.-Y., Osbourne M.J., James R., Moore G., Kleanthous C. Specificity in protein-protein recognition: conserved Im9 residues are the major determinants of stability in the colicin E9 DNase-Im9 complex. Biochemistry. 37:1998;476-485.
-
(1998)
Biochemistry
, vol.37
, pp. 476-485
-
-
Wallis, R.1
Leung, K.-Y.2
Osbourne, M.J.3
James, R.4
Moore, G.5
Kleanthous, C.6
-
28
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W., Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers. 22:1983;2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
29
-
-
0032553332
-
Elucidating the folding problem of α-helices: Local motifs, long-range electrostatics, ionic strength dependence and prediction of NMR parameters
-
Lacroix E., Viguera A.R., Serrano L. Elucidating the folding problem of α-helices: local motifs, long-range electrostatics, ionic strength dependence and prediction of NMR parameters. J. Mol. Biol. 284:1998;173-191.
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 173-191
-
-
Lacroix, E.1
Viguera, A.R.2
Serrano, L.3
-
30
-
-
0028873081
-
Elucidating the folding problem of α-helical peptides using empirical parameters. II. Helix macrodiapole effects and rational modification of the helical content of natural peptides
-
Muñoz V., Serrano L. Elucidating the folding problem of α-helical peptides using empirical parameters. II. Helix macrodiapole effects and rational modification of the helical content of natural peptides. J. Mol. Biol. 245:1994;275-296.
-
(1994)
J. Mol. Biol.
, vol.245
, pp. 275-296
-
-
Muñoz, V.1
Serrano, L.2
-
31
-
-
0028834210
-
Elucidating the folding problem of α-helical peptides using empirical parameters. III. Temperature and pH dependence
-
Muñoz V., Serrano L. Elucidating the folding problem of α-helical peptides using empirical parameters. III. Temperature and pH dependence. J. Mol. Biol. 245:1994;297-308.
-
(1994)
J. Mol. Biol.
, vol.245
, pp. 297-308
-
-
Muñoz, V.1
Serrano, L.2
-
32
-
-
0031127043
-
Development of multiple sequence approximation within the Agadir model of α-helix formation. Comparison with Zimm-Bragg and Lifson-Roig formalisms
-
Muñoz V., Serrano L. Development of multiple sequence approximation within the Agadir model of α-helix formation. Comparison with Zimm-Bragg and Lifson-Roig formalisms. Biopolymers. 41:1997;495-509.
-
(1997)
Biopolymers
, vol.41
, pp. 495-509
-
-
Muñoz, V.1
Serrano, L.2
-
33
-
-
0033592876
-
From snapshot to movie: Φ analysis of protein folding transition states taken one step further
-
Ternstom T., Mayor U., Akke M., Oliveberg M. From snapshot to movie: Φ analysis of protein folding transition states taken one step further. Proc. Natl Acad. Sci. USA. 96:1999;14854-14859.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 14854-14859
-
-
Ternstom, T.1
Mayor, U.2
Akke, M.3
Oliveberg, M.4
-
34
-
-
0026244229
-
MOLSCRIPT - A program to produce both detailed and schematic plots of protein structures
-
Kraulis P.J. MOLSCRIPT - a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallog. 24:1991;946-950.
-
(1991)
J. Appl. Crystallog.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
35
-
-
0030815133
-
Raster 3D: Photorealistic molecular graphics
-
Merrit E.A., Bacon D.J. Raster 3D: photorealistic molecular graphics. Methods Enzymol. 277:1997;505-524.
-
(1997)
Methods Enzymol.
, vol.277
, pp. 505-524
-
-
Merrit, E.A.1
Bacon, D.J.2
-
36
-
-
0032127769
-
A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity
-
Dennis C.A., Videler H., Paupit R.A., Wallis R., James R., Moore G.R., Kleanthous C. A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity. Biochem. J. 333:1998;183-191.
-
(1998)
Biochem. J.
, vol.333
, pp. 183-191
-
-
Dennis, C.A.1
Videler, H.2
Paupit, R.A.3
Wallis, R.4
James, R.5
Moore, G.R.6
Kleanthous, C.7
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