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Volumn 8, Issue 8, 1999, Pages 1675-1688

Folding propensities of synthetic peptide fragments covering the entire sequence of phage 434 Cro protein

Author keywords

434 Cro; Helices; Peptide conformation; Peptide NMR; Protein folding

Indexed keywords

REPRESSOR PROTEIN; UREA; WATER;

EID: 0345362966     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1110/ps.8.8.1675     Document Type: Article
Times cited : (13)

References (91)
  • 1
    • 0028951041 scopus 로고
    • Stabilization of helical domains in short peptides using hydrophobic interactions
    • Albert JS, Hamilton AD. 1995. Stabilization of helical domains in short peptides using hydrophobic interactions. Biochemistry 34:984-990.
    • (1995) Biochemistry , vol.34 , pp. 984-990
    • Albert, J.S.1    Hamilton, A.D.2
  • 2
    • 0006393051 scopus 로고
    • Two-dimensional spectroscopy. Application to nuclear magnetic resonance
    • Aue WP, Bartholdi E, Ernst RR. 1976. Two-dimensional spectroscopy. Application to nuclear magnetic resonance. J Chem Phys 64:2229-2246.
    • (1976) J Chem Phys , vol.64 , pp. 2229-2246
    • Aue, W.P.1    Bartholdi, E.2    Ernst, R.R.3
  • 4
    • 0024391879 scopus 로고
    • How does protein folding get started?
    • Baldwin RL. 1989. How does protein folding get started? Trends in Biochem Sci 14:291-294.
    • (1989) Trends in Biochem Sci , vol.14 , pp. 291-294
    • Baldwin, R.L.1
  • 5
    • 0029028490 scopus 로고
    • α-helix formation by peptides of defined sequence
    • Baldwin RL. 1995. α-helix formation by peptides of defined sequence. Biophys Chem 55:127-135.
    • (1995) Biophys Chem , vol.55 , pp. 127-135
    • Baldwin, R.L.1
  • 6
    • 0024278714 scopus 로고
    • Helix geometry in proteins
    • Barlow DJ, Thornton JM. 1988. Helix geometry in proteins. J Mol Biol 201:601-619.
    • (1988) J Mol Biol , vol.201 , pp. 601-619
    • Barlow, D.J.1    Thornton, J.M.2
  • 7
    • 5144233105 scopus 로고
    • MLEV-17 based two-dimensional homonuclear magnetization transfer spectroscopy
    • Bax A, Davis DG. 1985. MLEV-17 based two-dimensional homonuclear magnetization transfer spectroscopy. J Magn Reson 65:355-360.
    • (1985) J Magn Reson , vol.65 , pp. 355-360
    • Bax, A.1    Davis, D.G.2
  • 8
    • 0011491177 scopus 로고
    • Structure determination of a tetrasaccharide: Transient nuclear Overhauser effects in the rotating frame
    • Bothner-By AA, Stephens RL, Lee JM, Warren CD, Jeanloz RW. 1984. Structure determination of a tetrasaccharide: Transient nuclear Overhauser effects in the rotating frame. J Am Chem Soc 106:811-813.
    • (1984) J Am Chem Soc , vol.106 , pp. 811-813
    • Bothner-By, A.A.1    Stephens, R.L.2    Lee, J.M.3    Warren, C.D.4    Jeanloz, R.W.5
  • 9
    • 0015917504 scopus 로고
    • Derivative spectroscopy applied to tyrosyl chromophores. Studies on ribonuclease, lima bean inhibitors, insulin, and pancreatic trypsin inhibitor
    • Brandts JF, Kaplan KJ. 1973. Derivative spectroscopy applied to tyrosyl chromophores. Studies on ribonuclease, lima bean inhibitors, insulin, and pancreatic trypsin inhibitor. Biochemistry 12:2011-2024.
    • (1973) Biochemistry , vol.12 , pp. 2011-2024
    • Brandts, J.F.1    Kaplan, K.J.2
  • 11
    • 84985733652 scopus 로고
    • 1H NMR parameters of the common amino acid residues measured in aqueous solution of the linear peptides H-Gly-Gly-X-L-Ala-OH
    • 1H NMR parameters of the common amino acid residues measured in aqueous solution of the linear peptides H-Gly-Gly-X-L-Ala-OH. Biopolymers 18:285-297.
    • (1979) Biopolymers , vol.18 , pp. 285-297
    • Bundi, A.1    Wüthrich, K.2
  • 14
    • 0032554626 scopus 로고    scopus 로고
    • Protein folding dynamics: Quantitative comparison between theory and experiment
    • Burton RE, Myers JK, Oas TG. 1998. Protein folding dynamics: Quantitative comparison between theory and experiment. Biochemistry 37:5337-5343.
