메뉴 건너뛰기




Volumn 56, Issue 5, 2003, Pages 527-539

Evolution of chromatin-remodeling complexes: Comparative genomics reveals the ancient origin of "novel" compensasome genes

Author keywords

Chromatin; Comparative genomics; Dosage compensation; Enhancer of Zeste

Indexed keywords

COMPENSASOME; LEUCINE ZIPPER PROTEIN; MSL 1 PROTEIN; MSL 2 PROTEIN; MSLS PROTEIN; PROTEIN; UNCLASSIFIED DRUG;

EID: 0037403653     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-002-2422-1     Document Type: Article
Times cited : (42)

References (48)
  • 2
    • 0033567954 scopus 로고    scopus 로고
    • NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p
    • Allard S, Utley RT, Savard J, Clarke A, Grant P, Brandl CJ, Pillus L, Workman JL, Côté J (1999) NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p. EMBO J 18:5108-5119
    • (1999) EMBO J , vol.18 , pp. 5108-5119
    • Allard, S.1    Utley, R.T.2    Savard, J.3    Clarke, A.4    Grant, P.5    Brandl, C.J.6    Pillus, L.7    Workman, J.L.8    Côté, J.9
  • 5
    • 0028885520 scopus 로고
    • The msl-2 dosage compensation gene of Drosophila encodes a putative DNA-binding protein whose expression is sex specifically regulated by Sex-lethal
    • Bashaw GJ, Baker BS (1995) The msl-2 dosage compensation gene of Drosophila encodes a putative DNA-binding protein whose expression is sex specifically regulated by Sex-lethal. Development 121:33245-33258
    • (1995) Development , vol.121 , pp. 33245-33258
    • Bashaw, G.J.1    Baker, B.S.2
  • 7
    • 0028009294 scopus 로고
    • Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila
    • Bone JR, Lavender J, Richman R, Palmer MJ, Turner BM, Kuroda MI (1994) Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila, Genes Dev 8:96-104
    • (1994) Genes Dev , vol.8 , pp. 96-104
    • Bone, J.R.1    Lavender, J.2    Richman, R.3    Palmer, M.J.4    Turner, B.M.5    Kuroda, M.I.6
  • 8
    • 0034070298 scopus 로고    scopus 로고
    • The human EZH2 gene: Genomic organisation and revised mapping in 7q35 within the critical region for malignant myeloid disorders
    • Cardoso C, Mignon C, Hetet G, Grandchamps B, Fontes M, Colleaux L (2000) The human EZH2 gene: Genomic organisation and revised mapping in 7q35 within the critical region for malignant myeloid disorders. Eur J Hum Genet 8:174-180
    • (2000) Eur J Hum Genet , vol.8 , pp. 174-180
    • Cardoso, C.1    Mignon, C.2    Hetet, G.3    Grandchamps, B.4    Fontes, M.5    Colleaux, L.6
  • 9
    • 0030478780 scopus 로고    scopus 로고
    • The Drosophila Enhancer of zeste gene encodes a chromosomal protein: Examination of wild-type and mutant protein distribution
    • Carrington EA, Jones RS (1996) The Drosophila Enhancer of zeste gene encodes a chromosomal protein: Examination of wild-type and mutant protein distribution. Development 122:4073-4083
    • (1996) Development , vol.122 , pp. 4073-4083
    • Carrington, E.A.1    Jones, R.S.2
  • 10
    • 0031716947 scopus 로고    scopus 로고
    • Modulation of MSL1 abundance in female Drosophila contributes to the sex specificity of dosage compensation
    • Chang KA, Kuroda MI (1998) Modulation of MSL1 abundance in female Drosophila contributes to the sex specificity of dosage compensation. Genetics 150:699-709
    • (1998) Genetics , vol.150 , pp. 699-709
    • Chang, K.A.1    Kuroda, M.I.2
  • 11
    • 0030588658 scopus 로고    scopus 로고
    • Cloning of a human homolog of the Drosophila enhancer of zeste gene (EZH2) that maps to chromosome 21q22.2
    • Chen H, Rossier C, Antonarakis SE (1996) Cloning of a human homolog of the Drosophila enhancer of zeste gene (EZH2) that maps to chromosome 21q22.2. Genomics 38:30-37
