Robustness of ancestral state estimates: Evolution of life history strategy in Ichneumonoid parasitoids

Systematic Biology

Volumn 51, Issue 3, 2002, Pages 450-477

  Belshaw, Robert ^a   Quicke, Donald ^a  

^a IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; CLASSIFICATION; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE HOMOLOGY; STATISTICAL MODEL; TIME; WASP;

ANIMALS; BASE SEQUENCE; LIKELIHOOD FUNCTIONS; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE HOMOLOGY, NUCLEIC ACID; TIME FACTORS; WASPS;

ANIMALIA; APHIDIINAE; BRACONIDAE; EUPHORINAE; HELCONINAE; HEXAPODA; HYMENOPTERA; ICHNEUMONOIDEA; MESOSTOINAE; VESPIDAE;

EID: 0036592401     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/10635150290069896     Document Type: Article

References (88)

1. Askew, R. R., and M. R. Shaw. 1986. Parasitoid communities: Their size, structure and development. Pages 225-264 in Insect parasitoids (J. Waage and D. Greathead, eds.). Royal Entomological Society of London, London.
2. Austin, A. D., R. A. Wharton, and P. C. Dangerfield. 1993. Revision of the endemic Australian subfamily Trachypetinae Schulz s.l. (including Cercobarconinae Tobias) (Hymenoptera: Braconidae). Syst. Entomol. 18:97-119.
3. Belshaw, R. 1994. Life history characteristics of Tachinidae (Diptera) and their effect on polyphagy. Pages 145-162 in Parasitoid community ecology (B. A. Hawkins and W. Sheehan, eds.). Oxford Univ. Press, Oxford.
4. Belshaw, R., M. Dowton, D. L. J. Quicke, and A. D. Austin. 2000. Estimating ancestral geographic distributions: A Gondwanan origin for aphid parasitoids? Proc. R. Soc. London B 267:491-496.
5. Belshaw, R., M. Fitton, E. Herniou, C. Gimeno, and D. L. J. Quicke. 1998. A phylogenetic reconstruction of the Ichneumonoidea (Hymenoptera) based on the D2 variable region of 28S ribosomal RNA. Syst. Entomol. 23:109-123.
6. Belshaw, R., and D. L. J. Quicke. 1997. A molecular phylogeny of the Aphidiinae (Hymenoptera: Braconidae). Mol. Phylogenet. Evol. 7:281-293.
7. Broad, G. R., and D. L. J. Quicke. 2000. The adaptive significance of host location by vibrational sounding in parasitoid wasps. Proc. R. Soc. London B 267:2403-2409.
8. Buckley, T. R., C. Simon, H. Shimodaira, and G. K. Chambers. 2001. Evaluating hypotheses on the origin and evolution of the New Zealand alpine cicadas (maoricicada) using multiple-comparison tests of tree topology. Mol. Biol. Evol. 18:223-234.
9. Chang, B. S. W., and D. L. Campbell. 2000. Bias in phylogenetic reconstruction of vertebrate rhodopsin sequences. Mol. Biol. Evol. 17:1220-1231.
10. Chen, X., J. He, and C. van Achterberg. 1993. A revision of the subtribe Brulleiina van Achterberg (Hymenoptera; Braconidae; Helconinae) from China. Zool. Meded. Leiden 67:375-395.
11. Cognato, A. I., and A. P. Vogler. 2001. Exploring data interaction and nucleotide alignment in a multiple gene analysis of Ips (Coleoptera: Scolytinae). Syst. Biol. 50:758-780.
12. Cunningham, C. W., K. E. Omland, and T. H. Oakley. 1998. Reconstructing ancestral character states: A critical reappraisal. Trends Ecol. Evol. 13:361-366.
13. Donoghue, M. J., and D. D. Ackerly. 1996. Phylogenetic uncertainties and sensitivity analyses in comparative biology. Philos. Trans. R. Soc. London B 351:1241-1249.
14. Dowton, M., and A. D. Austin. 2001. Simultaneous analysis of 16S, 28S, COI and morphology in the Hymenoptera: Apocrita-Evolutionary transitions among parasitic wasps. Biol. J. Linn. Soc. 74:87-111.
15. Dowton, M., R. Belshaw, A. D. Austin, and D. L. J. Quicke. 2002. Simultaneous molecular and morphological analysis of braconid relationships (Insecta: Hymenoptera: Braconidae) indicates independent mt-tRNA gene inversions within a single wasp family. J. Mol. Evol. 54:210-226.