    • (1998) Biochemistry , vol.37 , pp. 5337-5343
    • Burton, R.E.1    Myers, J.K.2    Oas, T.G.3
  • 15
    • 0028222235 scopus 로고
    • Helix propensities of amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions
    • Chakrabartty A, Kortemme T, Baldwin RL. 1994. Helix propensities of amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions. Protein Sci 3:843-852.
    • (1994) Protein Sci , vol.3 , pp. 843-852
    • Chakrabartty, A.1    Kortemme, T.2    Baldwin, R.L.3
  • 16
    • 0027298784 scopus 로고
    • Aromatic side-chain contribution to the far-ultraviolet circular dichroism of helical peptides and its effects on the measurements of helix propensities
    • Chakrabartty A, Kortemme T, Padmanabhan S, Baldwin RL. 1993. Aromatic side-chain contribution to the far-ultraviolet circular dichroism of helical peptides and its effects on the measurements of helix propensities. Biochemistry 32:5560-5565.
    • (1993) Biochemistry , vol.32 , pp. 5560-5565
    • Chakrabartty, A.1    Kortemme, T.2    Padmanabhan, S.3    Baldwin, R.L.4
  • 17
    • 0000367088 scopus 로고
    • Two point calibration of circular dichrometer with d-10-camphorsulfonic acid
    • Chen GC, Yang JT. 1977. Two point calibration of circular dichrometer with d-10-camphorsulfonic acid. Anal Lett 10:1195-1207.
    • (1977) Anal Lett , vol.10 , pp. 1195-1207
    • Chen, G.C.1    Yang, J.T.2
  • 18
    • 1842298212 scopus 로고    scopus 로고
    • From Levinthal to pathways to funnels
    • Dill KA, Chan HS. 1997. From Levinthal to pathways to funnels. Nature Struct Biol 4:10-19.
    • (1997) Nature Struct Biol , vol.4 , pp. 10-19
    • Dill, K.A.1    Chan, H.S.2
  • 19
    • 0029020484 scopus 로고
    • N- and C-capping preferences for all 20 amino acids in α-helical peptides
    • Doig AD, Baldwin RL. 1995. N- and C-capping preferences for all 20 amino acids in α-helical peptides. Protein Sci 4:1325-1336.
    • (1995) Protein Sci , vol.4 , pp. 1325-1336
    • Doig, A.D.1    Baldwin, R.L.2
  • 20
    • 0026768829 scopus 로고
    • Folding of peptide fragments comprising the complete sequence of proteins. Models for initiation of protein folding I. Myohemerythrin
    • Dyson HJ, Merutka G, Waltho JP, Lerner RA, Wright PE. 1992. Folding of peptide fragments comprising the complete sequence of proteins. Models for initiation of protein folding I. Myohemerythrin. J Mol Biol 226:795-817.
    • (1992) J Mol Biol , vol.226 , pp. 795-817
    • Dyson, H.J.1    Merutka, G.2    Waltho, J.P.3    Lerner, R.A.4    Wright, P.E.5
  • 21
    • 0025904730 scopus 로고
    • Defining solution conformations of small linear peptides
    • Dyson HJ, Wright PE. 1991. Defining solution conformations of small linear peptides. Annu Rev Biophys Biophys Chem 20:519-538.
    • (1991) Annu Rev Biophys Biophys Chem , vol.20 , pp. 519-538
    • Dyson, H.J.1    Wright, P.E.2
  • 22
    • 0014109212 scopus 로고
    • Spectroscopic determination of tryptophan and tyrosine in proteins
    • Edelhoch H. 1967. Spectroscopic determination of tryptophan and tyrosine in proteins. Biochemistry 6:1948-1954.
    • (1967) Biochemistry , vol.6 , pp. 1948-1954
    • Edelhoch, H.1
  • 23
    • 0024448151 scopus 로고
    • Calculation of protein extinction coefficients from amino acid sequence data
    • Gill SC, von Hippel PH. 1989. Calculation of protein extinction coefficients from amino acid sequence data. Anal Biochem 182:319-326.
    • (1989) Anal Biochem , vol.182 , pp. 319-326
    • Gill, S.C.1    Von Hippel, P.H.2
  • 24
    • 0029588554 scopus 로고
    • High helical propensity of peptide fragments derived from β-globulin, a predominantly β-sheet protein
    • Hamada D, Kuroda Y, Toshiki T, Goto Y. 1995. High helical propensity of peptide fragments derived from β-globulin, a predominantly β-sheet protein. J Mol Biol 254:737-746.