    • (1996) Genomics , vol.38 , pp. 30-37
    • Chen, H.1    Rossier, C.2    Antonarakis, S.E.3
  • 12
    • 0030300044 scopus 로고    scopus 로고
    • Vive la différence: Males vs. females in flies and worms
    • Cline TW, Meyer BJ (1996) Vive la différence: Males vs. females in flies and worms. Annu Rev Genet 30:637-702
    • (1996) Annu Rev Genet , vol.30 , pp. 637-702
    • Cline, T.W.1    Meyer, B.J.2
  • 13
    • 0032530393 scopus 로고    scopus 로고
    • Complex formation by the Drosophila MSL proteins: Role of the MSL2 RING finger in protein complex assembly
    • Copps K, Richman R, Lyman LM, Chang KA, Rampersad-Ammons J, Kuroda MI (1998) Complex formation by the Drosophila MSL proteins: Role of the MSL2 RING finger in protein complex assembly. EMBO J 17:5409-5417
    • (1998) EMBO J , vol.17 , pp. 5409-5417
    • Copps, K.1    Richman, R.2    Lyman, L.M.3    Chang, K.A.4    Rampersad-Ammons, J.5    Kuroda, M.I.6
  • 14
    • 0035793642 scopus 로고    scopus 로고
    • The yeast NuA4 and Drosophila MSL complexes contain homologous subunits important for transcriptional regulation
    • Eisen A, Utley RT, Nourani A, Allard S, Schmidt P, Lane WS, Lucchesi JC, Côté J (2001) The yeast NuA4 and Drosophila MSL complexes contain homologous subunits important for transcriptional regulation. J Biol Chem 276:3484-3491
    • (2001) J Biol Chem , vol.276 , pp. 3484-3491
    • Eisen, A.1    Utley, R.T.2    Nourani, A.3    Allard, S.4    Schmidt, P.5    Lane, W.S.6    Lucchesi, J.C.7    Côté, J.8
  • 17
    • 0032540508 scopus 로고    scopus 로고
    • Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis
    • Grossniklaus U, Vielle-Calzada JP, Hoeppner MA, Gagliano WB (1998) Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis. Science 280:446-450
    • (1998) Science , vol.280 , pp. 446-450
    • Grossniklaus, U.1    Vielle-Calzada, J.P.2    Hoeppner, M.A.3    Gagliano, W.B.4
  • 18
    • 0031917787 scopus 로고    scopus 로고
    • Targeting of MOF, a putative histone acetyl transferase, to the X chromosome of Drosophila melanogaster
    • Gu W, Szauter P, Lucchesi JC (1998) Targeting of MOF, a putative histone acetyl transferase, to the X chromosome of Drosophila melanogaster. Dev. Genet 22:56-64
    • (1998) Dev. Genet , vol.22 , pp. 56-64
    • Gu, W.1    Szauter, P.2    Lucchesi, J.C.3
  • 19
    • 0034124788 scopus 로고    scopus 로고
    • TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis
    • Hauser BA, He JQ, Park SO, Gasser CS (2000) TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis. Development 127:2219-2228
    • (2000) Development , vol.127 , pp. 2219-2228
    • Hauser, B.A.1    He, J.Q.2    Park, S.O.3    Gasser, C.S.4
  • 20
    • 0030891858 scopus 로고    scopus 로고
    • mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila
    • Hilfiker A, Hilfiker-Kleiner D, Pannuti A, Lucchesi JC (1997) mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila. EMBO J 16:2054-2060
    • (1997) EMBO J , vol.16 , pp. 2054-2060
    • Hilfiker, A.1    Hilfiker-Kleiner, D.2    Pannuti, A.3    Lucchesi, J.C.4
  • 21
    • 0029899685 scopus 로고    scopus 로고
    • Interaction of Vav with ENX-1, a putative transcriptional regulator of homeobox gene expression
    • Hobert O, Jallal B, Ullrich A (1996a) Interaction of Vav with ENX-1, a putative transcriptional regulator of homeobox gene expression. Mol Cell Biol 16:3066-3073
    • (1996) Mol Cell Biol , vol.16 , pp. 3066-3073
    • Hobert, O.1    Jallal, B.2    Ullrich, A.3
  • 22
    • 0029922115 scopus 로고    scopus 로고
