A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity

Biochemical Journal

Volumn 333, Issue 1, 1998, Pages 183-191

  Dennis, Caitríona A ^a,b,d   Videler, Hortense ^a   Pauptit, Richard A ^b   Wallis, Russell ^c   James, Richard ^a   Moore, Geoffrey R ^a   Kleanthous, Colin ^a  

^a UNIVERSITY OF EAST ANGLIA   (United Kingdom)

^b ASTRAZENECA   (United Kingdom)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d UNIVERSITY OF LEEDS   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COLICIN; DEOXYRIBONUCLEASE;

ARTICLE; COMPARATIVE STUDY; CRYSTAL STRUCTURE; ESCHERICHIA COLI; GENETIC ENGINEERING; IMMUNITY; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; ULTRACENTRIFUGATION;

EID: 0032127769     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/bj3330183     Document Type: Article

References (53)

1. James, R., Kleanthous, C. and Moore, G. R. (1996) Microbiology 142, 1569-1580
2. Ohno-Iwashita, Y. and Imahori, K. (1980) Biochemistry 19, 652-659
3. Di Masi, D. R., White, D. C., Schnaitman, C. A. and Bradbeer, C. (1973) J. Bacteriol. 115, 506-513
4. Pattus, F., Massotte, D., Wilmsen, H. U., Lakey, J., Tsernoglou, D., Tucker, A. and Parker, M. W. (1990) Experimentia 46, 180-192
5. Stroud, B. (1995) Curr. Opin. Struct. Biol. 5, 514-520
6. Cramer, W. A., Heyman, J. B., Schendal, S. L., Deriy, B. N., Choen, F. S., Elkins, P. A. and Stauffacher, C. V. (1995) Annu. Rev. Biophys. Biomol. Struct. 24, 611-641
7. Gouaux, E. (1997) Structure 5, 313-317
8. Boon, T. (1971) Proc. Natl. Acad. Sci. U.S.A. 68, 2421-2425
9. Senior, B. W. and Holland, I. B. (1971) Proc. Natl. Acad. Sci. U.S.A. 68, 959-963
10. Schaller, K. and Nomura, M. (1976) Proc. Natl. Acad. Sci. U.S.A. 73, 3989-3993
11. Jakes, K. S. and Zinder, N. D. (1974) Proc. Natl. Acad. Sci. U.S.A. 71, 3380-3384
12. Watson, R., Rowsome, W., Tsao, J. and Visentin, L. P. (1981) J. Bacteriol. 147, 569-577
13. Cooper, P. C. and James, R. (1984) J. Gen. Microbiol. 130, 209-215
14. Sidikaro, J. and Nomura, M. (1974) J. Biol. Chem. 249, 445-453
15. Wallis, R., Reilly, A., Rowe, A., Moore, G. R., James, R. and Kleanthous, C. (1992) Eur. J. Biochem 207, 687-695
16. Wallis, R., Moore, G. R., James, R. and Kleanthous, C. (1995) Biochemistry 34, 13743-13750
17. Pugsley, A. P. and Schwartz, M. (1983) Mol. Gen. Genet. 190, 366-372
18. Lau, C. K., Parsons, M. and Uchimura, T. (1992) in Bacteriocins, Microcins and Lantibiotics (James, R., Lazdunski, C. and Pattus, F., eds.), pp. 353-378, NATO ASI Series H, Springer, Heidelberg
19. Wallis, R., Leung, K.-Y., Pommer, A. J., Videler, H., Moore, G. R., James, R. and Kleanthous, C. (1995) Biochemistry 34, 13751-13759
20. Wallis, R., Reilly, A., Barnes, K., Abell, C., Campbell, D. G., Moore, G. R., James, R. and Kleanthous, C. (1994) Eur. J. Biochem. 220, 447-454
21. Garinot-Schneider, C., Pommer, A. J., Moore, G. R., Kleanthous, C. and James, R. (1996) J. Mol. Biol. 260, 731-742
22. Curtis, M. D. and James, R. (1991) Mol. Microbiol. 5, 2727-2733
23. Osborne, M. J., Lian, L.-Y., Wallis, R., Reilly, A., James, R., Kleanthous, C. and Moore, G. R. (1994) Biochemistry 33, 12347-12355
24. Osborne, M. J., Breeze, A., Lian, L.-Y., Reilly, A., James, R., Kleanthous, C. and Moore, G. R. (1996) Biochemistry 35, 9505-9512
