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Biochemistry

Volumn 41, Issue 12, 2002, Pages 4088-4095

Indirect readout of the trp-repressor - Operator complex by B-DNA's backbone conformation transitions

(6) Wellenzohn, Bernd a Flader, Wolfgang a Winger, Rudolf H a Hallbrucker, Andreas a Mayer, Erwin a Liedl, Klaus R a

a UNIVERSITY OF INNSBRUCK (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL SYSTEMS;

COMPLEXATION; COMPUTER SIMULATION; CONFORMATIONS; CRYSTALLOGRAPHY; HYDROGEN BONDS; MOLECULAR DYNAMICS; PHASE TRANSITIONS; PROTEINS;

DNA;

DNA B; PHOSPHATE; REPRESSOR PROTEIN;

ARTICLE; CONFORMATIONAL TRANSITION; DNA CONFORMATION; DNA PROTEIN COMPLEX; ESCHERICHIA COLI; HYDROGEN BOND; MOLECULAR DYNAMICS; PRIORITY JOURNAL; TRANSCRIPTION REGULATION; X RAY CRYSTALLOGRAPHY;

BACTERIAL PROTEINS; CRYSTALLOGRAPHY, X-RAY; DNA; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; OPERATOR REGIONS (GENETICS); OXYGEN; REPRESSOR PROTEINS;

ESCHERICHIA COLI;

EID: 0037177251 PISSN: 00062960 EISSN: None Source Type: Journal
DOI: 10.1021/bi015642t Document Type: Article

Times cited : (25)

References (58)

1
- 0024286247
- (1988) Science , vol.242 , pp. 240-244
- Bass, S.¹ Sorrells, V.² Youderian, P.³

2
- 0024961720
- (1989) J. Biol. Chem. , vol.264 , pp. 1941-1945
- Carey, J.¹

3
- 0026035470
- (1991) Biochemistry , vol.30 , pp. 1141-1148
- Marmorstein, R.Q.¹ Sprinzl, M.² Sigler, P.B.³

4
- 0026652596
- (1992) EMBO J. , vol.11 , pp. 3021-3030
- Haran, T.E.¹ Joachimiak, A.² Sigler, P.B.³

5
- 0024294634
- (1988) Nature , pp. 321-329
- Otwinowski, Z.¹ Schevitz, R.W.² Zhang, R.-G.³ Lawson, C.L.⁴ Joachimiak, A.⁵ Marmorstein, R.Q.⁶ Luisi, B.F.⁷ Sigler, P.B.⁸

6
- 0027370156
- (1993) J. Biol. Chem. , vol.268 , pp. 23239-23249
- Liu, Y.-C.¹ Matthews, K.S.²

7
- 0027372621
- (1993) Nature , vol.366 , pp. 178-182
- Lawson, L.L.¹ Carey, J.²

8
- 0028286761
- (1994) J. Mol. Biol. , vol.238 , pp. 592-614
- Zhang, H.¹ Zhao, D.² Revington, M.³ Lee, W.⁴ Jia, X.⁵ Arrowsmith, C.⁶ Jardetzky, O.⁷

9
- 0004216330
- ACS, Washington
- (1994) Modeling the Hydrogen Bond
- Smith, D.A.¹

10
- 0026710960
- (1992) Biochemistry , vol.31 , pp. 5925-5936
- Mazzarelli, J.M.¹ Rajur, S.B.² Iadarola, P.L.³ McLaughlin, L.W.⁴

11
- 0028157348
- (1994) EMBO J. , vol.13 , pp. 367-372
- Joachamiak, A.¹ Haran, T.E.² Sigler, P.B.³

12
- 0032540302
- (1998) J. Mol. Biol. , vol.277 , pp. 1071-1080
- Bareketh-Samish, A.¹ Cohen, I.² Haran, T.E.³

13
- 2542609960
- (1998) Biopolymers (Nucleic Acid Sci.) , vol.44 , pp. 361-403
- Dickerson, R.E.¹ Chiu, T.K.²

14
- 0030717552
- (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 12845-12850
- Giese, K.¹ Pagel, J.² Grosschedl, R.³

15
- 0029930225
- (1996) Biochemstry , vol.35 , pp. 3845-3848
- Shi, Y.¹ Berg, J.M.²

16
- 0028210087
- (1994) Science , vol.263 , pp. 769-770
- Von Hippel, P.H.¹

17
- 0033515527
- (1999) J. Mol. Biol. , vol.287 , pp. 539-554
- Grillo, A.O.¹ Brown, M.P.² Royer, C.A.³

18
- 0028315988
- (1994) Nature , vol.368 , pp. 469-473
- Shakked, Z.¹ Guzikevich-Guerstein, G.² Frolow, F.³ Rabinovich, D.⁴ Joachimiak, A.⁵ Sigler, P.B.⁶

