-
1
-
-
0022799080
-
Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements
-
Almer, A., Rudolph, H., Hinnen, A., and Hörz, W. 1986. Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements. EMBO J. 5: 2689-2696.
-
(1986)
EMBO J.
, vol.5
, pp. 2689-2696
-
-
Almer, A.1
Rudolph, H.2
Hinnen, A.3
Hörz, W.4
-
2
-
-
0032808218
-
Heteroduplex formation by human Rad51 protein: Effects of DNA end-structure, hRP-A and hRad52
-
Baumann, P. and West, S.C. 1999. Heteroduplex formation by human Rad51 protein: Effects of DNA end-structure, hRP-A and hRad52. J. Mol. Biol. 291: 363-374.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 363-374
-
-
Baumann, P.1
West, S.C.2
-
3
-
-
0035997356
-
ATP-dependent nucleosome remodeling
-
Becker, P.B. and Hörz, W. 2002. ATP-dependent nucleosome remodeling. Annu. Rev. Biochem. 71: 247-273.
-
(2002)
Annu. Rev. Biochem.
, vol.71
, pp. 247-273
-
-
Becker, P.B.1
Hörz, W.2
-
4
-
-
0032556865
-
Synergistic actions of Rad51 and Rad52 in recombination and DNA repair
-
Benson, F.E., Baumann, P., and West, S.C. 1998. Synergistic actions of Rad51 and Rad52 in recombination and DNA repair. Nature 391: 401-404.
-
(1998)
Nature
, vol.391
, pp. 401-404
-
-
Benson, F.E.1
Baumann, P.2
West, S.C.3
-
5
-
-
0034705604
-
Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes
-
Boyer, L.A., Logie, C., Bonte, E., Becker, P.B., Wade, P.A., Wolffe, A.P., Wu, C., Imbalzano, A.N., and Peterson, C.L. 2000. Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes. J. Biol. Chem. 275: 18864-18870.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 18864-18870
-
-
Boyer, L.A.1
Logie, C.2
Bonte, E.3
Becker, P.B.4
Wade, P.A.5
Wolffe, A.P.6
Wu, C.7
Imbalzano, A.N.8
Peterson, C.L.9
-
6
-
-
0001732595
-
Biochemical reconstitution of chromatin with physiological nucleosome spacing
-
Bulger, M. and Kadonaga, J.T. 1994. Biochemical reconstitution of chromatin with physiological nucleosome spacing. Methods. Mol. Genet. 5: 241-262.
-
(1994)
Methods. Mol. Genet.
, vol.5
, pp. 241-262
-
-
Bulger, M.1
Kadonaga, J.T.2
-
7
-
-
0035695023
-
Recombination at double-strand breaks and DNA ends: Conserved mechanisms from phage to humans
-
Cromie, G.A., Connelly, J.C., and Leach, D.R.F. 2001. Recombination at double-strand breaks and DNA ends: Conserved mechanisms from phage to humans. Mol. Cell 8: 1163-1174.
-
(2001)
Mol. Cell
, vol.8
, pp. 1163-1174
-
-
Cromie, G.A.1
Connelly, J.C.2
Leach, D.R.F.3
-
8
-
-
0029157378
-
Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions
-
Eisen, J.A., Sweder, K.S., and Hanawalt, P.C. 1995. Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions. Nucleic Acids Res. 23: 2715-2723.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2715-2723
-
-
Eisen, J.A.1
Sweder, K.S.2
Hanawalt, P.C.3
-
9
-
-
0035313855
-
Mechanisms for ATP-dependent chromatin remodeling
-
Flaus, A. and Owen-Hughes, T. 2001. Mechanisms for ATP-dependent chromatin remodeling. Curr. Opin. Genet. Dev. 11: 148-154.
-
(2001)
Curr. Opin. Genet. Dev.
