Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation

Plant Physiology

Volumn 125, Issue 3, 2001, Pages 1325-1341

  Draye, X ^a   Lin, Y R ^a   Qian, X Y ^a   Bowers, J E ^a   Burow, G B ^a   Morrell, P L ^a   Peterson, D G ^a   Presting, G G ^a   Ren, S X ^a   Wing, R A ^a   Paterson, A H ^a  

^a UNIVERSITY OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; BACTERIAL ARTIFICIAL CHROMOSOME; COMPARATIVE GENOMIC HYBRIDIZATION; DNA FINGERPRINTING; GENE MAPPING; GENE POOL; GENETIC VARIANCE; GENOME ANALYSIS; GENOME SIZE; QUANTITATIVE TRAIT LOCUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

ARABIDOPSIS; BACTERIA (MICROORGANISMS); EMBRYOPHYTA; ORYZA SATIVA; POACEAE; SACCHARUM; SACCHARUM HYBRID CULTIVAR; SORGHUM BICOLOR; TRITICUM AESTIVUM; ZEA MAYS;

EID: 0035099613     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.125.3.1325     Document Type: Article

References (96)

1. Mapping QTLs in breeding for drought tolerance in maize (Zea mays L.)
2. High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative trait locus in tomato
3. Characterization of 14 different putative protein kinase cDNA clones of the C-4 plant Sorghum bicolor
4. Nuclear DNA content of some important plant species
5. Comparative mapping in F-2:3 and F-6:7 generations of quantitative trait loci for grain yield and yield components in maize
6. Genetic resolution and verification of quantitative trait loci for flowering and plant height with recombinant inbred lines of maize
7. Detection of quantitative trait loci for grain yield and yield components in maize across generations in stress and nonstress environments
8. Chromosome size in maize and sorghum using EM serial section reconstructed nuclei
9. Grasses as a single genetic system: Genome composition, collinearity and compatibility
10. QTL mapping in tropical maize .2. Comparison of genomic regions for resistance to Diatraea spp.
11. Analysis of the quality and utility of random shotgun sequencing at low redundancies
12. A high-density 2399-locus genetic map of Sorghum
13. Quantitative trait loci and metabolic pathways: Genetic control of the concentration of maysin, a corn earworm resistance factor, in maize silks
14. An anchored framework BAC map of mouse chromosome 11 assembled using multiplex oligonucleotide hybridization
15. Saturated molecular map of the rice genome based on an interspecific backcross population
16. Integration of genetic and cytogenetic maps reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice
17. A detailed RFLP map of Sorghum bicolor × S. propinquum, suitable for high-density mapping, suggests ancestral duplication of sorghum chromosomes or chromosomal segments
18. Andropogoneae
19. Exploring the metabolic and genetic control of gene expression on a genomic scale
20. Cytogenetics of introgression from Saccharum into Sorghum
21. Teosinteglume architecture (TGA1), a locus differentiating maize and teosinte
22. Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing Aegilops species
23. Plant comparative genetics after 10 years
24. Maize as a model for the evolution of plant nuclear genomes
25. FISH of a maize sh2-selected sorghum BAC to chromosomes of Sorghum bicolor
26. QTL mapping in tropical maize: III. Genomic regions for resistance to Diatraea spp. and associated traits in two RIL populations
27. Karyotype analysis of seven species in the genus Sorghum
28. DNA sequence variation and the recombinational landscape in Drosophila pseudoobscura: A study of the second chromosome
29. Organization of heterologous DNA inserts on the mouse meiotic chromosome core
30. Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes
31. A conserved repetitive DNA element located in the centromeres of cereal chromosomes
32. Molecular mapping of QTL for southwestern corn borer resistance, plant height and flowering in tropical maize
33. A high-throughput AFLP-based method for constructing integrated genetic and physical maps: Progress toward a sorghum genome map
34. Comparative mapping of Arabidopsis thaliana and Brassica oleracea chromosomes reveals islands of conserved organization
35. MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations
36. Identification of QTL for drought responses in maize and their use in testing causal relationships between traits
37. Locus-specific contig assembly in highly-duplicated genomes, using the BAC-RF method
38. Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population
39. A Sorghum propinquum BAC library, suitable for cloning genes associated with loss-of-function mutations during crop domestication
40. The evolutionary history of the Poales/Restionales: A hypothesis
41. Coming to grips with a complex matter: A multidisciplinary approach to the synaptonemal complex
42. Morphological characters of teosinte chromosomes
43. QTL mapping in testcrosses of European flint lines of maize 1: Comparison of different testers for forage yield traits
