Synthesis and characterization of a β-hairpin peptide that represents a 'core module' of bovine pancreatic trypsin inhibitor (BPTI)

Biochemistry

Volumn 39, Issue 27, 2000, Pages 7927-7937

  Carulla, Natalia ^a   Woodward, Clare ^b   Barany, George ^a  

^a University of Minnesota ^*  (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMIDE; APROTININ; PEPTIDE; PROTON;

ARTICLE; CIRCULAR DICHROISM; CROSS LINKING; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN SECONDARY STRUCTURE; SYNTHESIS;

AMINO ACID SEQUENCE; ANIMALS; APROTININ; CATTLE; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PEPTIDE FRAGMENTS; PROTEIN CONFORMATION;

BOVINAE;

EID: 0034636847     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi992927l     Document Type: Article

References (64)

1. Li, R., and Woodward, C. (1999) Protein Sci. 8, 1571-1590.
2. Pan, H., Barbar, E., Barany, G., and Woodward, C. (1995) Biochemistry 34, 13974-13981.
3. Barbar, E., Barany, G., and Woodward, C. (1995) Biochemistry 34, 11423-11434.
4. Barbar, E. (1999) Biopolymers 51, 191-207.
5. Blanco, F., Ramírez-Alvarado, M., and Serrano, L. (1998) Curr. Opin. Struct. Biol. 8, 107-111.
6. Gellman, S. H. (1998) Curr. Opin. Chem. Biol. 2, 717-725.
7. Blanco. F. J., Jiménez, M. A., Herranz, J., Rico, M., Santoro, J., and Nieto, J. L. (1993) J. Am. Chem. Soc. 115, 5887-5888.
8. Ramírez-Alvarado, M., Blanco, F. J., and Serrano, L. (1996) Nat. Struct. Biol. 3, 604-612.
9. De Alba, E., Jiménez, M. A., Rico, M., and Nieto, J. L. (1996) Folding Des. 1, 133-144.
10. Ramírez-Alvarado, M., Blanco, F. J., Niemann, H., and Serrano, L. (1997) J. Mol. Biol. 273, 898-912.
11. De Alba, E., Rico, M., and Jiménez, M. A. (1997) Protein Sci. 6, 2548-2560.
12. De Alba, E., Jiménez, M. A., and Rico, M. (1997) J. Am. Chem. Soc. 119, 175-183.
13. Stanger, H. E., and Gellman, S. H. (1998) J. Am. Chem. Soc. 120, 4236-4237.
14. Maynard, A. J., Sharman, G. J., and Searle, M. S. (1998) J. Am. Chem. Soc. 120, 1996-2007.
15. Cox, J. P. L., Evans, P. A., Packman, L. C., Williams, D. H., and Woolfson, D. N. (1993) J. Mol. Biol. 234, 483-492.
16. Blanco, F. J., Jiménez, M. A., Pineda, A., Rico, M., Santoro, J., and Nieto, J. L. (1994) Biochemistry 33, 6004-6014.
17. Blanco, F. J., Rivas, G., and Serrano, L. (1994) Nat. Struct. Biol. 1, 584-590.
18. Searle, M. S., Williams, D. H., and Packman, L. C. (1995) Nat. Struct. Biol. 2, 999-1006.
19. Haque, T. S., and Gellman, S. H. (1997) J. Am. Chem. Soc. 119, 2303-2304.
20. Ramírez-Alvarado, M., Serrano, L., and Blanco, F. J. (1997) Protein Sci. 6, 162-174.
21. Zerella, R., Evans, P. A., Ionides, J. M. C., Packman, L. C., Trotter, B. W., Mackay, J. P., and Williams, D. H. (1999) Protein Sci. 8, 1320-1331.
22. Barany, G., Gross, C. M., Ferrer, M., Barbar, E., Pan, H., and Woodward, C. (1996) Techniques in Protein Chemistry VII, pp 503-514, Academic Press, San Diego, CA.
23. Han, Y., Albericio, F., and Barany, G. (1997) J. Org. Chem. 62, 4307-4312.
24. Griesinger, C., Otting, G., Wüthrich, K., and Ernst, R. R. (1988) J. Am. Chem. Soc. 110, 7870-7872.
25. Kumar, A., Ernst, R. R., and Wüthrich, K. (1980) Biochem. Biophys. Res. Commun. 95, 1-6.
26. Piotto, M., Saudek, V., and Sklenár, V. (1992) J. Biomol NMR 2, 661-665.
27. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) J. Biomol. NMR 6, 277-293.
28. Johnson, B. A., and Blevins, R. A. (1994) J. Biomol. NMR 4, 603-614.
29. Brunger, A. (1992) X-Plor (Version 3.1) Manual, Yale University Press, New Haven, CT.
30. Wright, P. E., Dyson, J. H., and Lerner, R. A. (1988) Biochemistry 27, 7167-7175.
31. Dyson, J. H., and Wright, P. E. (1991) Annu. Rev. Biophys. Biophys. Chem. 20, 519-538.
32. Dyson, J. H., and Wright, P. E. (1993) Curr. Opin. Struct. Biol. 3, 60-65.
33. Mayo, K. H. (1997) Methods Enzymol. 289, 646-672.
34. McDonald, I., Naylor, D., Jones, D., and Thornton, J. (1993) HBPLUS, Department of Biochemistry and Molecular Biology, University College London.
35. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
36. McDonnell, J. M., Fusham, D., Cahill, S. M., Sutton, B. J., and Cowburn, D. (1997) J. Am. Chem. Soc. 119, 5321-5328.
37. Syud, F. A., Espinosa, J. F., and Gellman, S. H. (1999) J. Am. Chem. Soc. 121, 11577-11578.
38. Hutchinson, E. G., and Thornton, J. M. (1994) Protein Sci. 3, 2207-2216.
39. Woody, R. W. (1978) Biopolymers 17, 1451-1467.
40. Oas, T. G., and Kim, P. S. (1988) Nature 336, 42-48.
41. Goodman, E. M., and Kim, P. S. (1989) Biochemistry 28, 4343-4347.
42. Staley, J. P., and Kim, P. S. (1990) Nature 344, 685-688.