16. Dumbacher, J. P., and R. C. Fleischer. 2001. Phylogenetic evidence for colour pattern convergence in toxic pitohuis: Müllerian mimicry in birds? Proc. R. Soc. London B 268:1971-1976.
17. Edwards, O. R., and K. R. Hopper. 1999. Using superparasitism by a stem borer parasitoid to infer host refuge. Ecol. Entomol. 24:7-12.
18. Eggleton, P., and R. Belshaw. 1992. Insect parasitoids: An evolutionary overview. Philos. Trans. R. Soc. London B 337:1-20.
19. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
20. Friedrich, M., and D. Tautz. 1997. An episodic change of rDNA nucleotide substitution rate has occurred during the emergence of the insect order Diptera. Mol. Biol. Evol. 14:644-653.
21. Gauld, I. D. 1988. Evolutionary patterns of host utilization by ichneumonoid parasitoids (Hymenoptera: Ichneumonidae and Braconidae). Biol. J. Linn. Soc. 35:351-377.
22. Gauld, I., and D. Wahl. 2000a. The Townesioninae: A distinct subfamily of Ichneumonidae (Hymenoptera) or a clade of the Banchinae? Trans. Am. Entomol. Soc. 126:279-292.
23. Gauld, I. D., and D. B. Wahl. 2000b. The Labeninae (Hymenoptera: Ichneumonidae): A study in phylogenetic reconstruction and evolutionary biology. Zool. J. Linn. Soc. 129:271-347.
24. Gibson, L. P. 1972. Revision of the genus Urosigalphus of the United States and Canada (Hymenoptera: Braconidae). Misc. Publ. Entomol. Soc. Am. 8:83-134.
25. Giribet, G. 2001. Exploring the behaviour of POY, a program for direct optimisation of molecular data. Cladistics 17:S60-S70.
26. Giribet, G., and W. C. Wheeler. 1999. On gaps. Mol. Phylogenet. Evol. 13:132-143.
27. Goldman, N., J. P. Anderson, and A. G. Rodrigo. 2000. Likelihood-based tests of topologies in phylogenetics. Syst. Biol. 49:652-670.
28. Goloboff, P. A. 1991. Homoplasy and the choice among cladograms. Cladistics 7:215-232.
29. Hancock, J. M., and G. A. Dover. 1988. Molecular coevolution among cryptically simple expansion segments of eukaryotic 26S/28S rRNAs. Mol. Biol. Evol. 5:377-391.
30. Hancock, J. M., D. Tautz, and G. A. Dover. 1988. Evolution of the secondary structure and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster. Mol. Biol. Evol. 5:393-414.
31. Hanson, P. E., And I. D. Gauld. 1995. The Hymenoptera of Costa Rica. The Natural History Museum, London, and Oxford Univ. Press, Oxford.
32. Harvey, P. H., and M. D. Pagel. 1991. The comparative method in evolutionary biology. Oxford Univ. Press, Oxford.
33. Hibbett, D. S., and M. J. Donoghue. 2001. Analysis of character correlations among wood decay mechanisms, mating systems, and substrate ranges in Homobasidiomycetes. Syst. Biol. 50:215-242.
34. Huddleston, T., and J. R. T. Short. 1978. A new genus of Euphorinae (Hymenoptera: Braconidae) from Australia, with a description of the final instar larva of one species. J. Aust. Entomol. Soc. 17:317-321.
35. Huelsenbeck, J. P., and B. Rannala. 1997. Phylogenetic methods come of age: Testing hypotheses in an evolutionary context. Science 276:227-232.
36. Huelsenbeck, J. P., B. Rannala, and J. P. Masly. 2000. Accommodating phylogenetic uncertainty in evolutionary studies. Science 288:2349-2350.
37. Kishino, H., and M. Hasegawa. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:170-179.
38. Lockhart, P. J., A. W. D. Larkum, M. A. Steel, P. J. Waddell, and D. Penny. 1996. Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis. Proc. Natl. Acad. Sci. USA. 93:1930-1934.
39. Kjer, K. M. 1995. Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: An example of alignment and data presentation from the frogs. Mol. Phylogenet. Evol. 4:314-330.
40. Maddison, W. P. 1995. Calculating the probability distributions of ancestral states reconstructed by parsimony on phylogenetic trees. Syst. Biol. 44:474-481.
41. Maddison, W. P., and D. R. Maddison. 1992. MacClade: Analysis of phylogeny and character evolution, version 3.0. Sinauer Associates, Sunderland, Massachusetts.
