메뉴 건너뛰기




Volumn 69, Issue 1, 2003, Pages 320-326

Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts

Author keywords

[No Author keywords available]

Indexed keywords

COENZYMES; DNA; FLUORESCENCE; RNA;

EID: 0037225001     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.69.1.320-326.2003     Document Type: Article
Times cited : (276)

References (50)
  • 1
    • 0027995162 scopus 로고
    • A molecular technique for identification of bacteria with small subunit ribosomal RNA sequences
    • Avaniss-Aghajani, E., K. Jones, D. Chapman, and C. Brunk. 1994. A molecular technique for identification of bacteria with small subunit ribosomal RNA sequences. BioTechniques 17:144-149.
    • (1994) BioTechniques , vol.17 , pp. 144-149
    • Avaniss-Aghajani, E.1    Jones, K.2    Chapman, D.3    Brunk, C.4
  • 2
    • 0029941934 scopus 로고    scopus 로고
    • Rapid, direct extraction of DNA from soils for PCR analysis with polyvinylpolypyrrolidone spin columns
    • Berthelet, M., L. G. Whyte, and C. W. Greer. 1996. Rapid, direct extraction of DNA from soils for PCR analysis with polyvinylpolypyrrolidone spin columns. FEMS Microbiol. Lett. 138:17-22.
    • (1996) FEMS Microbiol. Lett. , vol.138 , pp. 17-22
    • Berthelet, M.1    Whyte, L.G.2    Greer, C.W.3
  • 3
    • 0035319656 scopus 로고    scopus 로고
    • Community structure of denitrifiers, Bacteria, and Archaea along redox gradients in pacific northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes
    • Braker, G., H. L. Ayala-del-Rio, A. H. Devol, A. Fesefeldt, and J. M. Tiedje. 2001. Community structure of denitrifiers, Bacteria, and Archaea along redox gradients in pacific northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes. Appl. Environ. Microbiol. 67:1893-1901.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 1893-1901
    • Braker, G.1    Ayala-del-Rio, H.L.2    Devol, A.H.3    Fesefeldt, A.4    Tiedje, J.M.5
  • 4
    • 0030817782 scopus 로고    scopus 로고
    • Analysis of met gene subclasses within bacterial communities in soils and sediments resolved by fluorescent-PCR-restriction fragment length polymorphism profiling
    • Bruce, K. D. 1997. Analysis of met gene subclasses within bacterial communities in soils and sediments resolved by fluorescent-PCR-restriction fragment length polymorphism profiling. Appl. Environ. Microbiol. 63:4914-4919.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4914-4919
    • Bruce, K.D.1
  • 5
    • 0031792327 scopus 로고    scopus 로고
    • Quantitative measure of small-subunit rRNA gene sequences of the kingdom Korarchaeota
    • Brunk, C. F., and N. Eis. 1998. Quantitative measure of small-subunit rRNA gene sequences of the kingdom Korarchaeota. Appl. Environ. Microbiol. 64:5064-5066.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 5064-5066
    • Brunk, C.F.1    Eis, N.2
  • 7
    • 0035984122 scopus 로고    scopus 로고
    • Changes in archaeal, bacterial, and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern
    • Casamayor, E. O., R. Massana, S. Benlloch, L. Ovreas, B. Diez, V. J. Goddard, J. M. Gasol, et al. 2002. Changes in archaeal, bacterial, and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern. Environ. Microbiol. 4:338-348.
    • (2002) Environ. Microbiol. , vol.4 , pp. 338-348
    • Casamayor, E.O.1    Massana, R.2    Benlloch, S.3    Ovreas, L.4    Diez, B.5    Goddard, V.J.6    Gasol, J.M.7
  • 8
    • 0033012295 scopus 로고    scopus 로고
    • Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil
    • Chin, K. J., T. Lukow, and R. Conrad. 1999. Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil. Appl. Environ. Microbiol. 65:2341-2349.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 2341-2349
    • Chin, K.J.1    Lukow, T.2    Conrad, R.3
  • 9
    • 0031882598 scopus 로고    scopus 로고
    • Terminal restriction fragment patterns (TRFPs), a rapid, PCR-based method for the comparison of complex bacterial communities
    • Clement, B. G., L. E. Kehl, K. L. DeBord, and C. L. Kitts. 1998. Terminal restriction fragment patterns (TRFPs), a rapid, PCR-based method for the comparison of complex bacterial communities. J. Microbiol. Methods 31:135-142.