, vol.11
, pp. 148-154
-
-
Flaus, A.1
Owen-Hughes, T.2
-
10
-
-
0035822999
-
The many faces of chromatin remodeling: Switching beyond transcription
-
Fyodorov, D.V. and Kadonaga, J.T. 2001. The many faces of chromatin remodeling: Switching beyond transcription. Cell 106: 523-525.
-
(2001)
Cell
, vol.106
, pp. 523-525
-
-
Fyodorov, D.V.1
Kadonaga, J.T.2
-
11
-
-
0002579139
-
Radiation-sensitive mutants and repair in yeast
-
(eds. J.F.T. Spencer et al.). Springer-Verlag, New York
-
Game, J.C. 1983. Radiation-sensitive mutants and repair in yeast. In Yeast genetics: Fundamental and Applied Aspects (eds. J.F.T. Spencer et al.), pp. 105-137. Springer-Verlag, New York.
-
(1983)
Yeast Genetics: Fundamental and Applied Aspects
, pp. 105-137
-
-
Game, J.C.1
-
12
-
-
0842302172
-
Folding of the DNA double helix in chromatin-like structures from simian virus 40
-
Germond, J.E., Hirt, B., Oudet, P., Gross-Bellard, M., and Chambon, P. 1975. Folding of the DNA double helix in chromatin-like structures from simian virus 40. Proc. Natl. Acad. Sci. 72: 1843-1847.
-
(1975)
Proc. Natl. Acad. Sci.
, vol.72
, pp. 1843-1847
-
-
Germond, J.E.1
Hirt, B.2
Oudet, P.3
Gross-Bellard, M.4
Chambon, P.5
-
13
-
-
0032168889
-
okra and spindle-B encode components of the RAD52 DNA repair pathway and affect meiosis and patterning in Drosophila oogenesis
-
Ghabrial, A., Ray, R.P., and Schüpbach, T. 1998. okra and spindle-B encode components of the RAD52 DNA repair pathway and affect meiosis and patterning in Drosophila oogenesis. Genes & Dev. 12: 2711-2723.
-
(1998)
Genes & Dev.
, vol.12
, pp. 2711-2723
-
-
Ghabrial, A.1
Ray, R.P.2
Schüpbach, T.3
-
14
-
-
0023790970
-
Supercoiling of intracellular DNA can occur in eukaryotic cells
-
Giaever, G.N. and Wang, J.C. 1988. Supercoiling of intracellular DNA can occur in eukaryotic cells. Cell 55: 849-856.
-
(1988)
Cell
, vol.55
, pp. 849-856
-
-
Giaever, G.N.1
Wang, J.C.2
-
15
-
-
0027182114
-
Helicases: Amino acid sequence comparisons and structure-function relationships
-
Gorbalenya, A.W. and Koonin, E.V. 1993. Helicases: Amino acid sequence comparisons and structure-function relationships. Curr. Opin. Struct. Biol. 3: 419-429.
-
(1993)
Curr. Opin. Struct. Biol.
, vol.3
, pp. 419-429
-
-
Gorbalenya, A.W.1
Koonin, E.V.2
-
16
-
-
0033564199
-
ACF consists of two subunits, Acf1 and ISWI, that function co-operatively in the ATP-dependent catalysis of chromatin assembly
-
Ito, T., Levenstein, M.E., Fyodorov, D.V., Kutach, A.K., Kobayashi, R., and Kadonaga, J.T. 1999. ACF consists of two subunits, Acf1 and ISWI, that function co-operatively in the ATP-dependent catalysis of chromatin assembly. Genes & Dev. 13: 1529-1539.
-
(1999)
Genes & Dev.
, vol.13
, pp. 1529-1539
-
-
Ito, T.1
Levenstein, M.E.2
Fyodorov, D.V.3
Kutach, A.K.4
Kobayashi, R.5
Kadonaga, J.T.6
-
17
-
-
0026355279
-
Chromatin assembly on plasmid DNA in vitro. Apparent spreading of nucleosome alignment from one region of pBR327 by histone H5
-
Jeong, S.W., Lauderdale, J.D., and Stein, A. 1991. Chromatin assembly on plasmid DNA in vitro. Apparent spreading of nucleosome alignment from one region of pBR327 by histone H5. J. Mol. Biol. 222: 1131-1147.