42. Mathews, D. H., J. Sabina, M. Zuker, and D. H. Turner. 1999. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288:911-940.
43. Mayhew, P. J., and T. M. Blackburn. 1999. Does development mode organise life-history traits in the parasitoid Hymenoptera? J. Anim. Ecol. 68:906-916.
44. Morrison, D. A., and J. T. Ellis. 1997. Effects of nucleotide sequence alignment on phylogeny estimation: A case study of 18S rDNAs of Apicomplexa. Mol. Biol. Evol. 14:428-441.
45. Mueller, U. G., S. A. Rehner, and T. R. Shultz. 1998. The evolution of agriculture in ants. Science 281:2034-2038.
46. Oda, R. A. M., M. V. de Macedo, and D. L. J. Quicke. 2001. First biological data for Aspilodemon Fischer (Hymenoptera: Braconidae: Hydrangeocolinae): Parasitoids of cecidomyiid fly galls on Asteraceae in Brazil. J. Hymenopt. Res. 10:126-130.
47. Omland, K. E. 1997. Examining two standard assumptions of ancestral reconstructions: Repeated loss of dichromatism in dabbling ducks (Anatini). Evolution 51:1636-1646.
48. Omland, K. E. 1999. The assumptions and challenges of ancestral state reconstruction. Syst. Biol. 48:604-611.
49. Page, R. D. M. 2000. Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching. Nucleic Acids Res. 28:3839-3845.
50. Page, R. D. M., and E. C. Holmes. 1998. Molecular evolution: A phylogenetic approach. Blackwell, Oxford, UK.
51. Pagel, M. 1994. Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters. Proc. R. Soc. London B 255:37-45.
52. Pagel, M. 1999a. The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies. Syst. Biol. 48:612-622.
53. Pagel, M. 1999b. Inferring the historical patterns of biological evolution. Nature 401:877-884.
54. Park, J.-S., and C. van Achterberg. 1994. A new genus of the subfamily Ecnomiinae van Achterberg (Hymenoptera: Braconidae) from Korea. Zool. Meded. Leiden 68:49-54.
55. Posada, D., and K.A. Crandall. 1998. Modeltest: Testing the model of DNA substitution. Bioinformatics 14:817-818.
56. Quicke, D. L. J. 1997. Parasitic wasps. Chapman and Hall, London.
57. Quicke, D. L. J., and R. Belshaw. 1999. Incongruence between morphological data sets: An example from the evolution of endoparasitism among parasitic wasps (Hymenoptera: Braconidae). Syst. Biol. 48:436-454.
58. Quicke, D. L. J., M. G. Fitton, and J. Harris. 1995. Ovipositor steering mechanisms in braconid wasps. J. Hymenopt. Res. 4:110-120.
59. Quicke, D. L. J., M. G. Fitton, D. G. Notton, G. R. Broad, and K. Dolphin. 2000. Phylogeny of the Ichneumonidae (Hymenoptera): A simultaneous molecular and morphological analysis. Pages 74-83 in Hymenoptera: Evolution, biodiversity and biological control (A. D. Austin and M. Dowton, eds.). CSIRO Publishing, Canberra, Australia.
60. Quicke, D. L. J., A. Leralec, and L. Vilhelmsen. 1999. Ovipositor structure and function in the parasitic Hymemoptera with an exploration of new hypotheses. Atti Accad. Naz. Ital. Entomol. Rc. 47:197-239.
61. Quicke, D. L. J., and C. van Achterberg. 1990. Phylogeny of the subfamilies of the family Braconidae (Hymenoptera: Ichneumonoidea). Zool. Verh. 258:1-95.
62. Ree, R. H., and M. J. Donoghue. 1998. Step matrices and the interpretation of homoplasy. Syst. Biol. 47:582-588.
63. Ronquist, F. 1999. Phylogeny of the Hymenoptera (Insecta): The state of the art. Zool. Scr. 28:3-11.
64. Ruberson, J. R., and J. B. Whitfield. 1996. Facultative egg-larval parasitism of the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae) by Cotesia marginiventris (Hymenoptera: Braconidae). Fla. Entomol. 79:296-301.
65. Salisbury, B. A., and J. Kim. 2001. Ancestral state estimation and taxon sampling density. Syst. Biol. 50:557-564.
66. Sanchis, A., A. Latorre, E. Gonález-Candelas, and J. M. Michelena. 2000. An 185 rDNA based molecular phylogeny of Aphidiinae (Hymenoptera: Braconidae). Mol. Phylogenet. Evol. 14:180-194.