    • (1998) J. Microbiol. Methods , vol.31 , pp. 135-142
    • Clement, B.G.1    Kehl, L.E.2    DeBord, K.L.3    Kitts, C.L.4
  • 10
    • 0034038056 scopus 로고    scopus 로고
    • Isolating PCR-quality DNA from human feces with a soil DNA kit
    • Clement, B. G., and C. L. Kitts. 2000. Isolating PCR-quality DNA from human feces with a soil DNA kit. BioTechniques 28:640-642, 644-646.
    • (2000) BioTechniques , vol.28 , pp. 640-642
    • Clement, B.G.1    Kitts, C.L.2
  • 11
    • 0035671875 scopus 로고    scopus 로고
    • Interpreting 16S rDNA T-RFLP data: Application of self-organizing maps and principal component analysis to describe community dynamics and convergence
    • Dollhopf, S. L., S. A. Hashsham, and J. Tiedje. 2001. Interpreting 16S rDNA T-RFLP data: application of self-organizing maps and principal component analysis to describe community dynamics and convergence. Microb. Ecol. 42:495-505.
    • (2001) Microb. Ecol. , vol.42 , pp. 495-505
    • Dollhopf, S.L.1    Hashsham, S.A.2    Tiedje, J.3
  • 12
    • 0033941482 scopus 로고    scopus 로고
    • Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis
    • Dunbar, J., L. O. Ticknor, and C. R. Kuske. 2000. Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis. Appl. Environ. Microbiol. 66:2943-2950.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2943-2950
    • Dunbar, J.1    Ticknor, L.O.2    Kuske, C.R.3
  • 13
    • 0035163587 scopus 로고    scopus 로고
    • Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities
    • Dunbar, J., L. O. Ticknor, and C. R. Kuske. 2001. Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities. Appl. Environ. Microbiol. 67:190-197.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 190-197
    • Dunbar, J.1    Ticknor, L.O.2    Kuske, C.R.3
  • 14
    • 0029032318 scopus 로고
    • Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species
    • Farrelly, V., F. A. Rainey, and E. Stackebrandt. 1995. Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl. Environ. Microbiol. 61:2798-2801.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2798-2801
    • Farrelly, V.1    Rainey, F.A.2    Stackebrandt, E.3
  • 15
    • 0032876852 scopus 로고    scopus 로고
    • Prokaryotic genome size and SSU rDNA copy number: Estimation of microbial relative abundance from a mixed population
    • Fogel, G. B., C. R. Collins, J. Li, and C. F. Brunk. 1999. Prokaryotic genome size and SSU rDNA copy number: estimation of microbial relative abundance from a mixed population. Microb. Ecol. 38:93-113.
    • (1999) Microb. Ecol. , vol.38 , pp. 93-113
    • Fogel, G.B.1    Collins, C.R.2    Li, J.3    Brunk, C.F.4
  • 16
    • 2542508293 scopus 로고    scopus 로고
    • Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval
    • Grosskopf, R., P. H. Janssen, and W. Liesack. 1998. Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval. Appl. Environ. Microbiol. 64:960-969.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 960-969
    • Grosskopf, R.1    Janssen, P.H.2    Liesack, W.3
  • 17
    • 0031842162 scopus 로고    scopus 로고
    • Biased 16S rDNA PCR amplification caused by interference from DNA flanking the template region
    • Hansen, M. C., T. Tolker-Nielsen, M. Givskov, and S. Molin. 1998. Biased 16S rDNA PCR amplification caused by interference from DNA flanking the template region. FEMS Microbiol. Ecol. 26:141-149.
    • (1998) FEMS. Microbiol. Ecol. , vol.26 , pp. 141-149
    • Hansen, M.C.1    Tolker-Nielsen, T.2    Givskov, M.3    Molin, S.4
  • 19
    • 0032925877 scopus 로고    scopus 로고
    • Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase
    • Henckel, T., M. Friedrich, and R. Conrad. 1999. Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase. Appl. Environ. Microbiol. 65:1980-1990.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1980-1990
    • Henckel, T.1    Friedrich, M.2    Conrad, R.3
  • 20
    • 0033988391 scopus 로고    scopus 로고
    • Identification of major subgroups of ammonia-oxidizing bacteria in environmental samples by T-RFLP analysis of amoA PCR products
    • Horz, H. P., J. H. Rotthauwe, T. Lukow, and W. Liesack. 2000. Identification of major subgroups of ammonia-oxidizing bacteria in environmental samples by T-RFLP analysis of amoA PCR products. J. Microbiol. Methods 39:197-204.