    • Isolation and developmental expression analysis of Enx-1, a novel mouse Polycomb group gene
    • Hobert O, Sures I, Ciossek T, Fuchs M, Ullrich A (1996b) Isolation and developmental expression analysis of Enx-1, a novel mouse Polycomb group gene. Mech Dev 55:171-184
    • (1996) Mech Dev , vol.55 , pp. 171-184
    • Hobert, O.1    Sures, I.2    Ciossek, T.3    Fuchs, M.4    Ullrich, A.5
  • 23
    • 0031903190 scopus 로고    scopus 로고
    • MES-2, a maternal protein essential for viability of the germline in Caenorhabditis elegans, is homologous to a Drosophila Polycomb group protein
    • Holdeman R, Nehrt S, Strome S (1998) MES-2, a maternal protein essential for viability of the germline in Caenorhabditis elegans, is homologous to a Drosophila Polycomb group protein. Development 125:2457-2467
    • (1998) Development , vol.125 , pp. 2457-2467
    • Holdeman, R.1    Nehrt, S.2    Strome, S.3
  • 25
    • 0034729334 scopus 로고    scopus 로고
    • JIL-1, a chromosomal kinase implicated in regulation of chromatin structure, associates with the male specific lethal (MSL) dosage compensation complex
    • Jin Y, Wang Y, Johansen J, Johansen KM (2000) JIL-1, a chromosomal kinase implicated in regulation of chromatin structure, associates with the male specific lethal (MSL) dosage compensation complex. J Cell Biol 149:1005-1010
    • (2000) J Cell Biol , vol.149 , pp. 1005-1010
    • Jin, Y.1    Wang, Y.2    Johansen, J.3    Johansen, K.M.4
  • 26
    • 0027445713 scopus 로고
    • The Drosophila polycomb-group gene Enhancer of zeste contains a region with sequence similarity to trithorax
    • Jones RS, Gelbart WM (1993) The Drosophila polycomb-group gene Enhancer of zeste contains a region with sequence similarity to trithorax. Mol Cell Biol 13:6357-6366
    • (1993) Mol Cell Biol , vol.13 , pp. 6357-6366
    • Jones, R.S.1    Gelbart, W.M.2
  • 27
    • 0033858166 scopus 로고    scopus 로고
    • The role of chromosomal RNAs in marking the X for dosage compensation
    • Kelley RL, Kuroda MI (2000) The role of chromosomal RNAs in marking the X for dosage compensation. Curr Opin Genet Dev 10:555-561
    • (2000) Curr Opin Genet Dev , vol.10 , pp. 555-561
    • Kelley, R.L.1    Kuroda, M.I.2
  • 28
    • 0030782516 scopus 로고    scopus 로고
    • Drosophila male-specific lethal-2 protein: Structure/function analysis and dependence on MSL-1 for chromosome association
    • Lyman LM, Copps K, Rastelli L, Kelley RL, Kuroda MI (1997) Drosophila male-specific lethal-2 protein: Structure/function analysis and dependence on MSL-1 for chromosome association. Genetics 147:1743-1753
    • (1997) Genetics , vol.147 , pp. 1743-1753
    • Lyman, L.M.1    Copps, K.2    Rastelli, L.3    Kelley, R.L.4    Kuroda, M.I.5
  • 29
    • 0033868471 scopus 로고    scopus 로고
    • Origin and evolution of the regulatory gene male-specific letha-3
    • Marín I, Baker BS (2000) Origin and evolution of the regulatory gene male-specific letha-3. Mol Biol Evol 17:1240-1250
    • (2000) Mol Biol Evol , vol.17 , pp. 1240-1250
    • Marín, I.1    Baker, B.S.2
  • 30
    • 0029808078 scopus 로고    scopus 로고
    • The dosage compensation system of Drosophila is co-opted by newly evolved X chromosomes
    • Marín I, Franke A, Bashaw GJ, Baker BS (1996) The dosage compensation system of Drosophila is co-opted by newly evolved X chromosomes. Nature 383:160-163
    • (1996) Nature , vol.383 , pp. 160-163
    • Marín, I.1    Franke, A.2    Bashaw, G.J.3    Baker, B.S.4
  • 31
    • 0034547524 scopus 로고    scopus 로고
    • The evolution of dosage compensation mechanisms