67. Sanchis, A., J. M. Michelena, A. Latorre, D. L. J. Quicke, U. Gärdenfors, and R. Belshaw. 2001. The phylogenetic analysis of variable length sequence data: Elongation factor-1α introns in European populations of the parasitoid wasp Pauesia (Hymenoptera: Braconidae: Aphidiinae). Mol. Biol. Evol. 18:1117-1131.
68. Schluter, D., T. Price, A. Ø. Mooers, and D. Ludwig. 1997. Likelihood of ancestor states in adaptive radiation. Evolution 51:1699-1711.
69. Sharkey, M. J. 1992. Cladistics and tribal classification of the Agathidinae (Hymenoptera: Braconidae). J. Nat. Hist. 26:425-447.
70. Shaw, M. R. 1983. On evolution of endoparasitism: The biology of some genera of Rogadinae (Braconidae). Contrib. Am. Entomol. Inst. 20:307-328.
71. Shaw, M. R., and T. Huddleston. 1991. Classification and biology of braconid wasps (Hymenoptera: Braconidae). Handb. Ident. Br. Insects 7(11):1-126.
72. Sheehan, W., and B. A. Hawkins. 1991. Attack strategy as an indicator of host range in metopiine and pimpline Ichneumonidae (Hymenoptera). Ecol. Entomol. 16:129-131.
73. Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
74. Smith, P. T., S. Kambhampati, W. Völkl, and M. Mackauer. 1999. A phylogeny of aphid parasitoids (Hymenoptera: Braconidae: Aphidiinae) inferred from mitochondrial NADH 1 dehydrogenase gene sequence. Mol. Phylogenet. Evol. 11:236-245.
75. Sperling, F. A. H., and P. Feeny. 1996. Umbellifer and composite feeding in Papilio: Phylogenetic frameworks and constraints on caterpillars. Pages 299-306 in Swallowtail butterflies: Their ecology and evolutionary biology (J. M. Scriber, Y. Tsubaki, and R. C. Lederhouse, eds.). Scientific Publishers, Gainesville, Florida.
76. Swofford, D. L. 1998. PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
77. Swofford, D. L., G. J. Olsen, P. J. Waddell, and D. M. Hillis. 1996. Phylogenetic inference. Pages 407-514 in Molecular systematics (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer Associates, Sunderland, Massachusetts.
78. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The ClustalX Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
79. van Achterberg, C. 1979a. A revision of the species of Amicrocentrinae, a new subfamily (Hymenoptera, Braconidae), with a description of the final larval instar of Amicrocentrum curvinervis by J. R. T. Short. Tijdschr. Entomol. 122:1-28.
80. van Achterberg, C. 1979b. A revision of the new subfamily Xiphozelinae (Hymenoptera, Braconidae). Tijdschr. Entomol. 122:29-46.
81. Wharton, R. A. 1993. Bionomics of the Braconidae. Annu. Rev. Entomol. 38:121-413.
82. Wharton, R. A., and C. van Achterberg. 2000. Family group names in Braconidae (Hymenoptera: Ichneumonoidea). J. Hymenopt. Res. 9:254-270.
83. Wharton, R. A., P. M. Marsh, and M. J. Sharkey. 1997. Manual of the New World genera of the family Braconidae (Hymenoptera). Special Publication of the International Society of Hymenopterists, Washington DC, U.S.A.
84. Wheeler, W. C. 1995. Sequence alignment, parameter sensitivity, and the phylogenetic analysis of molecular data. Syst. Biol. 44:321-331.
85. Wheeler, W. 1996. Optimization alignment: the end of multiple sequence alignment in phylogenetics? Cladistics 12:1-9.
86. Whitfield, J. B. 1998. Phylogeny and evolution of host-parasitoid interactions in Hymenoptera. Annu. Rev. Entomol. 43:129-151.
87. Yang, Z. 1996. Among-site rate variation and its impact on phylogenetic analyses. Trends Ecol. Evol. 11:367-372.
88. Zuker, M., D. H. Mathews, and D. H. Turner. 1999. Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide. Pages 11-43 in RNA biochemistry and biotechnology (J. Barciszewski and B. F. C. Clark, eds.). NATO ASI Series, Kluwer Academic Publishers, Dordrecht, The Netherlands.