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 1131-1147
-
-
Jeong, S.W.1
Lauderdale, J.D.2
Stein, A.3
-
18
-
-
0031794286
-
Molecular mechanisms of DNA double-strand break repair
-
Kanaar, R., Hoeijmakers, J.H.J., and van Gent, D.C. 1998. Molecular mechanisms of DNA double-strand break repair. Trends Cell Biol. 8: 483-489.
-
(1998)
Trends Cell Biol.
, vol.8
, pp. 483-489
-
-
Kanaar, R.1
Hoeijmakers, J.H.J.2
Van Gent, D.C.3
-
19
-
-
0030864010
-
The Drosophila melanogaster RAD54 homolog, DmRAD54, is involved in the repair of radiation damage and recombination
-
Kooistra, R., Vreeken, K., Zonneveld, J.B.M., de Jong, A., Eeken, J.C.J., Osgood, C.J., Buerstedde, J.-M., Lohman, P.H.M., and Pastink, A. 1997. The Drosophila melanogaster RAD54 homolog, DmRAD54, is involved in the repair of radiation damage and recombination. Mol. Cell. Biol. 17: 6097-6104.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 6097-6104
-
-
Kooistra, R.1
Vreeken, K.2
Zonneveld, J.B.M.3
De Jong, A.4
Eeken, J.C.J.5
Osgood, C.J.6
Buerstedde, J.-M.7
Lohman, P.H.M.8
Pastink, A.9
-
20
-
-
0032803238
-
The Drosophila melanogaster DmRAD54 gene plays a crucial role in double-strand break repair after P-element excision and acts synergistically with Ku70 in the repair of X-ray damage
-
Kooistra, R., Pastink, A., Zonneveld, J.B.M., Lohman, P.H.M., and Eeken, J.C.J. 1999. The Drosophila melanogaster DmRAD54 gene plays a crucial role in double-strand break repair after P-element excision and acts synergistically with Ku70 in the repair of X-ray damage. Mol. Cell. Biol. 19: 6269-6275.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6269-6275
-
-
Kooistra, R.1
Pastink, A.2
Zonneveld, J.B.M.3
Lohman, P.H.M.4
Eeken, J.C.J.5
-
21
-
-
0028242846
-
DNA cruciforms facilitate in vitro strand transfer on nucleosomal templates
-
Kotani, H. and Kmiec, E.B. 1994. DNA cruciforms facilitate in vitro strand transfer on nucleosomal templates. Mol. Gen. Genet. 243: 681-690.
-
(1994)
Mol. Gen. Genet.
, vol.243
, pp. 681-690
-
-
Kotani, H.1
Kmiec, E.B.2
-
22
-
-
0035252918
-
The Rad51 and Dmc1 recombinases: A non-identical twin relationship
-
Masson, J.-Y. and West, S.C. 2001. The Rad51 and Dmc1 recombinases: A non-identical twin relationship. Trends Biochem. Sci. 26: 131-136.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 131-136
-
-
Masson, J.-Y.1
West, S.C.2
-
23
-
-
0034161571
-
Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing
-
Mazin, A.V., Zaitseva, E., Sung, P., and Kowalczykowski, S.C. 2000a. Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing. EMBO J. 19: 1148-1156.
-
(2000)
EMBO J.
, vol.19
, pp. 1148-1156
-
-
Mazin, A.V.1
Zaitseva, E.2
Sung, P.3
Kowalczykowski, S.C.4
-
24
-
-
0033634677
-
Rad54 protein is targeted to pairing loci by the Rad51 nucleoprotein filament
-
Mazin, A.V., Bornarth, C.J., Solinger, J.A., Heyer, W., and Kowalczykowski, S.C. 2000b. Rad54 protein is targeted to pairing loci by the Rad51 nucleoprotein filament. Mol. Cell 6: 583-592.
