메뉴 건너뛰기




Volumn 14, Issue 3, 2000, Pages 339-348

Activation mutants in yeast RNA polymerase II subunit RPB3 provide evidence for a structurally conserved surface required for activation in eukaryotes and bacteria

Author keywords

Subunit; Activation; RNA polymerase; Transcription

Indexed keywords

PROTEIN SUBUNIT; RNA POLYMERASE II;

EID: 0034142357     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (39)

References (41)
  • 1
    • 0023484186 scopus 로고
    • 5-Fluoroorotic acid as a selective agent in yeast molecular genetics
    • Boeke, J.D., J. Trueheart, G. Natsoulis, and G.R. Fink. 1987. 5-Fluoroorotic acid as a selective agent in yeast molecular genetics. Methods Enzymol. 154: 164-175.
    • (1987) Methods Enzymol. , vol.154 , pp. 164-175
    • Boeke, J.D.1    Trueheart, J.2    Natsoulis, G.3    Fink, G.R.4
  • 2
    • 0031026786 scopus 로고    scopus 로고
    • Transcription activation at class II CAP-dependent promoters
    • Busby, S. and R.H. Ebright. 1997. Transcription activation at class II CAP-dependent promoters. Mol. Microbiol. 23: 853-859.
    • (1997) Mol. Microbiol. , vol.23 , pp. 853-859
    • Busby, S.1    Ebright, R.H.2
  • 3
    • 0032698634 scopus 로고    scopus 로고
    • Transcription activation by catabolite activator protein |CAP)
    • _. 1999. Transcription activation by catabolite activator protein |CAP). J. Mol. Biol. 293: 199-213.
    • (1999) J. Mol. Biol. , vol.293 , pp. 199-213
  • 4
    • 0029775651 scopus 로고    scopus 로고
    • ADR1 activation domains contact the histone acetyltransferase GCN5 and the core transcriptional factor TFIIB
    • Chiang, Y.C., P. Komarnitsky, D. Chase, and C.L. Denis. 1996. ADR1 activation domains contact the histone acetyltransferase GCN5 and the core transcriptional factor TFIIB. J. Biol. Chem. 271: 32359-32365.
    • (1996) J. Biol. Chem. , vol.271 , pp. 32359-32365
    • Chiang, Y.C.1    Komarnitsky, P.2    Chase, D.3    Denis, C.L.4
  • 5
    • 0028933852 scopus 로고
    • The Escherichia coli RNA polymerase a subunit: Structure and function
    • Ebright, R.H. and S. Busby. 1995. The Escherichia coli RNA polymerase a subunit: Structure and function. Curr. Opin. Genet. Dev. 5: 197-203.
    • (1995) Curr. Opin. Genet. Dev. , vol.5 , pp. 197-203
    • Ebright, R.H.1    Busby, S.2
  • 6
    • 0033567215 scopus 로고    scopus 로고
    • Bacterial promoter architecture: Subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase α subunit
    • Estrem, S.T., W. Ross, T. Gaal, Z.W. Chen, W. Niu, R.H. Ebright, and R.L. Gourse. 1999. Bacterial promoter architecture: Subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase α subunit. Genes & Dev. 13: 2134-2147.
    • (1999) Genes & Dev. , vol.13 , pp. 2134-2147
    • Estrem, S.T.1    Ross, W.2    Gaal, T.3    Chen, Z.W.4    Niu, W.5    Ebright, R.H.6    Gourse, R.L.7
  • 7
    • 0032496371 scopus 로고    scopus 로고
    • The interacting RNA polymerase II subunits, hRPB1 1 and hRPB3, are coordinately expressed in adult human tissues and down-regulated by doxorubicin
    • Fanciulli, M., T. Bruno, M. Di Padova, R. De Angelis, S. Lovari, A. Floridi, and C. Passananti. 1998. The interacting RNA polymerase II subunits, hRPB1 1 and hRPB3, are coordinately expressed in adult human tissues and down-regulated by doxorubicin. FEBS Lett. 427: 236-240.
    • (1998) FEBS Lett. , vol.427 , pp. 236-240
    • Fanciulli, M.1    Bruno, T.2    Di Padova, M.3    De Angelis, R.4    Lovari, S.5    Floridi, A.6    Passananti, C.7
  • 9
    • 0025072237 scopus 로고
    • Stringent spacing requirements for transcription activation by CRP
    • Gaston, K., A. Bell, A. Kolb, H. Buc, and S. Busby. 1990. Stringent spacing requirements for transcription activation by CRP. Cell 62: 733-743.
    • (1990) Cell , vol.62 , pp. 733-743