    • (2000) J. Microbiol. Methods , vol.39 , pp. 197-204
    • Horz, H.P.1    Rotthauwe, J.H.2    Lukow, T.3    Liesack, W.4
  • 21
    • 0035458355 scopus 로고    scopus 로고
    • Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling
    • Horz, H. P., M. T. Yimga, and W. Liesack. 2001. Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling. Appl. Environ. Microbiol. 67:4177-4185.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 4177-4185
    • Horz, H.P.1    Yimga, M.T.2    Liesack, W.3
  • 22
    • 0035040382 scopus 로고    scopus 로고
    • Terminal restriction fragment patterns: A tool for comparing microbial communities and assessing community dynamics
    • Kitts, C. L. 2001. Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics. Curr. Issues Intest. Microbiol 2:17-25.
    • (2001) Curr. Issues Intest. Microbiol. , vol.2 , pp. 17-25
    • Kitts, C.L.1
  • 23
    • 0001093837 scopus 로고    scopus 로고
    • Microbial diversity in soil: The need for a combined approach with molecular and cultivation techniques
    • J. D. van Elsas, J. T. Trevors, and E. M. H. Wellington (ed.). Marcel Dekker Inc., New York, N.Y.
    • Liesack, W., P. H. Janssen, F. A. Rainey, N. L. Ward-Rainey, and E. Stackebrandt. 1997. Microbial diversity in soil: the need for a combined approach with molecular and cultivation techniques, p. 375-439. In J. D. van Elsas, J. T. Trevors, and E. M. H. Wellington (ed.), Modern soil microbiology. Marcel Dekker Inc., New York, N.Y.
    • (1997) Modern Soil Microbiology , pp. 375-439
    • Liesack, W.1    Janssen, P.H.2    Rainey, F.A.3    Ward-Rainey, N.L.4    Stackebrandt, E.5
  • 24
    • 0030661563 scopus 로고    scopus 로고
    • Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
    • Liu, W. T., T. L. Marsh, H. Cheng, and L. J. Forney. 1997. Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl. Environ. Microbiol. 63:4516-4522.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4516-4522
    • Liu, W.T.1    Marsh, T.L.2    Cheng, H.3    Forney, L.J.4
  • 25
    • 0035206819 scopus 로고    scopus 로고
    • Molecular analyses of methyl-coenzyme M reductase α-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage
    • Lueders, T., K. J. Chin, R. Conrad, and M. Friedrich. 2001. Molecular analyses of methyl-coenzyme M reductase α-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage. Environ. Microbiol. 3:194-204.
    • (2001) Environ. Microbiol. , vol.3 , pp. 194-204
    • Lueders, T.1    Chin, K.J.2    Conrad, R.3    Friedrich, M.4
  • 26
    • 0033933786 scopus 로고    scopus 로고
    • Archaeal population dynamics during sequential reduction processes in rice field soil
    • Lueders, T., and M. Friedrich. 2000. Archaeal population dynamics during sequential reduction processes in rice field soil. Appl. Environ. Microbiol. 66:2732-2742.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2732-2742
    • Lueders, T.1    Friedrich, M.2
  • 27
    • 0036253733 scopus 로고    scopus 로고
    • Effects of amendment with ferrihydrite and gypsum on the structure and activity of methanogenic populations in rice field soil
    • Lueders, T., and M. W. Friedrich. 2002. Effects of amendment with ferrihydrite and gypsum on the structure and activity of methanogenic populations in rice field soil. Appl. Environ. Microbiol. 68:2484-2494.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2484-2494
    • Lueders, T.1    Friedrich, M.W.2
  • 28
    • 0034119122 scopus 로고    scopus 로고
    • Use of the T-RFLP technique to assess spatial and temporal changes in the bacterial community structure within an agricultural soil planted with transgenic and non-transgenic potato plants
    • Lukow, T., P. F. Dunfield, and W. Liesack. 2000. Use of the T-RFLP technique to assess spatial and temporal changes in the bacterial community structure within an agricultural soil planted with transgenic and non-transgenic potato plants. FEMS Microbiol. Ecol. 32:241-247.