    • (1995) J Mol Biol , vol.254 , pp. 737-746
    • Hamada, D.1    Kuroda, Y.2    Toshiki, T.3    Goto, Y.4
  • 25
    • 0032536194 scopus 로고    scopus 로고
    • Group additive contributions to the alcohol-induced α-helix formation of melittin: Implication for the mechanism of the alcohol effects on proteins
    • Hirota N, Mizuno K, Goto Y. 1998. Group additive contributions to the alcohol-induced α-helix formation of melittin: Implication for the mechanism of the alcohol effects on proteins. J Mol Biol 275:365-378.
    • (1998) J Mol Biol , vol.275 , pp. 365-378
    • Hirota, N.1    Mizuno, K.2    Goto, Y.3
  • 26
    • 11344291497 scopus 로고
    • The ultraviolet circular dichroism of polypeptides
    • Holzwarth G, Doty P. 1965. The ultraviolet circular dichroism of polypeptides. J Am Chem Soc 87-218-228.
    • (1965) J Am Chem Soc , vol.87 , pp. 218-228
    • Holzwarth, G.1    Doty, P.2
  • 27
    • 0000478940 scopus 로고
    • General method for the rapid solid-phase synthesis of large numbers of peptides: Specificity of antigen-antibody interaction at the level of individual amino acids
    • Houghten RA. 1985. General method for the rapid solid-phase synthesis of large numbers of peptides: Specificity of antigen-antibody interaction at the level of individual amino acids. Proc Natl Acad Sci USA 82:5131-5135.
    • (1985) Proc Natl Acad Sci USA , vol.82 , pp. 5131-5135
    • Houghten, R.A.1
  • 28
    • 0028935887 scopus 로고
    • Structure and stability of monomeric λ-repressor. NMR evidence for two-state folding
    • Huang GS, Oas TG. 1995a. Structure and stability of monomeric λ-repressor. NMR evidence for two-state folding. Biochemistry 34:3884-3892.
    • (1995) Biochemistry , vol.34 , pp. 3884-3892
    • Huang, G.S.1    Oas, T.G.2
  • 29
    • 0029151158 scopus 로고
    • Sub-millisecond folding of monomeric λ-repressor
    • Huang GS, Oas TG. 1995b. Sub-millisecond folding of monomeric λ-repressor. Proc Natl Acad Sci USA 92:6878-6882.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 6878-6882
    • Huang, G.S.1    Oas, T.G.2
  • 30
    • 0028848469 scopus 로고
    • Search for nucleation fragments in smaller fragments of chymostrypsin inhibitor 2
    • Itzhaki L, Neira JL, Ruiz-Sanz J, de Prat Gay G, Fersht A. 1995. Search for nucleation fragments in smaller fragments of chymostrypsin inhibitor 2. J Mol Biol 254:289-304.
    • (1995) J Mol Biol , vol.254 , pp. 289-304
    • Itzhaki, L.1    Neira, J.L.2    Ruiz-Sanz, J.3    De Prat Gay, G.4    Fersht, A.5
  • 31
    • 0031815749 scopus 로고    scopus 로고
    • How do small single-domain proteins fold?
    • Jackson SE. 1998. How do small single-domain proteins fold? Folding Design 3:R81-R91.
    • (1998) Folding Design , vol.3
    • Jackson, S.E.1
  • 33
    • 0028838504 scopus 로고
    • Effects of trifluoroethanol on the conformations of peptides representing the entire sequence of bovine pancreatic trypsin inhibitor
    • Kemmink J, Creighton T. 1995a. Effects of trifluoroethanol on the conformations of peptides representing the entire sequence of bovine pancreatic trypsin inhibitor. Biochemistry 34:12630-12635.
    • (1995) Biochemistry , vol.34 , pp. 12630-12635
    • Kemmink, J.1    Creighton, T.2
  • 34
    • 0028878268 scopus 로고
    • The physical properties of local interactions of tyrosine residues in peptides and unfolded proteins
    • Kemmink J, Creighton T. 1995b. The physical properties of local interactions of tyrosine residues in peptides and unfolded proteins. J Mol Biol 245:251-260.
    • (1995) J Mol Biol , vol.245 , pp. 251-260
    • Kemmink, J.1    Creighton, T.2
  • 35
    • 0025345415 scopus 로고
    • Intermediates in the folding reaction of small proteins
    • Kim PS, Baldwin RL. 1990. Intermediates in the folding reaction of small proteins. Annu Rev Biochem 59:631-660.
    • (1990) Annu Rev Biochem , vol.59 , pp. 631-660
    • Kim, P.S.1    Baldwin, R.L.2
  • 36
    • 45249128810 scopus 로고
    • Measurement of vicinal couplings from cross peaks in COSY spectra
    • Kim Y, Prestegard JH. 1989. Measurement of vicinal couplings from cross peaks in COSY spectra. J Mag Reson 84:9-13.