19
- 0003436941
- Cambridge University Press, Cambridge, UK
- (1993) Structural Studies of Protein-Nucleic Acid Interaction
- Steitz, T.A.¹

20
- 0003776015
- Oxford University Press, Oxford, UK
- (1995) DNA - Protein: Structural Interactions
- Lilley, D.M.J.¹

21
- 0004237837
- Chapman & Hall, London, UK
- (1993) DNA - Protein Interactions
- Travers, A.¹

22
- 0031830815
- (1998) Annu. Rev. Biophys. Biophys. Chem. , vol.27 , pp. 105-131
- Bewley, C.A.¹ Grinenborn, A.M.² Clore, G.M.³

23
- 0031964687
- (1998) Nat. Struct. Biol. , vol.5 , pp. 67-73
- Chen, Y.-Q.¹ Gosh, S.² Gosh, G.³

24
- 0028118685
- (1994) Curr. Opin. Struct. Biol. , vol.4 , pp. 12-21
- Ellenberger, T.¹

25
- 0031424230
- (1997) Biopolymers (Nucleic Acid Sci.) , vol.44 , pp. 105-121
- Neidle, S.¹

26
- 0026682657
- (1992) Annu. Rev. Biochem. , vol.61 , pp. 1053-1095
- Pabo, C.O.¹ Sauer, R.T.²

27
- 0030922055
- (1997) Biochemistry , vol.36 , pp. 6046-6058
- Smith, S.A.¹ McLaughlin, L.W.²

28
- 0026487068
- (1992) J. Biol. Chem. , vol.267 , pp. 24810-23818
- Lesser, D.R.¹ Grajkowski, A.² Kurpiewski, M.R.³ Koziolkiewicz, M.⁴ Stec, W.J.⁵ Jen-Jacobson, L.⁶

29
- 0030035503
- (1996) Biochemistry , vol.35 , pp. 8846-8854
- Kurpiewski, M.R.¹ Koziolkiewicz, M.² Wilk, A.³ Stec, W.J.⁴ Jen-Jacobson, L.⁵

30
- 0019330787
- (1980) Biochemistry , vol.19 , pp. 3522-3530
- Lohmand, T.M.¹ DeHaseth, P.L.² Record Jr., M.T.³

31
- 0022474733
- (1986) Cell , vol.45 , pp. 619-629
- Jen-Jacobson, L.¹ Lesser, D.² Kurpiewski, M.³

32
- 0034624091
- (2000) J. Mol. Biol. , vol.304 , pp. 541-561
- Van Dam, L.¹ Levitt, M.H.²

33
- 0000826192
- (1994) Chem. Rev. , vol.94 , pp. 1315-1338
- Gorenstein, D.G.¹

34
- 0025816853
- (1991) J. Biol. Chem. , vol.266 , pp. 8861-8883
- Grzeskowiak, K.¹ Yanagi, K.² Privé, G.G.³ Dickerson, R.E.⁴

35
- 0032587032
- (1999) Biophys. J. , vol.77 , pp. 398-409
- Pichler, A.¹ Rüdisser, S.² Mitterböck, M.³ Huber, C.G.⁴ Winger, R.H.⁵ Liedl, K.R.⁶ Hallbrucker, A.⁷ Mayer, E.⁸

36
- 0001523608
- (1998) J. Phys. Chem. B , vol.102 , pp. 8934-8940
- Winger, R.H.¹ Liedl, K.R.² Rüdisser, S.³ Pichler, A.⁴ Hallbrucker, A.⁵ Mayer, E.⁶

37
- 0034716712
- (2000) J. Am. Chem. Soc. , vol.122 , pp. 3927-3931
- Wellenzohn, B.¹ Winger, R.H.² Hallbrucker, A.³ Mayer, E.⁴ Liedl, K.R.⁵

38
- 0032922174
- (1999) J. Biomol. Struct. Dyn. , vol.16 , pp. 845-862
- Cheatham III, T.E.¹ Cieplak, P.² Kollman, P.A.³

39
- 0031195002
- (1997) Biopolymers , vol.42 , pp. 113-124
- Schneider, B.¹ Neidle, S.² Berman, H.M.³

40
- 0031423949
- (1997) Biopolymers , vol.44 , pp. 23-44
- Berman, H.M.¹

41
- 0030426643
- (1996) Quart. Rev. Biophys. , vol.29 , pp. 309-368
- Hartmann, B.¹ Lavery, R.²

42
- 0020359857
- (1982) J. Biol. Chem. , vol.257 , pp. 14686-14707
- Fratini, A.V.¹ Kopka, M.L.² Drew, H.R.³ Dickerson, R.E.⁴

