Expression Studies on Clustered Trypanosomatid Box C/D Small Nucleolar RNAs

Journal of Biological Chemistry

Volumn 276, Issue 17, 2001, Pages 14289-14298

  Xu, Yu Xin ^a   Liu, Li ^b   Lopez Estraño, Carlos ^b   Michaeli, Shulamit ^b  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^b BAR ILAN UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; CHROMOSOMES; ENZYMES; GENES;

FLANKING SEQUENCES;

RNA;

MESSENGER RNA; RIBOSOME RNA; SMALL NUCLEOLAR RNA; AMANITIN; DNA DIRECTED RNA POLYMERASE; NUCLEIC ACID SYNTHESIS INHIBITOR; OLIGONUCLEOTIDE; RIBOSE; RNA POLYMERASE II;

ARTICLE; CHROMOSOMAL LOCALIZATION; DNA FLANKING REGION; GENE EXPRESSION; GENETIC TRANSCRIPTION; LEPTOMONAS COLLOSOMA; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TRYPANOSOMA; AMINO ACID SEQUENCE; ANIMAL; BIOLOGICAL MODEL; CONFORMATION; DNA METHYLATION; DNA SEQUENCE; DOSE RESPONSE; GENE DELETION; GENE VECTOR; GENETICS; METABOLISM; MOLECULAR GENETICS; MULTIGENE FAMILY; NORTHERN BLOTTING; PLASMID; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROMOTER REGION; SEQUENCE HOMOLOGY; TRANSGENIC ANIMAL; ULTRASTRUCTURE;

LEPTOMONAS COLLOSOMA; PROTOZOA; TRYPANOSOMA; VECTORS;

AMANITINS; AMINO ACID SEQUENCE; ANIMALS; ANIMALS, GENETICALLY MODIFIED; BASE SEQUENCE; BLOTTING, NORTHERN; CLONING, MOLECULAR; DNA METHYLATION; DNA-DIRECTED RNA POLYMERASES; DOSE-RESPONSE RELATIONSHIP, DRUG; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GENE DELETION; GENETIC VECTORS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; NUCLEIC ACID CONFORMATION; NUCLEIC ACID SYNTHESIS INHIBITORS; OLIGONUCLEOTIDES; PLASMIDS; PROMOTER REGIONS (GENETICS); REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RIBOSE; RNA POLYMERASE II; RNA, MESSENGER; RNA, SMALL NUCLEOLAR; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRANSCRIPTION, GENETIC; TRYPANOSOMA;

EID: 0035957919     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M007007200     Document Type: Article

References (55)