    • (1989) J Mag Reson , vol.84 , pp. 9-13
    • Kim, Y.1    Prestegard, J.H.2
  • 37
    • 0019327003 scopus 로고
    • A two-dimensional nuclear Overhauser enhancement (2D NOE) for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules
    • Kumar A, Ernst RR, Wuthrich K. 1980. A two-dimensional nuclear Overhauser enhancement (2D NOE) for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules. Biophys Biochem Res Commun 95:1-6.
    • (1980) Biophys Biochem Res Commun , vol.95 , pp. 1-6
    • Kumar, A.1    Ernst, R.R.2    Wuthrich, K.3
  • 38
    • 0002498995 scopus 로고
    • Computer-aided interpretation of analytical sedimentation data for proteins
    • Harding SE, Rowe AJ, Horton JC, eds. Cambridge, UK: Royal Society of Chemistry
    • Laue TM, Shah BD, Ridgeway TM, Pelletier SL. 1992. Computer-aided interpretation of analytical sedimentation data for proteins. In: Harding SE, Rowe AJ, Horton JC, eds. Analytical ultracentrifugation in biochemistry and polymer sciences. Cambridge, UK: Royal Society of Chemistry. pp 90-125.
    • (1992) Analytical Ultracentrifugation in Biochemistry and Polymer Sciences , pp. 90-125
    • Laue, T.M.1    Shah, B.D.2    Ridgeway, T.M.3    Pelletier, S.L.4
  • 39
    • 0025300073 scopus 로고
    • Peptide α-helicity in aqueous TFE: Correlation with predicted α-helicity and the secondary structure of the corresponding regions of bovine growth hormone
    • Lehrman SR, Tuls JL, Lund M. 1990. Peptide α-helicity in aqueous TFE: Correlation with predicted α-helicity and the secondary structure of the corresponding regions of bovine growth hormone. Biochemistry 29:5590-5596.
    • (1990) Biochemistry , vol.29 , pp. 5590-5596
    • Lehrman, S.R.1    Tuls, J.L.2    Lund, M.3
  • 40
    • 0028351177 scopus 로고
    • Formation of a hydrophobic cluster in denatured bovine pancreatic trypsin inhibitor
    • Lumb KJ, Kim PS. 1994. Formation of a hydrophobic cluster in denatured bovine pancreatic trypsin inhibitor. J Mol Biol 236:412-420.
    • (1994) J Mol Biol , vol.236 , pp. 412-420
    • Lumb, K.J.1    Kim, P.S.2
  • 41
    • 0027391780 scopus 로고
    • Capping interactions in isolated α-helices: Position-dependent substitution effects and structure of a serine-capped peptide helix
    • Lyu PC, Wemmer DE, Zhou HX, Pinker RJ, Kallenbach NR. 1993. Capping interactions in isolated α-helices: Position-dependent substitution effects and structure of a serine-capped peptide helix. Biochemistry 32:421-425.
    • (1993) Biochemistry , vol.32 , pp. 421-425
    • Lyu, P.C.1    Wemmer, D.E.2    Zhou, H.X.3    Pinker, R.J.4    Kallenbach, N.R.5
  • 42
    • 85023294180 scopus 로고
    • Position-dependent stabilizing effects in α-helices: N-terminal capping in synthetic model peptides
    • Lyu PC, Zhou HX, Jelveh N, Wemmer DE, Kallenbach NR. 1992. Position-dependent stabilizing effects in α-helices: N-terminal capping in synthetic model peptides. J Am Chem Soc 114:6560-6562.
    • (1992) J Am Chem Soc , vol.114 , pp. 6560-6562
    • Lyu, P.C.1    Zhou, H.X.2    Jelveh, N.3    Wemmer, D.E.4    Kallenbach, N.R.5
  • 43
    • 0021114895 scopus 로고
    • Application of phase-sensitive two-dimensional correlated spectroscopy (COSY) for measurement of proton-proton spin-spin coupling constants
    • Marion D, Wüthrich K. 1983. Application of phase-sensitive two-dimensional correlated spectroscopy (COSY) for measurement of proton-proton spin-spin coupling constants. Biochem Biophys Res Commun 113:967-974.
    • (1983) Biochem Biophys Res Commun , vol.113 , pp. 967-974
    • Marion, D.1    Wüthrich, K.2
  • 44
    • 0028574137 scopus 로고
    • Contributions of a hydrogen bond/salt-bridge network to the stability of secondary and tertiary structure in λ repressor
    • Marqusee S, Sauer RT. 1994. Contributions of a hydrogen bond/salt-bridge network to the stability of secondary and tertiary structure in λ repressor. Protein Sci 3:2217-2225.