43
- 0034807859
- (2001) J. Am. Chem. Soc. , vol.123 , pp. 5044-5049
- Wellenzohn, B.¹ Flader, W.² Winger, R.H.³ Hallbrucker, A.⁴ Mayer, E.⁵ Liedl, K.R.⁶

44
- 0026713204
- (1992) Methods Enzymol. , vol.211 , pp. 449-467
- Von Kitzing, E.¹

45
- 0028222740
- (1994) Curr. Opin. Struct. Biol. , vol.4 , pp. 246-255
- Beveridge, D.L.¹ Ravishanker, G.²

46
- 0028047910
- (1994) J. Biomol. Struct. Dyn. , vol.11 , pp. 1203-1224
- Perree-Fauvet, M.¹ Gresh, N.²

47
- 0030759587
- (1997) J. Am. Chem. Soc. , vol.119 , pp. 6722-6730
- Cieplak, P.¹ Cheatham III, T.E.² Kollman, P.A.³

48
- 0029941154
- (1996) J. Mol. Biol. , vol.259 , pp. 434-444
- Cheatham III, T.E.¹ Kollman, P.A.²

49
- 0030862276
- (1997) Biophys. J. , vol.73 , pp. 2313-2336
- Young, M.A.¹ Ravishanker, G.² Beveridge, D.L.³

50
- 0000952715
- (1997) Biophys. J. , vol.72 , pp. 2395-2397
- De Souza, O.N.¹ Ornstein, R.L.²

51
- 0003982649
- University of California, San Francisco
- (1997) AMBER 5
- Case, D.A.¹ Peadman, D.A.² Caldwell, J.W.³ Cheatham III, T.⁴ Ross, W.S.⁵ Simmerling, C.L.⁶ Darden, T.A.⁷ Merz, K.M.⁸ Stanton, R.V.⁹ Cheng, A.L.¹⁰ Vincent, J.J.¹¹ Crowley, M.¹² Ferguson, D.M.¹³ Radmer, R.J.¹⁴ Seibel, G.L.¹⁵ Singh, U.C.¹⁶ Weiner, P.K.¹⁷ Kollman, P.A.¹⁸

52
- 0004268506
- University of California, San Francisco
- (1999) AMBER 6
- Case, D.A.¹ Pearlman, D.A.² Caldwell, J.W.³ Cheatham III, T.⁴ Ross, W.S.⁵ Simmerling, C.L.⁶ Darden, T.A.⁷ Merz, K.M.⁸ Stanton, R.V.⁹ Cheng, A.L.¹⁰ Vincent, J.J.¹¹ Crowley, M.¹² Tsui, V.¹³ Radmer, R.J.¹⁴ Duan, Y.¹⁵ Pitera, J.¹⁶ Massova, I.¹⁷ Seibel, G.L.¹⁸ Singh, U.C.¹⁹ Weiner, P.K.²⁰ Kollman, P.A.²¹ more..

53
- 0029011701
- (1995) J. Am. Chem. Soc. , vol.117 , pp. 5179-5197
- Cornell, W.D.¹ Cieplak, P.² Bayly, C.I.³ Gould, I.R.⁴ Merz Jr., K.M.⁵ Ferguson, D.M.⁶ Spellmeyer, D.C.⁷ Fox, T.⁸ Caldwell, J.W.⁹ Kollman, P.A.¹⁰

54
- 0001398008
- (2000) J. Comput. Chem. , vol.21 , pp. 1049-1074
- Wang, J.¹ Cieplak, P.² Kollman, P.A.³

55
- 33750587438
- (1984) J. Chem. Phys. , vol.81 , pp. 3684-3690
- Berendsen, H.J.C.¹ Postma, J.P.M.² Van Gunsteren, W.F.³ DiNola, A.⁴ Haak, J.R.⁵

56
- 0026742978
- (1992) Biophys. J. , vol.63 , pp. 751-759
- Berman, H.M.¹ Olson, W.K.² Beveridge, D.L.³ Westbrook, J.⁴ Gelbin, A.⁵ Demeny, T.⁶ Hsieh, S.-H.⁷ Srinivasan, A.R.⁸ Schneider, B.⁹

57
- 0031933884
- (1998) Nat. Struct. Biol. , vol.5 , pp. 104-108
- Kielkopf, C.L.¹ Baird, E.E.² Dervan, P.B.³ Rees, D.C.⁴

58
- 0028283502
- (1994) J. Mol. Biol. , vol.238 , pp. 669-681
- Ladbury, J.E.¹ Wright, J.W.² Sturtevant, J.M.³ Sigler, P.B.⁴

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