    • Gaston, K.1    Bell, A.2    Kolb, A.3    Buc, H.4    Busby, S.5
  • 10
    • 0030961651 scopus 로고    scopus 로고
    • RNA polymerase II holoenzyme and transcriptional regulation
    • Greenblatt, J. 1997. RNA polymerase II holoenzyme and transcriptional regulation. Curr. Opin. Cell. Biol. 9: 310-319.
    • (1997) Curr. Opin. Cell. Biol. , vol.9 , pp. 310-319
    • Greenblatt, J.1
  • 11
    • 0027515605 scopus 로고
    • Synthetic enhancement in gene interaction: A genetic tool come of age
    • Guarente, L. 1993. Synthetic enhancement in gene interaction: A genetic tool come of age. Trends Genet. 9: 362-366.
    • (1993) Trends Genet. , vol.9 , pp. 362-366
    • Guarente, L.1
  • 12
    • 0029836226 scopus 로고    scopus 로고
    • Determinants of RNA polymerase a subunit for interaction with β, β', and σ subunits: Hydroxyl-radical protein footprinting
    • Heyduk, T., E. Heyduk, K. Severinov, H. Tang, and R.H. Ebright. 1996. Determinants of RNA polymerase a subunit for interaction with β, β', and σ subunits: Hydroxyl-radical protein footprinting. Proc. Natl. Acad. Sci. 93: 10162-10166.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 10162-10166
    • Heyduk, T.1    Heyduk, E.2    Severinov, K.3    Tang, H.4    Ebright, R.H.5
  • 13
    • 0024520745 scopus 로고
    • Site-directed mutagenesis by overlap extension using the polymerase chain reaction
    • Ho, S.N., H.D. Hunt, R.M. Horton, J.K. Pullen, and L.R. Pease. 1989. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77: 51-59.
    • (1989) Gene , vol.77 , pp. 51-59
    • Ho, S.N.1    Hunt, H.D.2    Horton, R.M.3    Pullen, J.K.4    Pease, L.R.5
  • 14
    • 0032546738 scopus 로고    scopus 로고
    • Two large subunits of the fission yeast RNA polymerase II provide platforms for the assembly of small subunits
    • Ishiguro, A., M. Kimura, K. Yasui, A. Iwata, S. Ueda, and A. Ishihama. 1998. Two large subunits of the fission yeast RNA polymerase II provide platforms for the assembly of small subunits. J. Mol. Biol. 279: 703-712.
    • (1998) J. Mol. Biol. , vol.279 , pp. 703-712
    • Ishiguro, A.1    Kimura, M.2    Yasui, K.3    Iwata, A.4    Ueda, S.5    Ishihama, A.6
  • 16
    • 0029609246 scopus 로고
    • Functional map of the α subunit of Escherichia coli RNA polymerase: Amino acid substitution within the amino-terminal assembly domain
    • Kimura, M. and A. Ishihama. 1995a. Functional map of the α subunit of Escherichia coli RNA polymerase: Amino acid substitution within the amino-terminal assembly domain. J. Mol. Biol. 254: 342-349.
    • (1995) J. Mol. Biol. , vol.254 , pp. 342-349
    • Kimura, M.1    Ishihama, A.2
  • 17
    • 0029056377 scopus 로고
    • Functional map of the α subunit of Escherichia coli RNA polymerase: Insertion analysis of the amino-terminal assembly domain
    • _. 1995b. Functional map of the α subunit of Escherichia coli RNA polymerase: Insertion analysis of the amino-terminal assembly domain. J. Mol. Biol. 248: 756-767.
    • (1995) J. Mol. Biol. , vol.248 , pp. 756-767
  • 18
    • 0030881610 scopus 로고    scopus 로고
    • RNA polymerase II subunits 2, 3, and 11 form a core subassembly with DNA binding activity
    • Kimura, M., A. Ishiguro, and A. Ishihama. 1997. RNA polymerase II subunits 2, 3, and 11 form a core subassembly with DNA binding activity. J. Biol. Chem. 272: 25851-25855.
    • (1997) J. Biol. Chem. , vol.272 , pp. 25851-25855
    • Kimura, M.1    Ishiguro, A.2    Ishihama, A.3
  • 19
    • 0024355424 scopus 로고
    • RNA polymerase II subunit RPB3 is an essential component of the mRNA transcription apparatus
    • Kolodziej, P. and R.A. Young. 1989. RNA polymerase II subunit RPB3 is an essential component of the mRNA transcription apparatus. Mol. Cell. Biol. 9: 5387-5394.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 5387-5394