43. Goodman, E. M., and Kim, P. S. (1990) Curr. Res. Protein Chem., 301-308.
44. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids, John Wiley, New York.
45. Reymond, M. T., Merutka, G., Dyson, J. H., and Wright, P. E. (1997) Protein Sci. 6, 706-716.
46. Padmanabhan, S., Jiménez, M. A., and Rico, M. (1999) Protein Sci. 8, 1675-1688.
47. Wishart, D. S., Bigam, C. G., Holm, A., Hodges, R. S., and Sykes, B. D. (1995) J. Biomol. NMR 5, 67-81.
48. Merutka, G., Dyson, J. H., and Wright, P. E. (1995) J. Biomol. NMR 5, 14-24.
49. Ösapay, K., and Case, D. A. (1994) J. Biomol. NMR 4, 215-230.
50. Wagner, G., and Wüthrich, K. (1982) J. Mol. Biol. 155, 347-366.
51. Sibanda, B. L., Blundell, T. L., and Thornton, J. M. (1989) J. Mol. Biol. 206, 759-777.
52. Sibanda, B. L., and Thornton, J. M. (1991) Methods Enzymol. 202, 59-82.
53. Ramírez-Alvarado, M., Kortemme, T., Blanco, F. J., and Serrano, L. (1999) Bioorg. Med. Chem. 7, 93-103.
54. Lacroix, E., Kortemme, T., Lopez de la Paz, M., and Serrano, L. (1999) Curr. Opin. Struct. Biol. 9, 487-493.
55. Andersen, N. H., Neidigh, J. W., Harris, S. M., Lee, G. M., Liu, Z., and Tong, H. (1997) J. Am. Chem. Soc. 119, 8547-8561.
56. Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1993) Proteins: Struct., Funct., Genet. 17, 75-86.
57. Blanco, F. J., and Serrano, L. (1995) Eur. J. Biochem. 230, 634-649.
58. Blanco, F. J., Ortiz, A. R., and Serrano, L. (1997) Folding Des. 2, 123-133.
59. Koradi, R., Billeter, M., and Wüthrich, K. (1996) J. Mol. Graphics 14, 51-55.
60. (a) Carulla, N., Woodward, C., and Barany, G. (1999) Fortieth Experimental Nuclear Magnetic Resonance Conference, Orlando, FL, February 28-March 5, 1999.
61. (b) Sixteenth American Peptide Symposium, Minneapolis, MN, June 26-July 1, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Peptides for the New Millennium: Proceedings of the 16th American Peptide Symposium (Fields, G. B., Tam, J. P., and Barany, G., Eds.) pp 36-37, Kluwer Academic Publishers, Dordrecht, The Netherlands. (c) Sixth International Symposium on Solid-Phase Synthesis & Combinatorial Chemical Libraries, York, England, August 31-September 4, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Innovation and Perspectives in Solid-Phase Synthesis & Combinatorial Chemical Libraries, 2000, Collected Papers, Sixth International Symposium (Epton, R., Ed.) Mayflower Scientific, Kingswinford, U.K. (in press).
62. (b) Sixteenth American Peptide Symposium, Minneapolis, MN, June 26-July 1, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Peptides for the New Millennium: Proceedings of the 16th American Peptide Symposium (Fields, G. B., Tam, J. P., and Barany, G., Eds.) pp 36-37, Kluwer Academic Publishers, Dordrecht, The Netherlands. (c) Sixth International Symposium on Solid-Phase Synthesis & Combinatorial Chemical Libraries, York, England, August 31-September 4, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Innovation and Perspectives in Solid-Phase Synthesis & Combinatorial Chemical Libraries, 2000, Collected Papers, Sixth International Symposium (Epton, R., Ed.) Mayflower Scientific, Kingswinford, U.K. (in press).
63. (b) Sixteenth American Peptide Symposium, Minneapolis, MN, June 26-July 1, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Peptides for the New Millennium: Proceedings of the 16th American Peptide Symposium (Fields, G. B., Tam, J. P., and Barany, G., Eds.) pp 36-37, Kluwer Academic Publishers, Dordrecht, The Netherlands. (c) Sixth International Symposium on Solid-Phase Synthesis & Combinatorial Chemical Libraries, York, England, August 31-September 4, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Innovation and Perspectives in Solid-Phase Synthesis & Combinatorial Chemical Libraries, 2000, Collected Papers, Sixth International Symposium (Epton, R., Ed.) Mayflower Scientific, Kingswinford, U.K. (in press).
64. (b) Sixteenth American Peptide Symposium, Minneapolis, MN, June 26-July 1, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Peptides for the New Millennium: Proceedings of the 16th American Peptide Symposium (Fields, G. B., Tam, J. P., and Barany, G., Eds.) pp 36-37, Kluwer Academic Publishers, Dordrecht, The Netherlands. (c) Sixth International Symposium on Solid-Phase Synthesis & Combinatorial Chemical Libraries, York, England, August 31-September 4, 1999; Carulla, N., Woodward, C., and Barany, G. (2000) in Innovation and Perspectives in Solid-Phase Synthesis & Combinatorial Chemical Libraries, 2000, Collected Papers, Sixth International Symposium (Epton, R., Ed.) Mayflower Scientific, Kingswinford, U.K. (in press).