    • (1994) Protein Sci , vol.3 , pp. 2217-2225
    • Marqusee, S.1    Sauer, R.T.2
  • 45
    • 0029207339 scopus 로고
    • 1H NMR chemical shifts obtained as a function of temperature and trifluoro-ethanol concentration for the peptide series GGXGG
    • 1H NMR chemical shifts obtained as a function of temperature and trifluoro-ethanol concentration for the peptide series GGXGG. J Biomol NMR 5:14-24.
    • (1995) J Biomol NMR , vol.5 , pp. 14-24
    • Merutka, G.1    Morikis, D.2    Brüschweiler, R.3    Wright, P.E.4
  • 46
    • 0024961628 scopus 로고
    • Structure of the amino-terminal domain of the phage 434 repressor at 2.00 Å resolution
    • Mondragon A, Subbiah S, Almo SC, Drottar M, Harrison SC. 1989a. Structure of the amino-terminal domain of the phage 434 repressor at 2.00 Å resolution. J Mol Biol 205:189-200.
    • (1989) J Mol Biol , vol.205 , pp. 189-200
    • Mondragon, A.1    Subbiah, S.2    Almo, S.C.3    Drottar, M.4    Harrison, S.C.5
  • 47
    • 0024961623 scopus 로고
    • Structure of phage 434 Cro protein at 2.35 Å resolution
    • Mondragon A, Wolberger C, Harrison SC. 1989b. Structure of phage 434 Cro protein at 2.35 Å resolution. J Mol Biol 205:179-188.
    • (1989) J Mol Biol , vol.205 , pp. 179-188
    • Mondragon, A.1    Wolberger, C.2    Harrison, S.C.3
  • 48
    • 0029009067 scopus 로고
    • The hydrophobic-staple motif and a role for loop-residues in α-helix stability and folding
    • Muñoz V, Blanco FJ, Serrano L. 1995a. The hydrophobic-staple motif and a role for loop-residues in α-helix stability and folding. Nature Struct Biol 2:380-385.
    • (1995) Nature Struct Biol , vol.2 , pp. 380-385
    • Muñoz, V.1    Blanco, F.J.2    Serrano, L.3
  • 49
    • 0002682169 scopus 로고    scopus 로고
    • Local and nonlocal interactions in protein folding and stability - An experimentalist's point of view
    • Muñoz V, Serrano L. 1996. Local and nonlocal interactions in protein folding and stability - An experimentalist's point of view. Folding Design 1:R71-R77.
    • (1996) Folding Design , vol.1
    • Muñoz, V.1    Serrano, L.2
  • 50
    • 0031127043 scopus 로고    scopus 로고
    • Development of the multiple sequence approximation within the AGADIR model of α-helix formation: Comparison with Zimm-Bragg and Lifson-Roig formalisms
    • Muñoz V, Serrano L. 1997. Development of the multiple sequence approximation within the AGADIR model of α-helix formation: Comparison with Zimm-Bragg and Lifson-Roig formalisms. Biopolymers 41:495-509.
    • (1997) Biopolymers , vol.41 , pp. 495-509
    • Muñoz, V.1    Serrano, L.2
  • 51
    • 0028943608 scopus 로고
    • Structural analysis of peptides encompassing all α-helices of three α/β parallel proteins: Che-Y, flavodoxin, p21-ras: Implications for α-helix stability and the folding of α/β parallel proteins
    • Muñoz V, Serrano L, Jimenéz MA, Rico M. 1995b. Structural analysis of peptides encompassing all α-helices of three α/β parallel proteins: Che-Y, flavodoxin, p21-ras: Implications for α-helix stability and the folding of α/β parallel proteins. J Mol Biol 247:648-669.
    • (1995) J Mol Biol , vol.247 , pp. 648-669
    • Muñoz, V.1    Serrano, L.2    Jimenéz, M.A.3    Rico, M.4
  • 52
    • 0031889226 scopus 로고    scopus 로고
    • Trifluoroethanol effects on helix propensity and electrostatic interactions in the helical peptide from ribonuclease T1
    • Myers JK, Pace CN, Scholtz JM. 1998. Trifluoroethanol effects on helix propensity and electrostatic interactions in the helical peptide from ribonuclease T1. Protein Sci 7:383-388.
    • (1998) Protein Sci , vol.7 , pp. 383-388
    • Myers, J.K.1    Pace, C.N.2    Scholtz, J.M.3
  • 53
    • 0021766648 scopus 로고
    • Effects of urea and guanidine hydrochloride on peptide and nonpolar groups
    • Nandi PK, Robinson DR. 1984. Effects of urea and guanidine hydrochloride on peptide and nonpolar groups. Biochemistry 23:6661-6668.