44. Rice transposable elements: A survey of 73,000 sequence-tagged connectors
45. Identification of quantitative trait loci controlling resistance to gray leaf spot disease in maize
46. High throughput fingerprint analysis of large-insert clones
47. Duplicate sequences with a similarity to expressed genes in the genome of Arabidopsis thaliana
48. Importance of anchor genomes for any plant genome project
49. Cloning and characterization of a centromere-specific repetitive DNA element from Sorghum bicolor
50. Detailed alignment of Saccharum and sorghum chromosomes: Comparative organization of closely related diploid and polyploid genomes
51. Satellite DNA I in chromatin loops of rat pachytene chromosomes and in spermatids
52. In situ DNA sequence mapping with surface-spread mouse pachytene chromosomes
53. Synaptinemal complex
54. Comparative genomics of plant chromosomes
55. Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato
56. Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence
57. Convergent domestication of cereal crops by independent mutations at corresponding genetic loci
58. The weediness of wild plants: Molecular analysis of genes influencing dispersal and persistence of johnsongrass, Sorghum halepense (L.) pers
59. Identification of genomic regions affecting plant height in sorghum and maize
60. Construction of an RFLP map in sorghum and comparative mapping in maize
61. Localization of single- and low-copy sequences on tomato synaptonemal complex spreads using fluorescence in situ hybridization (FISH)
62. Quantitative trait loci for pain quality, productivity, morphological and agronomical traits in sorghum (Sorghum bicolor 1. Moench)
63. Identification of quantitative trait loci under drought conditions in tropical maize: II. Flowering parameters and the anthesis-silking interval
64. A possible technique for isolating genic DNA for quantitative traits in plants
65. Comparative physical mapping of the 18S-5.8S-26S rDNA in three sorghum species
66. Two-dimensional spreads of synaptonemal complexes from solanaceous plants: V. Tomato (Lycopersicon esculentum) karyotype and idiogram
67. Two-dimensional spreads of synaptonemal complexes from solanaceous plants: VI. High-resolution recombination nodule map for tomato (Lycopersicon esculentum)
68. Pastoral synteny
69. Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
70. Genetic analysis of agronomic traits in a cross between sugarcane (Saccharum officinarum L.) and its presumed progenitor (S-robustum Brandes and Jesw ex grassl)
71. Phylogenetic analysis of chloroplast restriction enzyme site mutations in the Saccharinae Griseb. subtribe of the Andropogoneae Dumort. tribe
72. SAM: A system for iteratively building marker maps
73. FPC: A system for building contigs from restriction fingerprinted clones
74. High-resolution cytological localization of the XhoI and EcoRI repeat sequence in the pachytene ZW bivalent of the chicken
75. Heterochromatin, the synaptonemal complex, and crossing over
76. Construction of a genetic map in a sorghum recombinant inbred line using probes from different sources and its comparison with other sorghum maps
77. Fossil grasses, 1820-1986 and beyond
78. RFLP mapping of quantitative trait loci controlling abscisic acid concentration in leaves of drought-stressed maize (Zea mays L.)
79. Evaluation of near-isogenic sorghum lines contrasting for qtl markers associated with drought tolerance
80. Genetic analysis of post-flowering drought tolerance and components of grain development in sorghum bicolor (1.) Moench
81. Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography
82. Molecular-marker-facilitated studies cbf morphological traits in maize 2: Determination of QTLs for grain-yield and yield components
83. Genetic mapping of quantitative trait loci in maize in stress and nonstress environments 1: Grain yield and yield components
84. Genetic mapping of quantitative trait loci in maize in stress and nonstress environments 2: Plant height and flowering
85. Molecular marker-facilitated studies in an elite maize population 1: Linkage analysis and determination of QTL for morphological traits
86. A new strategy for genome sequencing
87. The limits of selection during maize domestication
88. Comparative genome mapping of sorghum and maize
89. The molecular basis of c-4 photosynthesis in sorghum: Isolation, characterization and RFLP mapping of mesophyll-andbundle-sheath-specific cDNAs obtained by differential screening
90. Fine mapping of quantitative trait loci Hd-1, Hd-2 and Hd-3, controlling heading date of rice, as single mendelian factors
91. Analysis of C-banding patterns of sorghum
92. Macromolecular organization and genetic mapping of a rapidly evolving chromosome-specific tandem repeat family (b77) in cotton (Gossypium)
93. Cloning and characterization of the majority of repetitive DNA in cotton (Gossypium L.)