25. Osborne, M. J., Wallis, R., Leung, K.-Y., Williams, G., Lian, L.-Y., Kleanthous, C. and Moore, G. R. (1997) Biochem. J. 323, 823-831
26. Li, W., Dennis, C. A., James, R., Moore, G. R. and Kleanthous, C. (1997) J. Biol. Chem. 272, 22253-22258
27. Chak, K.-F., Safo, M. K., Ku, W.-Y., Hsieh, S.-Y. and Yuan, H. S. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 6437-6442
28. Hsieh, S.-Y., Ko, T.-P., Tseng, M.-Y., Ku, W.-Y., Chak, K.-F. and Yuan, H. S. (1997) EMBO J. 16, 1444-1454
29. Cohn, E. J. and Edsall, J. T. (1943) in Proteins, Amino Acids and Peptides as Ions and Dipolar Ions, pp. 370-381, Reinhold, New York
30. Johnson, M. L., Correia, J. J., Yphantis, D. A. and Halvorson, H. R. (1981) Biophys. J. 36, 575-588
31. Kabsch, W. (1988) J. Appl. Crystallogr. 21, 67-71
32. Kabsch, W. (1993) J. Appl. Crystallogr. 26, 795-800
33. Collaborative computational project, no. 4 (1994), Acta Cryst. D50, 760-763
34. Navaza, J. (1994) Acta Crystallogr. A50, 157-163
35. Navaza, J. and Saludjian, P. (1997) Methods in Enzymol. 276, 581-594
36. Jones, T. A., Zou, J.-Y., Cowan, S. W. and Kjeldgaard, M. (1991) Acta Crystallogr. A47, 110-119
37. Murshodov, G. N., Dodson, E. J. and Vagin, A. A. (1996) in Macromolecular refinement: Proceedings of the CCP4 study weekend (Dodson, E., Moore, M., Ralph, A. and Bailey, S., eds.), pp. 93-104, Daresbury Laboratory, Warrington
38. Murshodov, G. N., Vagin, A. A. and Dodson, E. J. (1997) Acta Crystallogr. D53, 240-255
39. Laskowski, R. A., Macarthur, M. W., Moss, D. S. and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-292
40. Ku, W.-Y., Wang, C.-S., Chen, C.-Y., Chak, K.-F., Safo, M. K. and Yuan, H. S. (1995) Proteins Struct. Funct. Genet. 23, 588-590
41. Crosio, M. P., Janin, J. and Jullien, M. (1992) J. Mol. Biol. 228, 243-251
42. Janin, J. and Rodier, F. (1995) Proteins Struct. Funct. Genet. 23, 580-587
43. Brünger, A. T., Campbell, R. L., Clore, G. M., Gronenborn, A. M., Karplus, M., Petsko, G. A. and Teeter, M. M. (1987) Science 235, 1049-1053
44. Braun, W., Epp, O., Wuthrich, K. and Huber, R. (1989) J. Mol. Biol. 206, 669-676
45. Baldwin, E. T., Weber, I. T., St Charles, R., Xuan, J. C., Appella, E., Yamada, M., Matsushima, K., Edwards, B. F. P., Clore, G. M., Gronenborn, A. M. and Wlodawer, R. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 502-506
46. Müller, T., Oehlenschlayer, F. and Buehner, M. (1995) J. Mol. Biol. 247, 360-372
47. Weiss, M. S., Anderson, D. H., Raffioni, S., Bradshaw, R. A., Ortenzi, C., Luponni, P. and Eisenberg, D. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 10172-10176
48. Wilmanns, M. and Nilges, M. (1996) Acta Crystallogr. D52, 973-982
49. Thunnissen, M. M. G. M., Taddei, N., Liguri, G., Ramponi, G. and Nordlund, P. (1997) Structure 5, 69-79
50. Wallis, R., Moore, G. R., Kleanthous, C. and James, R. (1992) Eur. J. Biochem. 210, 923-930
51. Wallis, R., Leung, K.-Y., Osborne, M. J., James, R., Moore, G. R. and Kleanthous, C. (1998) Biochemistry 37, 476-485
52. Ferscht, A. R. and Serrano, L. (1993) Curr. Opin. Struct. Biol. 3, 75-83
53. Schreiber, G. and Fersht, A. R. (1993) Biochemistry 32, 5145-5150