-
(2000)
Mol. Cell
, vol.6
, pp. 583-592
-
-
Mazin, A.V.1
Bornarth, C.J.2
Solinger, J.A.3
Heyer, W.4
Kowalczykowski, S.C.5
-
25
-
-
0032556870
-
Rad52 protein stimulates DNA strand exchange by Rad51 and replication protein A
-
New, J.H., Sugiyama, T., Zaitseva, E., and Kowalczykowski, S.C. 1998. Rad52 protein stimulates DNA strand exchange by Rad51 and replication protein A. Nature 391: 407-410.
-
(1998)
Nature
, vol.391
, pp. 407-410
-
-
New, J.H.1
Sugiyama, T.2
Zaitseva, E.3
Kowalczykowski, S.C.4
-
26
-
-
0038799991
-
Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
-
Paques, F. and Haber, J.E. 1999. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 63: 349-404.
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 349-404
-
-
Paques, F.1
Haber, J.E.2
-
27
-
-
0030964249
-
Nucleosome mobility and the maintenance of nucleosome positioning
-
Pazin, M.J., Bhargava, P., Geiduschek, E.P., and Kadonaga, J.T. 1997. Nucleosome mobility and the maintenance of nucleosome positioning. Science 276: 809-812.
-
(1997)
Science
, vol.276
, pp. 809-812
-
-
Pazin, M.J.1
Bhargava, P.2
Geiduschek, E.P.3
Kadonaga, J.T.4
-
28
-
-
0031171269
-
The RAD52 epistasis group in mammalian double strand break repair
-
Petrini, J.H.J., Bressan, D.A., and Yao, M.S. 1997. The RAD52 epistasis group in mammalian double strand break repair. Semin. Immunol. 9: 181-188.
-
(1997)
Semin. Immunol.
, vol.9
, pp. 181-188
-
-
Petrini, J.H.J.1
Bressan, D.A.2
Yao, M.S.3
-
29
-
-
0032492853
-
Catalysis of homologous DNA pairing by yeast Rad51 and Rad54 proteins
-
Petukhova, G., Stratton, S., and Sung, P. 1998. Catalysis of homologous DNA pairing by yeast Rad51 and Rad54 proteins. Nature 393: 91-94.
-
(1998)
Nature
, vol.393
, pp. 91-94
-
-
Petukhova, G.1
Stratton, S.2
Sung, P.3
-
30
-
-
0032832810
-
Yeast Rad54 promotes Rad51-dependent homologous DNA pairing via ATP hydrolysis-driven change in DNA double helix conformation
-
Petukhova, G., Van Komen, S., Vergano, S., Klein, H., and Sung, P. 1999. Yeast Rad54 promotes Rad51-dependent homologous DNA pairing via ATP hydrolysis-driven change in DNA double helix conformation. J. Biol. Chem. 274: 29453-29462.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 29453-29462
-
-
Petukhova, G.1
Van Komen, S.2
Vergano, S.3
Klein, H.4
Sung, P.5
-
31
-
-
0034601464
-
A chromatin remodelling complex involved in transcription and DNA processing
-
Shen, X., Mizuguchi, G., Hamiche, A., and Wu, C. 2000. A chromatin remodelling complex involved in transcription and DNA processing. Nature 406: 541-544.
-
(2000)
Nature
, vol.406
, pp. 541-544
-
-
Shen, X.1
Mizuguchi, G.2
Hamiche, A.3
Wu, C.4
-
32
-
-
0032556898
-
Stimulation by Rad52 of yeast Rad51-mediated recombination
-
Shinohara, A. and Ogawa, T. 1998. Stimulation by Rad52 of yeast Rad51-mediated recombination. Nature 391: 404-407.
-
(1998)
Nature
, vol.391
, pp. 404-407
-
-
Shinohara, A.1
Ogawa, T.2
-
33
-
-
0022234831
-
Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: A model system for study of higher order structure
-
Simpson, R.T., Thoma, F., and Brubaker, J.M. 1985. Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: A model system for study of higher order structure. Cell 42: 799-808.