    • (2000) FEMS Microbiol. Ecol. , vol.32 , pp. 241-247
    • Lukow, T.1    Dunfield, P.F.2    Liesack, W.3
  • 29
    • 0031860407 scopus 로고    scopus 로고
    • Beginning a molecular analysis of the eukaryal community in activated sludge
    • Marsh, T. L., W. T. Liu, L. J. Forney, and H. Cheng. 1998. Beginning a molecular analysis of the eukaryal community in activated sludge. Water Sci. Technol. 37:455-460.
    • (1998) Water Sci. Technol. , vol.37 , pp. 455-460
    • Marsh, T.L.1    Liu, W.T.2    Forney, L.J.3    Cheng, H.4
  • 30
    • 0033868092 scopus 로고    scopus 로고
    • Terminal restriction fragment length polymorphism analysis program, a web-based research tool for microbial community analysis
    • Marsh, T. L., P. Saxman, J. Cole, and J. Tiedje. 2000. Terminal restriction fragment length polymorphism analysis program, a web-based research tool for microbial community analysis. Appl. Environ. Microbiol. 66:3616-3620.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3616-3620
    • Marsh, T.L.1    Saxman, P.2    Cole, J.3    Tiedje, J.4
  • 32
    • 0032812081 scopus 로고    scopus 로고
    • Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis
    • Moeseneder, M. M., J. M. Arrieta, G. Muyzer, C. Winter, and G. J. Herndl. 1999. Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 65:3518-3525.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3518-3525
    • Moeseneder, M.M.1    Arrieta, J.M.2    Muyzer, G.3    Winter, C.4    Herndl, G.J.5
  • 33
    • 0035283902 scopus 로고    scopus 로고
    • Terminal restriction fragment length polymorphism (T-RFLP) screening of a marine archaeal clone library to determine the different phylotypes
    • Moeseneder, M. M., C. Winter, J. M. Arrieta, and G. J. Herndl. 2001. Terminal restriction fragment length polymorphism (T-RFLP) screening of a marine archaeal clone library to determine the different phylotypes. J. Microbiol. Methods 44:159-172.
    • (2001) J. Microbiol. Methods , vol.44 , pp. 159-172
    • Moeseneder, M.M.1    Winter, C.2    Arrieta, J.M.3    Herndl, G.J.4
  • 34
    • 0032755033 scopus 로고    scopus 로고
    • Culture-independent characterization of a gene responsible for nitrogen fixation in the symbiotic microbial community in the gut of the termite Neotermes koshunensis
    • Noda, S., M. Ohkuma, R. Usami, K. Horikoshi, and T. Kudo. 1999. Culture-independent characterization of a gene responsible for nitrogen fixation in the symbiotic microbial community in the gut of the termite Neotermes koshunensis. Appl. Environ. Microbiol. 65:4935-4942.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4935-4942
    • Noda, S.1    Ohkuma, M.2    Usami, R.3    Horikoshi, K.4    Kudo, T.5
  • 35
    • 0032748070 scopus 로고    scopus 로고
    • Phylogenetic diversity of nitrogen fixation genes in the symbiotic microbial community in the gut of diverse termites
    • Ohkuma, M., S. Noda, and T. Kudo. 1999. Phylogenetic diversity of nitrogen fixation genes in the symbiotic microbial community in the gut of diverse termites. Appl. Environ. Microbiol. 65:4926-4934.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4926-4934
    • Ohkuma, M.1    Noda, S.2    Kudo, T.3
  • 36
    • 0034547801 scopus 로고    scopus 로고
    • An evaluation of terminal restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics
    • Osborn, A. M., E. R. B. Moore, and K. N. Timmis. 2000. An evaluation of terminal restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environ. Microbiol. 2:39-50.
    • (2000) Environ. Microbiol. , vol.2 , pp. 39-50
    • Osborn, A.M.1    Moore, E.R.B.2    Timmis, K.N.3
  • 37
    • 0031711754 scopus 로고    scopus 로고
    • Bias in template-to-product ratios in multitemplate PCR
    • Polz, M. F., and C. M. Cavanaugh. 1998. Bias in template-to-product ratios in multitemplate PCR. Appl. Environ. Microbiol. 64:3724-3730.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3724-3730
    • Polz, M.F.1    Cavanaugh, C.M.2
  • 38
    • 0034782286 scopus 로고    scopus 로고
    • Archaeal community structures in rice soils from different geographical regions before and after initiation of methane production
    • Ramakrishnan, B., T. Lueders, P. F. Dunfield, R. Conrad, and M. W. Friedrich. 2001. Archaeal community structures in rice soils from different geographical regions before and after initiation of methane production. FEMS Microbiol. Ecol. 37:175-186.
