Mapping the effects of metal ion reduction and substrate analog binding to Fe-superoxide dismutase by NMR spectroscopy

Magnetic Resonance in Chemistry

Volumn 38, Issue 7, 2000, Pages 536-542

  Vathyam, Surekha ^a   Byrd, R Andrew ^b   Miller, Anne Frances ^a,c  

^a JOHNS HOPKINS UNIVERSITY   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

^c UNIVERSITY OF KENTUCKY   (United States)

Author keywords

NMR; Non heme iron; Paramagnetic; Redox linked changes; Substrate binding; Superoxide dismutase

Indexed keywords

CATALYST ACTIVITY; CHEMICAL SHIFT; DIMERS; IRON COMPOUNDS; METAL IONS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; OXIDATION; PARAMAGNETISM; QUANTUM THEORY;

HEME IRON; NMR-SPECTROSCOPY; NON-HEME IRON; OXIDIZED STATE; PARAMAGNETIC; REDOX-LINKED CHANGE; REDUCED-STATE; SUBSTRATE-BINDING; SUPER OXIDE DISMUTASE; SUPEROXIDE DISMUTASES;

SUPEROXIDE DISMUTASE;

EID: 0034216330     PISSN: 07491581     EISSN: None     Source Type: Journal    
DOI: 10.1002/1097-458X(200007)38:7<536::AID-MRC719>3.0.CO;2-8     Document Type: Article

References (59)