1. Maxwell, E. S., and Fournier, M. J. (1995) Annu. Rev. Biochem. 35, 897-934
2. Bachellerie, J.-P., and Cavaille, J. (1997) Trends Biochem. Sci. 22, 257-261
3. Smith, C. M., and Steitz, J. A. (1997) Cell 89, 669-672
4. Tollervey, D., and Kiss, T. (1997) Curr. Opin. Cell Biol. 9, 337-342
5. Weinstein, L. B., and Steitz, J. A. (1999) Curr. Opin. Cell Biol. 11, 378-384
6. Balakin, A. G., Smith, L., and Fournier, M. (1996) Cell 86, 823-834
7. Kiss-László, S., Henry, Y., Bachellerie, J.-P., Caizergues-Ferrer, M., and Kiss, T. (1996) Cell 85, 1077-1088
8. Ganot, P., Bortolin, M., and Kiss, T. (1997) Cell 89, 799-809
9. Cavaille, J., Nicoloso, M., and Bachellerie, J.-P. (1996) Nature 383, 732-735
10. Kiss-László, Z., Henry, Y., and Kiss, T. (1998) EMBO J. 17, 797-807
11. Baserga, S. J., Yang, X. W., and Steitz, J. A. (1991) EMBO J. 10, 2645-2651
12. Peculis, B. A., and Steitz, J. A. (1994) Genes Dev. 8, 2241-2255
13. Tycowski, K. T., Smith, C. M., Shu, M. D., and Steitz, J. A. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 14480-14485
14. Leverette, R. D., Andrews, M. T., and Maxwell, E. S. (1992) Cell 71, 1215-1221
15. Fragapane, P., Prislei, S., Michienzi, A., Caffarelli, E., and Bozzoni, I. (1993) EMBO J. 12, 2921-2928
16. Tycowski, K. T., Shu, M. D., and Steitz, J. A. (1993) Genes Dev. 7, 1176-1190
17. Ooi, S. L., Samarsky, D. A., Fournier, M. J., and Boeke, J. D. (1998) RNA 4, 1096-1110
18. Villa, T., Ceradini, F., Presutti, C., and Bozzoni, I. (1998) Mol. Cell. Biol. 18, 3376-3383
19. Petfalski, E., Dandekar, T., Henry, Y., and Tollervey, D. (1998) Mol. Cell. Biol. 18, 1181-1189
20. Qu, L. H., Henras, A., Lu, Y. J., Zhou, H., Zhou, W. X., Zhu, Y. Q., Zhao, J., Henry, Y., Caizergues-Ferrer, M., and Bachellerie, J.-P. (1999) Mol. Cell. Biol. 19, 1144-1158
21. Chanfreau, G., Legrain, P., and Jacquier, A. (1998) J. Mol. Biol. 284, 975-988
22. Chanfreau, G., Rotondo, G., Legrain, P., and Jacquier, A. (1998) EMBO J. 17, 3726-3737
23. Leader, D. J., Clark, G. P., Watters, J., Beven, A. F., Shaw, P. J., and Brown, J. W. (1999) Plant Mol. Biol. 39, 1091-1100
24. Watkins, N. J., Leverette, R. D., Xia, L., Andrews, M. T., and Maxwell, E. S. (1996) RNA 2, 118-133
25. Xia, L., Watkins, N. J., and Maxwell, E. S. (1997) RNA 3, 17-26
26. Sogin, M. L., Elwood, H. J., and Gunderson, J. H. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 1383-1387
27. Agabian, N. (1990) Cell 61, 1157-1160
28. Ullu, E., Tschudi, C., and Günzl, A. (1997) in Molecular Biology of Parasitic Protozoa (Smith, D. F., and Parsons, M., eds) pp. 115-129, Oxford University Press, Oxford
29. Stuart, K., Allen, T. E., Heidmann, S., and Seiwert, S. D. (1997) Microbiol. Mol. Biol. Rev. 61, 105-120
30. Pays, E., and Vanhamme, L. (1996) in Molecular Biology of Parasitic Protozoa (Smith, D. F., and Parsons, M., eds) pp. 88-114, Oxford University Press, Oxford
31. Myler, P. J., Audleman, L., deVos, T., Hixson, G., Kiser, P., Lemley, C., Magness, C., Rickel, E., Sisk, E., Sunkin, S., Swartzell, S., Westlake, T., Bastien, P., Fu, G., Ivens, A., and Stuart, K. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 2902-2906
32. Campbell, D. A., Kubo, K., Clark, C. G., and Boothroyd, J. C. (1987) J. Mol. Biol. 196, 113-124
33. Levitan, A., Xu, Y.-x., Ben-Dov, C., Ben-Shlomo, H., Zhang, Y., and Michaeli, S. (1998) Nucleic Acids Res. 26, 1775-1783
34. Roberts, T. G., Sturm, N. C., Yee, B. K., Yu, M. C., Hartshorne, T., Agabian, N., and Campbell, D. A. (1998) Mol. Cell. Biol. 18, 4409-4417
35. Dunbar, D. A., Wormsley, S., Lowe, T. M., and Baserga, S. J. (2000) J. Biol. Chem. 275, 14767-14776
36. Kapler, G. M., Coburn, C. M., and Beverley, S. M. (1990) Mol. Cell. Biol. 10, 1084-1094
37. Goldring, A., and Michaeli, S. (1995) Gene (Amst.) 156, 139-144
38. Goldring, A., Karchi, M., and Michaeli, S. (1994) Exp. Parasitol. 80, 333-338
39. Xu, Y.-x., Liu, L., and Michaeli, S. (2000) J. Biol. Chem. 275, 27883-27892
40. Goldring, A., Zimmer, Y., Ben-Yehuda, E., Goncharov, I., and Michaeli, S. (1996) Exp. Parasitol. 84, 28-41
41. Patzelt, E., Perry, K. L., and Agabian, N. (1989) Mol. Cell. Biol. 9, 4291-4297
42. Maden, B. E. H., Corbett, M. E., Heeney, P. A., Pugh, K., and Ajuh, P. M. (1995) Biochimie (Paris) 77, 22-29
43. Lowe, T. M., and Eddy, S. R. (1999) Science 283, 1168-1171
44. Ullu, E., and Tschudi, C. (1990) Nucleic Acids Res. 18, 3319-3326
45. Goncharov, I., Palfi, Z., Bindereif, A., and Michaeli, S. (1999) J. Biol. Chem. 274, 12217-12221
46. Saito, R. M., Elgort, M. G., and Campbell, D. A. (1994) EMBO J. 13, 5460-5469
47. Roberts, T. G., Dungan, J. M., Watkins, K. P., and Agabian, N. (1996) Mol. Biochem. Parasitol. 83, 163-174
48. Gray, M. W. (1979) Can. J. Biochem. 57, 914-926
49. Omer, A. D., Lowe, T. M., Russell, A. G., Ebhardt, H., Eddy, S. R., and Dennis, P. P. (2000) Science 288, 517-522
50. Caffarelli, E., Arese, M., Santoro, B., Fragapane, P., and Bozzoni, I. (1994) Mol. Cell. Biol. 14, 2966-2974
51. Leader, D. J., Clark, G. P., Watters, J., Beven, A. F., Shaw, P. J., and Brown, J. W. (1997) EMBO J. 16, 5742-5751
52. Ben-Shlomo, H., Levitan, A., Béjà, O., and Michaeli, S. (1997) Nucleic Acids Res. 25, 4977-4984
53. Li, L., Otake, L. R., Xu, Y.-x., and Michaeli, S. (2000) J. Biol. Chem. 275, 2259-2264
54. Chanfreau, G., Elela, S. A., Ares, M. J., and Guthrie, C. (1997) Genes Dev. 11, 2741-2751
55. Zuker, M. (1994) Methods Mol. Biol. 25, 267-294