    • (1984) Biochemistry , vol.23 , pp. 6661-6668
    • Nandi, P.K.1    Robinson, D.R.2
  • 54
    • 0022804939 scopus 로고
    • Stabilization of the ribonuclease S-peptide in trifluoroethanol solutions
    • Nelson JW, Kallenbach N. 1986. Stabilization of the ribonuclease S-peptide in trifluoroethanol solutions. Proteins Struct Funct Genet 1:211-217.
    • (1986) Proteins Struct Funct Genet , vol.1 , pp. 211-217
    • Nelson, J.W.1    Kallenbach, N.2
  • 55
    • 0024473893 scopus 로고
    • Persistence of the alpha-helix stop signal in S-peptide in TFE solutions
    • Nelson JW, Kallenbach N. 1989. Persistence of the alpha-helix stop signal in S-peptide in TFE solutions. Biochemistry 28:5256-5261.
    • (1989) Biochemistry , vol.28 , pp. 5256-5261
    • Nelson, J.W.1    Kallenbach, N.2
  • 56
    • 0014213849 scopus 로고
    • A second right-handed helical structure with the parameters of the Pauling-Corey α-helix
    • Némethy G, Phillips DC, Leach SJ, Scheraga HA. 1967. A second right-handed helical structure with the parameters of the Pauling-Corey α-helix. Nature 214:363-365.
    • (1967) Nature , vol.214 , pp. 363-365
    • Némethy, G.1    Phillips, D.C.2    Leach, S.J.3    Scheraga, H.A.4
  • 57
    • 0026672305 scopus 로고
    • NMR determination of residual structure in a urea-denatured protein
    • Neri D, Billeter M, Wider G, Wüthrich K. 1992. NMR determination of residual structure in a urea-denatured protein. Science 257:1559-1563.
    • (1992) Science , vol.257 , pp. 1559-1563
    • Neri, D.1    Billeter, M.2    Wider, G.3    Wüthrich, K.4
  • 58
    • 0027968834 scopus 로고
    • Helix-stabilizing interactions between tyrosine and leucine or valine when the spacing is (i, i + 4)
    • Padmanabhan S, Baldwin RL. 1994a. Helix-stabilizing interactions between tyrosine and leucine or valine when the spacing is (i, i + 4). J Mol Biol 241:706-713.
    • (1994) J Mol Biol , vol.241 , pp. 706-713
    • Padmanabhan, S.1    Baldwin, R.L.2
  • 59
    • 0028569692 scopus 로고
    • Tests for helix-stabilizing interactions between various nonpolar amino in alanine-based peptides
    • Padmanabhan S, Baldwin RL. 1994b. Tests for helix-stabilizing interactions between various nonpolar amino in alanine-based peptides. Protein Sci 3:1992-1997.
    • (1994) Protein Sci , vol.3 , pp. 1992-1997
    • Padmanabhan, S.1    Baldwin, R.L.2
  • 62
    • 0032502839 scopus 로고    scopus 로고
    • Contact order, transition state placement and the refolding rates of single domain proteins
    • Plaxco KW, Simons KT, Baker D. 1998. Contact order, transition state placement and the refolding rates of single domain proteins. J Mol Biol 277:985-994.
    • (1998) J Mol Biol , vol.277 , pp. 985-994
    • Plaxco, K.W.1    Simons, K.T.2    Baker, D.3
  • 63
    • 0024290488 scopus 로고
    • Helix signals in proteins
    • Presta LG, Rose GD. 1988. Helix signals in proteins. Science 240:1648-1652.
    • (1988) Science , vol.240 , pp. 1648-1652
    • Presta, L.G.1    Rose, G.D.2
  • 64
    • 0030691777 scopus 로고    scopus 로고
    • C-capping and helix stability: The Pro C-capping motif
    • Prieto J, Serrano L. 1997. C-capping and helix stability: The Pro C-capping motif. J Mol Biol 274:276-288.
    • (1997) J Mol Biol , vol.274 , pp. 276-288
    • Prieto, J.1    Serrano, L.2
  • 68
    • 0024290472 scopus 로고
    • Amino acid preferences for specific locations at the ends of helices
    • Richardson JS, Richardson DC. 1988. Amino acid preferences for specific locations at the ends of helices. Science 240:1648-1652.
    • (1988) Science , vol.240 , pp. 1648-1652
    • Richardson, J.S.1    Richardson, D.C.2
  • 69
    • 0028597020 scopus 로고
    • NMR solution structure of the C-terminal fragment 255-316 of thermolysin: A dimer formed by subunits having the native structure
    • Rico M, Jiménez MA, González C, De Fillippis V, Fontana A. 1994. NMR solution structure of the C-terminal fragment 255-316 of thermolysin: A dimer formed by subunits having the native structure. Biochemistry 33:14834-14847.