1. 1. Fridovich I. J. Biol. Chem. 1997; 272: 18515.
2. 2. Miller A-F, Sorkin DL. Comments Mol. Cell. Biophys. 1997; 9: 1.
3. 3. Bull C, Fee JA. J. Am. Chem. Soc. 1985; 107: 3295.
4. 4. Lavelle F. McAdam ME, Fielden EM, Roberts PB, Puget K, Michelson AM. Biochem. J. 1977; 161: 3.
5. 5. Lah MS, Dixon MM, Pattridge KA, Stallings WC, Fee JA, Ludwig ML. Biochemistry 1995; 34: 1646.
6. 6. Sines J, Allison S, Wierzbicki A, McCammon JA. J. Phys. Chem. 1990; 94: 959.
7. 7. Whittaker JW, Solomon EI. J. Am. Chem. Soc. 1988; 110: 5329.
8. 8. Sorkin DL. Spectroscopic studies of Ionization and Anion Binding Events in the Active Sites of Iron(II) and Iron(III) Superoxide Dismutase from Escherichia Coli. PhD thesis, The Johns Hopkins University: Baltimore, MD, 1999.
9. 9. Argese E, Orsega EF, Granito C, Moretto LM. Bioelectrochem. Bioenerg. 1995; 38: 397.
10. 10. Vathyam S, Byrd RA, Miller A-F. J. Biomol. NMR 1999; 14: 293.
11. 11. McCallum SA, Hitchens TK, Rule GS. J. Magn. Reson. 1998; 134: 350.
12. 12. Caffrey M, Cai M, Kaufman J, Stahl SJ, Wingfield PT, Covell DG, Gronenborn AM, Clore GM. EMBO J. 1998; 17: 4572.
13. 13. Garrett DS. Seok T-J. Peterofsky A, Gronenborn AM, Clore GM. Nature Struct. Biol. 1999; 6: 166.
14. 14. Gardner KH, Zhang X, Gehring K, Kay LE. J. Am. Chem. Soc. 1998; 120: 11738.
15. 15. Shan X, Gardner KH, Muhandiram DR, Rao NS, Arrowsmith CH, Kay LE. J. Am. Chem. Soc. 1996; 118: 6570.
16. 16. Stallings WC, Powers TB, Pattridge KA, Fee JA, Ludwig ML. Proc. Natl. Acad. Sci. USA 1983; 80: 3884.
17. 17. Maroney MJ, Kurtz DM Jr, Nocek JM, Pearce LL, Que L Jr. J. Am. Chem. Soc. 1986; 108: 6871.
18. 18. Ming L-J, Lynch JB, Holz RC, Que L Jr. Inorg. Chem. 1994; 33: 83.
19. 19. Dugad LB, La Mar GN, Banci L, Bertini I. Biochemistry 1990; 29: 2263.
20. 20. Banci L, Bencini A, Bertini I, Luchinat C, Piccioli M. Inorg. Chem. 1990; 29: 4867.
21. 21. Yu LP, Smith GM. Biochemistry 1990; 29: 2914.
22. 22. Qi PX, Beckman RA, Wand AJ. Biochemistry 1996; 35: 12275.
23. 23. Kolczak U, Han C, Sylvia LA, La Mar GN. J. Am. Chem. Soc. 1997; 119: 12643.
24. 24. Volkman BF, Wilkens SJ, Lee AL, Xia B, Westler WM, Berger R, Markley JL. J. Am. Chem. Soc. 1999; 121: 4677.
25. 25. Lyons TA, Ratnaswamy G, Pochapsky TC. Protein Sci. 1996; 5: 627.
26. 26. Jain NU, Pochapsky TC. J. Am. Chem. Soc. 1998; 120: 12984.
27. 27. Gooley PR, Zhao D, MacKenzie NE. J. Biomol. NMR 1991; 1: 145.
28. 28. Dangi B, Blankman JI, Miller CJ, Volkman BF, Guiles RD. J. Phys. Chem. B 1998; 102: 8201.
29. 29. Arnesano F, Banci L, Bertini I, Felli IC, Koulougliotis D. Eur. J. Blochem. 1999; 260: 347.
30. 30. Fetrow JS, Baxter SM. Biochemistry 1999; 38: 4480.
31. 31. Peters JW, Stowell MHB, Soltis SM, Finnegan MG, Johnson MK, Rees DC. Biochemistry 1997; 36: 1181.
32. 32. Schindelin H, Kisker C, Hilton J, Rajagopalan KV, Rees DC. Science 1996; 272: 1615.
33. 33. Davydov A, Davydov R, Graslund A, Lipscomb JD, Andersson KK. J. Biol. Chem. 1997; 272: 7022.
34. 34. Sorkin DL, Miller A-F. Biochemistry 1997; 36: 4916.
35. 35. Slykhouse TO, Fee JA. J. Biol. Chem. 1976; 251: 5472.
36. 36. McCord JM, Fridovich I. J. Biol. Chem. 1969; 244: 6049.
37. 37. Yamazaki T, Lee W, Arrowsmith CH, Muhandiram DR, Kay LE. J. Am. Chem. Soc. 1994; 116: 11655.
38. 38. Yamazaki T, Lee W, Revington M, Mattiello DL, Dahlquist FW, Arrowsmith CH, Kay LE. J. Am. Chem. Soc. 1994; 116: 6464.
39. 39. Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A. J. Biomol. NMR 1995; 6: 277.
40. 40. Kraulis P, Domaille PJ, Campbell-Burk SL, Van Aken T, Laue ED. Biochemistry 1994; 33: 3515.
41. 41. Wishart DS, Bigam CG, Yao J, Abildgaard F, Dyson HJ, Oldfield E, Markley JL, Sykes BD. J. Biomol. NMR 1995; 6: 135.
42. 42. Guan Y, Hickey MJ, Borgstahl GEO, Hallewell RA, Lepock JR, O'Connor D, Hsieh Y, Nick HS, Silverman DN, Tainer JA. Biochemistry 1998; 37: 4722.
43. 43. Hunter T, Ikebukuro K, Bannister WH, Bannister JV, Hunter GJ. Biochemistry 1997; 36: 4925.
44. 44. Schwartz AL, Yikilmaz E, Vance CK, Vathyam S, Miller A-F. J. Inorg. Biochem. in press.
45. 45. Bertini L, Luchinat C. NMR of Paramagnetic Molecules in Biological Systems. Benjamin/Cummings: New York, 1986.
46. 46. LaMar GN, Horrocks WD Jr, Holm RH. NMR of Paramagnetic Molecules. Academic Press: New York, 1973.
47. 47. Wishart DS, Sykes BD, Richards FM. J. Mol. Biol. 1991; 222: 311.
48. 48. Spera S, Bax A. J. Am. Chem. Soc. 1991; 113: 5490.
49. 49. DeDios AC, Oldfield E. J. Am. Chem. Soc. 1994; 116: 11485.
50. 50. Sorkin DL, Duong DK, Miller A-F. Biochemistry 1997; 36: 8202.
51. 51. Stallings WC, Metzger AL, Pattridge KA, Fee JA, Ludwig ML. Free Rad. Res. Commun. 1991; 12-13: 259.
52. 52. Tierney DL, Fee JA, Ludwig ML, Penner-Hahn JE. Biochemistry 1995; 34: 1661.
53. 53. Fee JA, McClune GJ, Lees AC, Zidovetzki R, Pecht I. Isr. J. Chem. 1981; 21: 54.
54. 54. Fee JA, Yoshida T, Bull C, O'Neill P, Fielden EM. In Superoxide and Superoxide Dismutases in Chemistry, Biology and Medicine, Rotilio G (ed). Elsevier: New York, 1986.
55. 55. Stoddard BL, Howell PL, Ringe D, Petsko GA. Biochemistry 1990; 29: 8885.
56. 56. Blanchard L, Blackledge MJ, Marion D, Guerlesquin F. FEBS Lett. 1996; 389: 203.
57. 57. Bertini Î, Dikiy A, Kastrau DHW, Luchinat C, Sompornpisut P. Biochemistry 1995; 34: 9851.
58. 58. Miller AF. In Handbook of Metalloproteins, Weighardt K, Huber R, Poulos TL, Messerschmidt A (eds). Wiley, in press.
59. 59. Que L Jr, Ho RYN. Chem. Rev. 1996; 96: 2607.