Synchrotron protein footprinting: A technique to investigate protein-protein interactions

Journal of Biomolecular Structure and Dynamics

Volumn 19, Issue 3, 2001, Pages 405-418

  Goldsmith, Sharon C ^a   Guan, Jing Qu ^a   Almo, Steven C ^a   Chance, Mark R ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; GELSOLIN; PHENYLALANINE; PROTEIN; SOLVENT;

ARTICLE; CHEMICAL STRUCTURE; COMPLEX FORMATION; MASS SPECTROMETRY; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN FOOTPRINTING; PROTEIN PROTEIN INTERACTION; RNA ANALYSIS; STRUCTURE ANALYSIS; SYNCHROTRON; TECHNIQUE;

EID: 0035702274     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2001.10506750     Document Type: Article

References (44)

1. Lappalainen, P., Fedorov, E. V., Dedorov, A. A., Almo, S. C., and Drubin, D. G., 1997. EMBO J., 16:5520–5530.
2. Kiefhaber, T., and Baldwin, R. L., 1995. J. Mol. Biol., 252:122–131.
3. Wertman, K. F., Drubin, D. G., and Botstein, D., 1992. Genetics, 132:337–350.
4. Reijo, R. A., Cooper, E. M., Beagle, G. J., and Huffaker, T. C., 1994. Mol. Biol. Cell, 5:29–43.
5. Kay, M. S., Ramos, C. H.I., and Baldwin, R. L., 1999. Proc. Natl. Sci. USA., 96:2007–2012.
6. Bai, Y., and Englander, S. W., 1996. Proteins, 24:145–151.
7. Chamberlain, A. K., and Marqusee, S., 1997. Structure, 5:859–863.
8. Moffat, K., 1998. Acta Crystallorgr. Vol. 54, 833–41. A
9. McGough, A., Pope, B., Chiu, W., and Weeds, A., 1997. J. Cell. Biol., 138:771–781.
10. Agrawal, R. K., Heagle, A. B., Penczek, P., Grassucci, R. A., and Frank, J., 1999. Nature Struct. Biol., 6:643–647.
11. Gabashvili, I. S., Agrawal, R. K., Spahn, C. M.T., Grassucci, R. A., Svergun, D. I., Frank, J., and Penczek, P., 2000. Cell, 100:537–549.
12. Frank, J., and Agrawal, R. K., 2000. Nature, 406:318–322.
13. Sclavi, B., Chance, M. R., Brenowitz, M., and Woodson, S., 1998. Science, 279:1940–1943.
14. Ralston, C. Y., He, Q., Brenowitz, M., and Chance, M. R., 2000. Nat. Struct. Biol., 7:371–374.
15. Sclavi, B., Woodson, S., Sullivan, M., Chance, M. R., and Brenowitz, M., 1997. J. Mol. Biol., 266:144–159.
16. Ralston, C. Y., Sclavi, B., Sullivan, M., Deras, M. L., Woodson, S. A., Chance, M. R., and Brenowitz, M., 2000. Meth. Enzymol., 317:353–368.
17. Sclavi, B., Sullivan, M., Woodson, S., Chance, M. R., and Brenowitz, M., 1998. Meth. Enzymol., 295:379–402.
18. Petri, V., and Brenowitz, M., 1997. Curr. Opin. Biotech., 8 (1):36–44.
19. Dhavan, G. M., Crothers, D., Chance, M. R., and Brenowitz, M., 2001. Analysis of Macromolecules:A Practical Approach. Edited by:Johnson, K. A., Oxford:IRL press at Oxford University Press. in press
20. Maleknia, S. D., Brenowitz, M., and Chance, M. R., 1999. Anal. Chem., 71:3965–3973.
21. Maleknia, S. D., Ralston, C. Y., Brenowitz, M., Downard, K. M., and Chance, M. R., 2001. Anal. Biochem., 289:103–115.
22. Chance, M. R., 2001. Biochemical and Biophysical Research Communications, 287:614–621.
23. Matsudaira, P., and Jammey, P., 1988. Cell, 54:139–140.
24. Kothakota, S., Azuma, T., Reinhard, C., Klippel, A., Tang, J., Chu, K., McGarry, T. J., Kirschner, M. W., Koths, K., Kwiatkowski and Williams, L. T., 1997. Science, 278:294–298.
25. Sun, H. Q., Yamamoto, M., Meijillano, M., and Yin, H. L., 1999. J. Biol. Chem., 274:33179–33182.
26. Way, M., and Weeds, A., 1988. J. Mol. Biol., 203:1127–1133.
27. Burtnick, L. D., Koepf, E. K., Grimes, J., Jones, E. Y., Stuart, D. I., Mclaughlin, P. J., and Robinson, R. C., 1997. Cell, 90:661–670.
28. Way, M., Gooch, J., Pope, B., and Weeds, A. G., 1989. J. Cell. Biol., 109:593–605.
29. Way, M., Pope, B., Gooch, J., Hawkins, M., and Weeds, A. G., 1990. EMBO J., 9:4103–4109.
30. McLaughlin, P. J., Gooch, J. T., Mannherz, H. G., and Weeds, A. G., 1993. Nature, 364:685–692.
31. Doudna, J. A., and Cech, T. R., 1995. RNA, 1:36–45.
32. Heyduk, E., and Heyduk, T., 1994. Biochemistry, 33:9643–9650.
33. Guan, J.-Q., Almo, S. C., and Chance, M. R., 2001. Biophysical J., 80:334a
34. Kiselar, J. G., Sullivan, M., and Chance, M. R., 2001. Int. J. Rad. Biol., in press
35. Moffat, K., 1998. Acta Crystallography A., 54:833–841.
36. Teng, T. Y., Srajer, V., and Moffat, K., 1997. Biochemistry, 36:12087–12100.
37. Srajer, V., Teng, T. Y., Ursby, T., Pradervand, C., Ren, Z., Adachi, S., Schildkamp, W., Bourgeois, D., Wullff, M., and Moffat, K., 1996. Science, 274:1726–1729.
38. Rich, A., 1998. Proc. Natl. Acad. Sci. Vol. 95, 13999–13400. USA
39. Simmons, R., 1996. Curr. Biol., 6:392–394.
40. Harada, Y., Funatsu, T., Tokunaga, M., Saito, K., Higuchi, H., Ishii, Y., and Yanagida, T., 1998. Methods Cell Biol., 55:117–128.
41. Bosshard, H. R., 1979. Methods Biochem. Anal., 25:273–301.
42. Matsudaira, P., 1991. Trends Biochem Sci., 16:87–92.
43. deArruda, M. V., Bazari, H., Wallek, M., and Matsudaira, P., 1992. J. Biol. Chem., 267:13079–13085.
44. Sosnick, T. R., Mayne, L., Hiller, R., and Englander, S. W., 1994. Nat. Struct. Biol., 1:149–156.