    • Kolodziej, P.1    Young, R.A.2
  • 20
    • 0025767136 scopus 로고
    • Mutations in the three largest subunits of yeast RNA polymerase II that affect enzyme assembly
    • _. 1991. Mutations in the three largest subunits of yeast RNA polymerase II that affect enzyme assembly. Mol. Cell. Biol. 11: 4669-4678.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 4669-4678
  • 21
    • 0030992775 scopus 로고    scopus 로고
    • Reconstitution of yeast and Arabidopsis RNA polymerase α-like subunit heterodimers
    • Larkin, R.M. and T.J. Guilfoyle. 1997. Reconstitution of yeast and Arabidopsis RNA polymerase α-like subunit heterodimers. J. Biol. Chem. 272: 12824-12830.
    • (1997) J. Biol. Chem. , vol.272 , pp. 12824-12830
    • Larkin, R.M.1    Guilfoyle, T.J.2
  • 22
    • 0026300116 scopus 로고
    • RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro
    • Liao, S.M., I.C. Taylor, R.E. Kingston, and R.A. Young. 1991. RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro. Genes & Dev. 5: 2431-2440.
    • (1991) Genes & Dev. , vol.5 , pp. 2431-2440
    • Liao, S.M.1    Taylor, I.C.2    Kingston, R.E.3    Young, R.A.4
  • 23
    • 0032832602 scopus 로고    scopus 로고
    • Isolation and characterization of temperature-sensitive mutations in the gene (rpb3) for subunit 3 of RNA polymerase II in the fission yeast Schizosaccharomyces pombe
    • Mitobe, J., H. Mitsuzawa, K. Yasui, and A. Ishihama. 1999. Isolation and characterization of temperature-sensitive mutations in the gene (rpb3) for subunit 3 of RNA polymerase II in the fission yeast Schizosaccharomyces pombe. Mol. & Gen. Genet. 262: 73-84.
    • (1999) Mol. & Gen. Genet. , vol.262 , pp. 73-84
    • Mitobe, J.1    Mitsuzawa, H.2    Yasui, K.3    Ishihama, A.4
  • 24
    • 0026501752 scopus 로고
    • A rapid method for localized mutagenesis of yeast genes
    • Muhlrad, D., R. Hunter, and R. Parker. 1992. A rapid method for localized mutagenesis of yeast genes. Yeast 8: 79-82.
    • (1992) Yeast , vol.8 , pp. 79-82
    • Muhlrad, D.1    Hunter, R.2    Parker, R.3
  • 25
    • 0031056544 scopus 로고    scopus 로고
    • The two a subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element
    • Murakami, K., M. Kimura, J.T. Owens, C.F. Meares, and A. Ishihama. 1997. The two a subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element. Proc. Natl. Acad. Sci. 94: 1709-1714.
    • (1997) Proc. Natl. Acad. Sci. , vol.94 , pp. 1709-1714
    • Murakami, K.1    Kimura, M.2    Owens, J.T.3    Meares, C.F.4    Ishihama, A.5
  • 26
    • 0032561189 scopus 로고    scopus 로고
    • RNA polymerase II holoenzymes and subcomplexes
    • Myer, V.E. and R.A. Young. 1998. RNA polymerase II holoenzymes and subcomplexes. J. Biol. Chem. 273: 27757-27760.
    • (1998) J. Biol. Chem. , vol.273 , pp. 27757-27760
    • Myer, V.E.1    Young, R.A.2
  • 28
    • 0030582675 scopus 로고    scopus 로고
    • Transcription activation at class II CAP-dependent promoters: Two interactions between CAP and RNA polymerase
    • Niu, W., Y. Kim, G. Tau, T. Heyduk, and R.H. Ebright. 1996. Transcription activation at class II CAP-dependent promoters: Two interactions between CAP and RNA polymerase. Cell 87: 1123-1134.
    • (1996) Cell , vol.87 , pp. 1123-1134
    • Niu, W.1    Kim, Y.2    Tau, G.3    Heyduk, T.4    Ebright, R.H.5
  • 29
    • 0030861863 scopus 로고    scopus 로고
    • Transcription activation at class II CRP-dependent promoters: The role of different activating regions
    • Rhodius, V.A., D.M. West, C.L. Webster, S.J.W. Busby, and N.J. Savery. 1997. Transcription activation at class II CRP-dependent promoters: The role of different activating regions. Nucleic Acids Res. 25: 326-332.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 326-332
    • Rhodius, V.A.1    West, D.M.2    Webster, C.L.3    Busby, S.J.W.4    Savery, N.J.5