    • (1994) Biochemistry , vol.33 , pp. 14834-14847
    • Rico, M.1    Jiménez, M.A.2    González, C.3    De Fillippis, V.4    Fontana, A.5
  • 70
    • 0027180807 scopus 로고
    • Conformational behavior of Escherichia coli OmpA signal peptides in membrane mimetic environments
    • Rizo J, Blanco FJ, Kobe B, Bruch MD, Gierasch LM. 1993. Conformational behavior of Escherichia coli OmpA signal peptides in membrane mimetic environments. Biochemistry 32:4881-4894.
    • (1993) Biochemistry , vol.32 , pp. 4881-4894
    • Rizo, J.1    Blanco, F.J.2    Kobe, B.3    Bruch, M.D.4    Gierasch, L.M.5
  • 71
    • 0030447864 scopus 로고    scopus 로고
    • Helix propagation and N-cap propensities of the amino acids measured in alanine-based peptides in 40 volume percent trifluorethanol
    • Rohl CA. Chakrabartty A, Baldwin RL. 1996. Helix propagation and N-cap propensities of the amino acids measured in alanine-based peptides in 40 volume percent trifluorethanol. Protein Sci 5:2623-2637.
    • (1996) Protein Sci , vol.5 , pp. 2623-2637
    • Rohl, C.A.1    Chakrabartty, A.2    Baldwin, R.L.3
  • 72
    • 0026524198 scopus 로고
    • An N-terminal fragment of barnase has residual structure similar to that in a refolding intermediate
    • Sancho J, Neira JL, Fersht A. 1992. An N-terminal fragment of barnase has residual structure similar to that in a refolding intermediate. J Mol Biol 224:749-758.
    • (1992) J Mol Biol , vol.224 , pp. 749-758
    • Sancho, J.1    Neira, J.L.2    Fersht, A.3
  • 74
    • 0027497118 scopus 로고
    • The energetics of ion-pair and hydrogen bonding interactions in a helical peptide
    • Scholtz JM, Qian H, Robbins VH, Baldwin RL. 1993. The energetics of ion-pair and hydrogen bonding interactions in a helical peptide. Biochemistry 32:9668-9676.
    • (1993) Biochemistry , vol.32 , pp. 9668-9676
    • Scholtz, J.M.1    Qian, H.2    Robbins, V.H.3    Baldwin, R.L.4
  • 75
    • 0026143167 scopus 로고
    • Local structures in unfolded lysozyme and correlation with secondary structures in the native conformation: Helix forming or breaking propensity of peptide segments
    • Segawa SI, Fukuno T, Fujiwara K, Noda Y. 1991. Local structures in unfolded lysozyme and correlation with secondary structures in the native conformation: Helix forming or breaking propensity of peptide segments. Biopolymers 31:457-509.
    • (1991) Biopolymers , vol.31 , pp. 457-509
    • Segawa, S.I.1    Fukuno, T.2    Fujiwara, K.3    Noda, Y.4
  • 76
    • 0029978353 scopus 로고    scopus 로고
    • Analysis of main chain torsion angles in proteins: Prediction of NMR coupling constants for native and random coil conformations
    • Smith LJ, Bolin KA, Schwalbe H, MacArthur MW, Thornton JM, Dobson CM. 1996. Analysis of main chain torsion angles in proteins: Prediction of NMR coupling constants for native and random coil conformations. J Mol Biol 255:494-506.
    • (1996) J Mol Biol , vol.255 , pp. 494-506
    • Smith, L.J.1    Bolin, K.A.2    Schwalbe, H.3    MacArthur, M.W.4    Thornton, J.M.5    Dobson, C.M.6
  • 77
    • 0026726004 scopus 로고
    • Effect of trifluoroethanol on protein secondary structure: An NMR and CD study using a synthetic actin peptide
    • Sonnichsen FD, Van Eyk JE, Hodges RS, Sykes BD. 1992. Effect of trifluoroethanol on protein secondary structure: An NMR and CD study using a synthetic actin peptide. Biochemistry 31:8790-8798.
    • (1992) Biochemistry , vol.31 , pp. 8790-8798
    • Sonnichsen, F.D.1    Van Eyk, J.E.2    Hodges, R.S.3    Sykes, B.D.4
  • 78
    • 0032548905 scopus 로고    scopus 로고
    • Cooperative folding of a protein mini domain: The peripheral subunit-binding domain of the pyruvate dehydrogenase multienzyme complex
    • Spector S, Kuhlman B, Fairman R, Wong E, Boice JA, Raleigh DR. 1998. Cooperative folding of a protein mini domain: The peripheral subunit-binding domain of the pyruvate dehydrogenase multienzyme complex. J Mol Biol 276:479-489.