    • Marín I, Siegal M, Baker BS (2000) The evolution of dosage compensation mechanisms. Bioessays 22:1106-1114
    • (2000) Bioessays , vol.22 , pp. 1106-1114
    • Marín, I.1    Siegal, M.2    Baker, B.S.3
  • 32
    • 0034195219 scopus 로고    scopus 로고
    • Sex in the worm. Counting and compensating X-chromosome dose
    • Meyer BJ (2000) Sex in the worm. Counting and compensating X-chromosome dose. Trends Genet 16:247-253
    • (2000) Trends Genet , vol.16 , pp. 247-253
    • Meyer, B.J.1
  • 33
    • 0034738923 scopus 로고    scopus 로고
    • Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro
    • Nagase T, Kikuno R, Nakayama M, Hirosawa M, Ohara O (2000) Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res 7:273-281
    • (2000) DNA Res , vol.7 , pp. 273-281
    • Nagase, T.1    Kikuno, R.2    Nakayama, M.3    Hirosawa, M.4    Ohara, O.5
  • 34
    • 0033973262 scopus 로고    scopus 로고
    • A new human member of the MYST family of histone acetyl transferases with high sequence similarity to Drosophila MOF
    • Neal KC, Pannuti A, Smith ER, Lucchesi JC (2000) A new human member of the MYST family of histone acetyl transferases with high sequence similarity to Drosophila MOF. Biochim Biophys Acta 1490:170-174
    • (2000) Biochim Biophys Acta , vol.1490 , pp. 170-174
    • Neal, K.C.1    Pannuti, A.2    Smith, E.R.3    Lucchesi, J.C.4
  • 36
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic tress on personal computers
    • Page RDM (1996) TREEVIEW: An application to display phylogenetic tress on personal computers. CABIOS 12:357-358
    • (1996) CABIOS , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 37
    • 0027232086 scopus 로고
    • The male-specific lethal-one (msl-1) gene of Drosophila melanogaster encodes a novel protein that associates with the X chromosome in males
    • Palmer MJ, Mergner VA, Richman R, Manning JE, Kuroda MI, Lucchesi JC (1993) The male-specific lethal-one (msl-1) gene of Drosophila melanogaster encodes a novel protein that associates with the X chromosome in males. Genetics 134:545-557
    • (1993) Genetics , vol.134 , pp. 545-557
    • Palmer, M.J.1    Mergner, V.A.2    Richman, R.3    Manning, J.E.4    Kuroda, M.I.5    Lucchesi, J.C.6
  • 38
    • 0033669623 scopus 로고    scopus 로고
    • Recycling to remodel: Evolution of dosage-compensation complexes
    • Pannuti A, Lucchesi JC (2000) Recycling to remodel: Evolution of dosage-compensation complexes. Curr Opin Genet Dev 10:644-650
    • (2000) Curr Opin Genet Dev , vol.10 , pp. 644-650
    • Pannuti, A.1    Lucchesi, J.C.2
  • 39
    • 0037184965 scopus 로고    scopus 로고
    • MRG15, a novel chromodomain protein, is present in two distinct multiprotein complexes involved in transcriptional activation
    • Pardo PS, Leung JK, Lucchesi JC, Pereira-Smith OM (2002) MRG15, a novel chromodomain protein, is present in two distinct multiprotein complexes involved in transcriptional activation. J Biol Chem 277:50860-50866
    • (2002) J Biol Chem , vol.277 , pp. 50860-50866
    • Pardo, P.S.1    Leung, J.K.2    Lucchesi, J.C.3    Pereira-Smith, O.M.4
  • 40
    • 0034528883 scopus 로고    scopus 로고
    • Evolution of dosage compensation in Diptera: The gene male-less implements dosage compensation in Drosophila (Brachycera suborder) but its homolog in Sciara (Nematocera suborder) appears to play no role in dosage compensation
    • Ruiz MF, Esteban MR, Donoro C, Goday C, Sanchez L (2000) Evolution of dosage compensation in Diptera: The gene male-less implements dosage compensation in Drosophila (Brachycera suborder) but its homolog in Sciara (Nematocera suborder) appears to play no role in dosage compensation. Genetics 156:1853-1865