  • 31
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski, R.S. and P. Hieter. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122: 19-27.
    • (1989) Genetics , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 32
    • 0032079709 scopus 로고    scopus 로고
    • Rpb3, stoichiometry and sequence determinants of the assembly into yeast RNA polymerase II in vivo
    • Svetlov, V., K. Nolan, and R.R. Burgess. 1998. Rpb3, stoichiometry and sequence determinants of the assembly into yeast RNA polymerase II in vivo. J. Biol. Chem. 273: 10827-10830.
    • (1998) J. Biol. Chem. , vol.273 , pp. 10827-10830
    • Svetlov, V.1    Nolan, K.2    Burgess, R.R.3
  • 33
    • 0001312016 scopus 로고
    • Preparation of yeast media
    • ed. K. Janssen. Greene Publishing Associates/John Wiley & Sons, New York, NY
    • Treco, D.A. and V. Lundblad. 1993. Preparation of yeast media. In Current protocols in molecular biology (ed. K. Janssen), pp. 13.11.11-13.11.17. Greene Publishing Associates/John Wiley & Sons, New York, NY.
    • (1993) Current Protocols in Molecular Biology , pp. 131111-131117
    • Treco, D.A.1    Lundblad, V.2
  • 34
    • 0025788283 scopus 로고
    • Zinc-binding subunits of yeast RNA polymerases
    • Treich, I., M. Riva, and A. Sentenac. 1991. Zinc-binding subunits of yeast RNA polymerases. J. Biol. Chem. 266: 21971-21976.
    • (1991) J. Biol. Chem. , vol.266 , pp. 21971-21976
    • Treich, I.1    Riva, M.2    Sentenac, A.3
  • 35
    • 0029867431 scopus 로고    scopus 로고
    • Association between 36- and 13.6-kDa α-like subunits of Arabidopsis thaliana RNA polymerase II
    • Ulmasov, T., R.M. Larkin, and T.J. Guilfoyle. 1996. Association between 36- and 13.6-kDa α-like subunits of Arabidopsis thaliana RNA polymerase II. J. Biol. Chem. 271: 5085-5094.
    • (1996) J. Biol. Chem. , vol.271 , pp. 5085-5094
    • Ulmasov, T.1    Larkin, R.M.2    Guilfoyle, T.J.3
  • 37
    • 0021152709 scopus 로고
    • Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiae
    • Winston, F., D.T. Chaleff, B. Valent, and G.R. Fink. 1984. Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiae. Genetics 107: 179-197.
    • (1984) Genetics , vol.107 , pp. 179-197
    • Winston, F.1    Chaleff, D.T.2    Valent, B.3    Fink, G.R.4
  • 38
    • 0025778740 scopus 로고
    • Transcriptional activation in an improved whole-cell extract from Saccharomyces cerevisiae
    • Wootner, M., P.A. Wade, J. Bonner, and J.A. Jaehning. 1991. Transcriptional activation in an improved whole-cell extract from Saccharomyces cerevisiae. Mol. Cell. Biol. 11: 4555-4560.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 4555-4560
    • Wootner, M.1    Wade, P.A.2    Bonner, J.3    Jaehning, J.A.4
  • 39
    • 0025739871 scopus 로고
    • RNA polymerase II
    • Young, R.A. 1991. RNA polymerase II. Annu. Rev. Biochem. 60: 689-715.
    • (1991) Annu. Rev. Biochem. , vol.60 , pp. 689-715
    • Young, R.A.1
  • 40
    • 0032504132 scopus 로고    scopus 로고
    • Structure of the Escherichia coli RNA polymerase α subunit amino-terminal domain
    • Zhang, G. and S.A. Darst. 1998. Structure of the Escherichia coli RNA polymerase α subunit amino-terminal domain. Science 281: 262-266.
    • (1998) Science , vol.281 , pp. 262-266
    • Zhang, G.1    Darst, S.A.2
  • 41
    • 0033578701 scopus 로고    scopus 로고
    • Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 Å resolution
    • Zhang, G., E.A. Campbell, L. Minakhin, C. Richter, K. Severinov, and S.A. Darst. 1999. Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 Å resolution. Cell 98: 811-824.
    • (1999) Cell , vol.98 , pp. 811-824
    • Zhang, G.1    Campbell, E.A.2    Minakhin, L.3    Richter, C.4    Severinov, K.5    Darst, S.A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.