RNA polymerase: Structural similarities between bacterial RNA polymerase and eukaryotic RNA polymerase II

Journal of Molecular Biology

Volumn 304, Issue 5, 2000, Pages 687-698

  Ebright, R H ^a  

^a RUTGERS UNIVERSITY   (United States)

Author keywords

Elongation complex; Open complex; RNA polymerase; RNA polymerase II; Transcription

Indexed keywords

ELONGATION FACTOR; RNA POLYMERASE; RNA POLYMERASE II;

BACTERIUM; ENZYME STRUCTURE; ENZYME SUBUNIT; EUKARYOTE; GENETIC TRANSCRIPTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN FOLDING; REVIEW; STRUCTURE ANALYSIS;

EID: 0034671288     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.2000.4309     Document Type: Review

References (34)

1. RNA polymerase - An overview
2. An integrated model of the transcription complex in elongation, termination, and editing
3. Transcription elongation: Structural basis and mechanisms
4. RNA polymerase II
5. Yeast RNA polymerase subunits and genes
6. Bacterial RNA polymerase subunit and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly
7. Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 Å resolution
8. Promoter structure, promoter recognition, and transcription activation in prokaryotes
9. Structural organization of the RNA polymerase-promoter open complex
10. Architecture of RNA polymerase II and implications for the transcription mechanism
11. A structural model of transcription elongation
12. Yeast RNA polymerase II at 5 Å resolution
13. Transcription activation at Class II CAP-dependent promoters: Two interactions between CAP and RNA polymerase
14. Transcription activation by catabolite activator protein (CAP)
15. Activation mutants in yeast RNA polymerase II subunit RPB3 provide evidence for a conserved activation target in eukaryotes and bacteria
16. RNA polymerase beta subunit: A target for DNA binding-independent activation
17. A highly conserved domain of RNA polymerase II shares a functional element with acidic activation domains of upstream transcription factors
18. Genetics of transcriptional regulation in yeast: Connections to the RNA polymerase II CTD
19. RNA polymerase II and the integration of nuclear events
20. DNA polymerases: Structural diversity and common mechanisms
21. Structure of the Escherichia coli RNA polymerase α subunit amino-terminal domain
22. 70), promoters, and the kinetics of the steps of transcription initiation
23. The general transcription factors of RNA polymerase II
24. Dissection of two hallmarks of the open promoter complex by mutation in an RNA polymerase core subunit
25. Mutational analysis of β′260-309, a σ70 binding site located on Escherichia coli core RNA polymerase
26. Protein-protein interactions mapped by artificial proteases: Where sigma factors bind to RNA polymerase
27. Mechanism of ATP-dependent promoter melting by transcription factor IIH
28. Topology of yeast RNA polymerase II subunits in transcription elongation complexes studied by photoaffinity crosslinking
29. Electron crystal structure of an RNA polymerase II transcription elongation complex
30. The orientation of DNA in an archaeal transcription initiation complex
31. Charting a course through RNA polymerase
32. Orientation and topography of RNA polymerase III in transcription complexes
33. Database algorithm for generating protein backbone and side-chain coordinates from a Cα trace application to model building and detection of co-ordinate errors
34. Protein structure comparison by alignment of distance matrices