    • (2000) Genetics , vol.156 , pp. 1853-1865
    • Ruiz, M.F.1    Esteban, M.R.2    Donoro, C.3    Goday, C.4    Sanchez, L.5
  • 41
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 42
    • 0035103789 scopus 로고    scopus 로고
    • Tracing the origin of the compensasome: Evolutionary history of DEAH helicase and MYST acetyltransferase gene families
    • Sanjuán R, Marín I (2001) Tracing the origin of the compensasome: Evolutionary history of DEAH helicase and MYST acetyltransferase gene families. Mol Biol Evol 18:330-343
    • (2001) Mol Biol Evol , vol.18 , pp. 330-343
    • Sanjuán, R.1    Marín, I.2
  • 43
    • 0033988212 scopus 로고    scopus 로고
    • The Drosophila MSL complex acetylates histone H4 at lysine 16, a chromatin modification linked to dosage compensation
    • Smith ER, Pannuti A, Gu W, Steurnagel A, Cook RG, Allis CD, Lucchesi JC (2000) The Drosophila MSL complex acetylates histone H4 at lysine 16, a chromatin modification linked to dosage compensation. Mol Cell Biol 20:312-318
    • (2000) Mol Cell Biol , vol.20 , pp. 312-318
    • Smith, E.R.1    Pannuti, A.2    Gu, W.3    Steurnagel, A.4    Cook, R.G.5    Allis, C.D.6    Lucchesi, J.C.7
  • 44
    • 0034083196 scopus 로고    scopus 로고
    • Regulation of meristem organization and cell division by TSO1, and Arabidopsis gene with cysteine-rich repeats
    • Song JY, Leung T, Ehler LK, Wang C, Liu Z (2000) Regulation of meristem organization and cell division by TSO1, and Arabidopsis gene with cysteine-rich repeats. Development 127:2207-2217
    • (2000) Development , vol.127 , pp. 2207-2217
    • Song, J.Y.1    Leung, T.2    Ehler, L.K.3    Wang, C.4    Liu, Z.5
  • 45
    • 0032964297 scopus 로고    scopus 로고
    • Blast 2 sequences - A new tool for comparing protein and nucleotide sequences
    • Tatusova TA, Madden TL (1999) Blast 2 sequences - A new tool for comparing protein and nucleotide sequences. FEMS Microbiol Lett 174:247-250
    • (1999) FEMS Microbiol Lett , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 46
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignments aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: Flexible strategies for multiple sequence alignments aided by quality analysis tools. Nucleic Acids Res 24:4876-4882
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 47
    • 0026566417 scopus 로고
    • Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei
    • Turner BM, Birley AJ, Lavender J (1992) Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei. Cell 69:375-384
    • (1992) Cell , vol.69 , pp. 375-384
    • Turner, B.M.1    Birley, A.J.2    Lavender, J.3
  • 48
    • 0029067981 scopus 로고
    • Male-specific lethal 2, a dosage compensation gene of Drosophila, undergoes sex-specific regulation and encodes a protein with a RING finger and a metallothionein-like cysteine cluster
    • Zhou S, Yang Y, Scott MJ, Pannuti A, Fehr KC, Eisen A, Koonin EV, Fouts DL, Wrightsman R, Manning JE, Lucchesi JC (1995) Male-specific lethal 2, a dosage compensation gene of Drosophila, undergoes sex-specific regulation and encodes a protein with a RING finger and a metallothionein-like cysteine cluster. EMBO J 14:2884-2895
    • (1995) EMBO J , vol.14 , pp. 2884-2895
    • Zhou, S.1    Yang, Y.2    Scott, M.J.3    Pannuti, A.4    Fehr, K.C.5    Eisen, A.6    Koonin, E.V.7    Fouts, D.L.8    Wrightsman, R.9    Manning, J.E.10    Lucchesi, J.C.11


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.