    • (2001) FEMS Microbiol. Ecol. , vol.37 , pp. 175-186
    • Ramakrishnan, B.1    Lueders, T.2    Dunfield, P.F.3    Conrad, R.4    Friedrich, M.W.5
  • 39
    • 1842329756 scopus 로고    scopus 로고
    • Methanogenesis: Genes, genomes, and who's on first?
    • Reeve, J. N., J. Nölling, R. M. Morgan, and D. R. Smith. 1997. Methanogenesis: genes, genomes, and who's on first? J. Bacteriol. 179:5975-5986.
    • (1997) J. Bacteriol. , vol.179 , pp. 5975-5986
    • Reeve, J.N.1    Nölling, J.2    Morgan, R.M.3    Smith, D.R.4
  • 41
    • 0034071156 scopus 로고    scopus 로고
    • Horizontal heterogeneity of denitrifying bacterial communities in marine sediments by terminal restriction fragment length polymorphism analysis
    • Scala, D. J., and L. J. Kerkhof. 2000. Horizontal heterogeneity of denitrifying bacterial communities in marine sediments by terminal restriction fragment length polymorphism analysis. Appl. Environ. Microbiol. 66:1980-1986.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 1980-1986
    • Scala, D.J.1    Kerkhof, L.J.2
  • 42
    • 0029068827 scopus 로고
    • Partial gene-sequences for the α-subunit of methyl-coenzyme M reductase (MCRI) as a phylogenetic tool for the family Methanosarcinaceae
    • Springer, E., M. S. Sachs, C. R. Woese, and D. R. Boone. 1995. Partial gene-sequences for the α-subunit of methyl-coenzyme M reductase (MCRI) as a phylogenetic tool for the family Methanosarcinaceae. Int. J. Syst. Bacteriol. 45:554-559.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 554-559
    • Springer, E.1    Sachs, M.S.2    Woese, C.R.3    Boone, D.R.4
  • 43
    • 0003341851 scopus 로고
    • Development and application of nucleic acid probes
    • E. Stackebrandt and M. Goodfellow (ed.). John Wiley & Sons Ltd., Chichester, England
    • Stahl, D. A., and R. Amann. 1991. Development and application of nucleic acid probes, p. 205-248. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley & Sons Ltd., Chichester, England.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 205-248
    • Stahl, D.A.1    Amann, R.2
  • 44
    • 0031790538 scopus 로고    scopus 로고
    • Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity
    • Suzuki, M., M. S. Rappe, and S. J. Giovannoni. 1998. Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity. Appl. Environ. Microbiol. 64:4522-4529.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4522-4529
    • Suzuki, M.1    Rappe, M.S.2    Giovannoni, S.J.3
  • 45
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki, M. T., and S. J. Giovannoni. 1996. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62:625-630.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovannoni, S.J.2
  • 46
    • 0033760479 scopus 로고    scopus 로고
    • Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5′-nuclease assays
    • Suzuki, M. T., L. T. Taylor, and E. F. DeLong. 2000. Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5′-nuclease assays. Appl. Environ. Microbiol. 66:4605-4614.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4605-4614
    • Suzuki, M.T.1    Taylor, L.T.2    DeLong, E.F.3
  • 47
    • 0036099682 scopus 로고    scopus 로고
    • Adaption of a fragment analysis technique to an automated high-throughput multicapillary electrophoresis device for the precise qualitative and quantitative characterization of microbial communities
    • Trotha, R., U. Reichl, F. L. Thies, D. Sperling, W. Konig, and B. Konig. 2002. Adaption of a fragment analysis technique to an automated high-throughput multicapillary electrophoresis device for the precise qualitative and quantitative characterization of microbial communities. Electrophoresis 23:1070-1079.
    • (2002) Electrophoresis , vol.23 , pp. 1070-1079
    • Trotha, R.1    Reichl, U.2    Thies, F.L.3    Sperling, D.4    Konig, W.5    Konig, B.6
  • 49
    • 0345195995 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
    • von Wintzingerode, F., U. B. Göbel, and E. Stackebrandt. 1997. Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol. Rev. 21:213-229.
    • (1997) FEMS Microbiol. Rev. , vol.21 , pp. 213-229
    • Von Wintzingerode, F.1    Göbel, U.B.2    Stackebrandt, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.