    • (1998) J Mol Biol , vol.276 , pp. 479-489
    • Spector, S.1    Kuhlman, B.2    Fairman, R.3    Wong, E.4    Boice, J.A.5    Raleigh, D.R.6
  • 79
    • 0028822255 scopus 로고
    • Addition of side chain interactions to the modified Lifson-Roig helix-coil transition theory: Application to energetics of Phe-Met interactions
    • Stapely BJ, Rohl CA, Doig AD. 1995. Addition of side chain interactions to the modified Lifson-Roig helix-coil transition theory: Application to energetics of Phe-Met interactions. Protein Sci 4:2383-2391.
    • (1995) Protein Sci , vol.4 , pp. 2383-2391
    • Stapely, B.J.1    Rohl, C.A.2    Doig, A.D.3
  • 80
    • 0002584387 scopus 로고
    • A convenient and accurate method for the measurements of the values of spin-spin coupling constants
    • Stonehouse J, Keeler J. 1995. A convenient and accurate method for the measurements of the values of spin-spin coupling constants. J Magn Reson 112 (Series A):43-57.
    • (1995) J Magn Reson 112 (Series A) , vol.112 , pp. 43-57
    • Stonehouse, J.1    Keeler, J.2
  • 81
    • 0030789351 scopus 로고    scopus 로고
    • Laser temperature jump study of the helix coil kinetics of an alanine peptide interpreted with a "kinetic zipper" model
    • Thompson PA, Eaton WA, Hoftrichter J. 1997. Laser temperature jump study of the helix coil kinetics of an alanine peptide interpreted with a "kinetic zipper" model. Biochemistry 36:9200-9210.
    • (1997) Biochemistry , vol.36 , pp. 9200-9210
    • Thompson, P.A.1    Eaton, W.A.2    Hoftrichter, J.3
  • 82
    • 0029034436 scopus 로고
    • Side-chain interactions between sulfur-containing amino acids and Phe in α-helices
    • Viguera AR, Serrano L. 1995. Side-chain interactions between sulfur-containing amino acids and Phe in α-helices. Biochemistry 34:8771-8779.
    • (1995) Biochemistry , vol.34 , pp. 8771-8779
    • Viguera, A.R.1    Serrano, L.2
  • 83
    • 0030623698 scopus 로고    scopus 로고
    • Favorable native-like local interactions can accelerate protein folding
    • Viguera AR, Villegas V, Avilés FX, Serrano L. 1996. Favorable native-like local interactions can accelerate protein folding. Folding Design 2:23-33.
    • (1996) Folding Design , vol.2 , pp. 23-33
    • Viguera, A.R.1    Villegas, V.2    Avilés, F.X.3    Serrano, L.4
  • 84
    • 0030334742 scopus 로고    scopus 로고
    • Stabilization of proteins by rational design of α-helix stability using helix/coil transition theory
    • Villegas V, Viguera AR, Avilés FX, Serrano L. 1996. Stabilization of proteins by rational design of α-helix stability using helix/coil transition theory. Folding Design 1:29-34.
    • (1996) Folding Design , vol.1 , pp. 29-34
    • Villegas, V.1    Viguera, A.R.2    Avilés, F.X.3    Serrano, L.4
  • 86
    • 0029181728 scopus 로고
    • 15N random coil NMR chemical shifts of the common amino acids. I. Investigation of nearest-neighbor effects
    • 15N random coil NMR chemical shifts of the common amino acids. I. Investigation of nearest-neighbor effects. J Biomol NMR 5:67-81.
    • (1995) J Biomol NMR , vol.5 , pp. 67-81
    • Wishart, D.S.1    Bigam, C.G.2    Holm, A.3    Hodges, R.S.4    Sykes, B.D.5
  • 87
    • 0026410969 scopus 로고
    • Relationship between nuclear magnetic resonance chemical shift and protein secondary structure
    • Wishart DS, Sykes BD, Richards FM. 1991. Relationship between nuclear magnetic resonance chemical shift and protein secondary structure. J Mol Biol 222:311-333.
    • (1991) J Mol Biol , vol.222 , pp. 311-333
    • Wishart, D.S.1    Sykes, B.D.2    Richards, F.M.3
  • 88
    • 0026597879 scopus 로고
    • The chemical shift index and protein secondary structure
    • Wishart DS, Sykes BD, Richards FM. 1992. The chemical shift index and protein secondary structure. Biochemistry 31:1647-1651.
    • (1992) Biochemistry , vol.31 , pp. 1647-1651
    • Wishart, D.S.1    Sykes, B.D.2    Richards, F.M.3


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