-
(1985)
Cell
, vol.42
, pp. 799-808
-
-
Simpson, R.T.1
Thoma, F.2
Brubaker, J.M.3
-
34
-
-
0018962604
-
Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: Analogous measurements in insects and human cells
-
Sinden, R.R., Carlson, J.O., and Pettijohn, D.E. 1980. Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: Analogous measurements in insects and human cells. Cell 21: 773-783.
-
(1980)
Cell
, vol.21
, pp. 773-783
-
-
Sinden, R.R.1
Carlson, J.O.2
Pettijohn, D.E.3
-
35
-
-
0031004885
-
A single-stranded DNA-binding protein is needed for efficient presynaptic complex formation by the Saccharomyces cerevisiae Rad51 protein
-
Sugiyama, T., Zaitseva, E.M., and Kowalczykowski, S.C. 1997. A single-stranded DNA-binding protein is needed for efficient presynaptic complex formation by the Saccharomyces cerevisiae Rad51 protein. J. Biol. Chem. 272: 7940-7945.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 7940-7945
-
-
Sugiyama, T.1
Zaitseva, E.M.2
Kowalczykowski, S.C.3
-
36
-
-
0030995362
-
Yeast Rad55 and Rad57 proteins form a heterodimer that functions with replication protein A to promote DNA strand exchange by Rad51 recombinase
-
Sung, P. 1997a. Yeast Rad55 and Rad57 proteins form a heterodimer that functions with replication protein A to promote DNA strand exchange by Rad51 recombinase. Genes & Dev. 11: 1111-1121.
-
(1997)
Genes & Dev.
, vol.11
, pp. 1111-1121
-
-
Sung, P.1
-
37
-
-
0030666945
-
Function of yeast Rad52 protein as a mediator between replication protein A and the Rad51 recombinase
-
1997b. Function of yeast Rad52 protein as a mediator between replication protein A and the Rad51 recombinase. J. Biol. Chem. 272: 28194-28197.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 28194-28197
-
-
-
38
-
-
0033602450
-
Mouse Rad54 affects DNA conformation and DNA-damage-induced Rad51 foci formation
-
Tan, T.L., Essers, J., Citterio, E., Swagemakers, S.M., de Wit, J., Benson, F.E., Hoeijmakers, J.H., and Kanaar, R. 1999. Mouse Rad54 affects DNA conformation and DNA-damage-induced Rad51 foci formation. Curr. Biol. 9: 325-328.
-
(1999)
Curr. Biol.
, vol.9
, pp. 325-328
-
-
Tan, T.L.1
Essers, J.2
Citterio, E.3
Swagemakers, S.M.4
De Wit, J.5
Benson, F.E.6
Hoeijmakers, J.H.7
Kanaar, R.8
-
39
-
-
0033635247
-
Superhelicity-driven homologous DNA pairing by yeast recombination factors Rad51 and Rad54
-
Van Komen, S., Petukhova, G., Sigurdsson, S., Stratton, S., and Sung, P. 2000. Superhelicity-driven homologous DNA pairing by yeast recombination factors Rad51 and Rad54. Mol. Cell 6: 563-572.
-
(2000)
Mol. Cell
, vol.6
, pp. 563-572
-
-
Van Komen, S.1
Petukhova, G.2
Sigurdsson, S.3
Stratton, S.4
Sung, P.5
-
40
-
-
0030839857
-
Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II
-
Varga-Weisz, P.D., Wilm, M., Bonte, E., Dumas, K., Mann, M., and Becker, P.B. 1997. Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II. Nature 388: 598-602.
-
(1997)
Nature
, vol.388
, pp. 598-602
-
-
Varga-Weisz, P.D.1
Wilm, M.2
Bonte, E.3
Dumas, K.4
Mann, M.5
Becker, P.B.6
|