메뉴 건너뛰기




Volumn 10, Issue 11, 1999, Pages 1188-1211

A database of 660 peptide ion cross sections: use of intrinsic size parameters for bona fide predictions of cross sections

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; PEPTIDE; PROTEIN;

EID: 0033473749     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1044-0305(99)00079-3     Document Type: Article
Times cited : (186)

References (45)
  • 2
    • 0009090245 scopus 로고    scopus 로고
    • For discussions of ion traps see, for example: Paul, W.; Steinwedel, H. U.S. Patent 2939952, 1960. March, R.; Huges, R. Quadrupole Storage Mass Spectrometry; Wiley: New York, 1989. Cooks, R. G.; Kaiser, R. E., Jr. Acc. Chem. Res. 1990, 23, 213. Glish, G. L.; McLuckey, S. A. Int. J. Mass Spectrom. Ion Processes 1991, 106, 1. March, R. E. J. Mass Spectrom. 1997, 32, 351.
  • 4
    • 0009167124 scopus 로고    scopus 로고
    • For reviews of ion mobility studies see: (a) Hagen, D. F. Anal. Chem. 1979, 51, 870. (b) St. Louis, R. H.; Hill, H. H. Crit. Rev. Anal. Chem. 1990, 21, 321. (c) von Helden, G.; Hsu, M. T.; Bowers, M. T. J. Chem. Phys. 1991, 93, 3835. (d) Jarrold, M. F. J. Phys. Chem. 1995. (e) Clemmer, D. E.; Jarrold, M. F. J. Mass Spectrom. 1997, 32, 577. (f) Liu, Y.; Valentine, S. J.; Counterman, A. E.; Hoaglund, C. S.; Clemmer, D. E. Anal. Chem. 1997, 69, 728A.
  • 8
    • 0009089118 scopus 로고    scopus 로고
    • The term 'collision cross section,' as determined by ion mobility techniques, is strictly a measure of a collision integral which depends on the dynamics of momentum transfer for all ion-buffer gas collisions.
  • 15
    • 0009247624 scopus 로고    scopus 로고
    • Leon, S. J. Linear Algebra with Applications, 3rd ed.; Macmillan: New York, 1990, pp 208-211.
  • 18
    • 0009089119 scopus 로고    scopus 로고
    • Winter, B. E.; Light-Wahl, K. J.; Rockwood, A. L.; Smith, R. D. J. Am. Chem. Soc. 1992, 114, 5897. Suckau, D.; Shi, Y.; Beu, S. C.; Senko, M. W.; Quinn, J. P.; Wampler, F. M.; McLafferty, F. W. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 790. Campbell, S.; Rodgers, M. T.; Marzluff, E. M.; Beauchamp, J. L. J. Am. Chem. Soc. 1994, 116, 9765. Campbell, S.; Rodgers, M. T.; Marzluff, E. M.; Beauchamp, J. L. J. Am. Chem. Soc. 1995, 117, 12840. Wood, T. D.; Chorush, R. A.; Wampler, F. M.; Little, D. P.; O'Connor, P. B.; McLafferty, F. W. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 2451. Cassady, C. J.; Carr, S. R. J. Mass Spectrom. 1996, 93, 3143. McLafferty, F. W.; Guan, Z.; Haupts, U.; Wood, T. D.; Kelleher, N. L. J. Am. Chem. Soc. 1998, 120, 4732. Freitas, M. A.; Hendrickson, C. L.; Emmett, M. R.; Marshall, A. G. J. Am. Soc. Mass Spectrom. 1998, 9, 1012. Freitas, M. A.; Marshall, A. G. Int. J. Mass Spectrom. Ion Processes 1999, 185/186/187, 565.
  • 19
    • 0009089120 scopus 로고    scopus 로고
    • Williams, E. R. J. Mass Spectrom. 1996, 31, 831. Green, M. K.; Lebrilla, C. B. Mass Spectrom. Rev. 1997, 16, 53. Harrison, A. G. Mass Spectrom. Rev. 1997, 16, 201.
  • 20
    • 0009245375 scopus 로고    scopus 로고
    • Klaasen, J. S.; Blades, A. T.; Kebarle, P. J. Phys. Chem. 1995, 99, 15509. Stephenson, J. L., Jr.; McLuckey, S. A. J. Am. Chem. Soc. 1996, 118, 7390. Stephenson, J. L., Jr.; McLuckey, S. A. Anal. Chem. 1996, 68, 4026. Rodriguez-Cruz, S. E.; Klassen, J. S.; Williams, E. R. J. Am. Soc. Mass Spectrom. 1997, 8, 565. Woenckhaus, J.; Mao, Y.; Jarrold, M. F. J. Phys. Chem. B 1997, 101, 847. Woenckhaus, J.; Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1997, 119, 9586. Fye, J. L.; Woenckhaus, J.; Jarrold, M. F. J. Am. Chem. Soc. 1998, 120, 1327. Lee, S.; Freivogel, P.; Schindler, T.; Beauchamp, J. L. J. Am. Chem. Soc. 1998, 120, 11758.
  • 21
    • 0009165389 scopus 로고    scopus 로고
    • Kaltashov, I. A.; Fenselau, C. C. J. Am. Chem. Soc. 1995, 117, 9906. Adams, J.; Strobel, F.; Reiter, A. J. Am. Soc. Mass Spectrom. 1996, 7, 30. Kaltashov, I. A.; Fenselau, C. C. Proteins 1997, 27, 165.
  • 22
    • 0009091715 scopus 로고    scopus 로고
    • Sullivan, P. A.; Axelsson, J.; Altmann, S.; Quist, A. P.; Sunqvist, B. U. R.; Reimann, C. T. J. Am. Soc. Mass Spectrom. 1996, 7, 329. Reimann, C. T.; Sullivan, P. A.; Axelsson, J.; Quist, A. P.; Altmann, S.; Roepstorff, P.; Velazquez, I.; Tapia, O. J. Am. Chem. Soc. 1998, 120, 7608.
  • 23
    • 0009164475 scopus 로고    scopus 로고
    • Covey, T. R.; Douglas, D. J. J. Am. Soc. Mass Spectrom. 1993, 4, 616. Collings, B. A.; Douglas, D. J. J. Am. Chem. Soc. 1996, 118, 4488.
  • 25
    • 0009164194 scopus 로고    scopus 로고
    • Clemmer, D. E.; Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1995, 117, 10141. Shelimov, K. B.; Jarrold, M. F. J. Am. Chem. Soc. 1996, 118, 10313. Shelimov, K. B.; Clemmer, D. E.; Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1997, 119, 2240. Shelimov, K. B.; Jarrold, M. F. J. Am. Chem. Soc. 1997, 119, 2987. Shelimov, K. B.; Jarrold, M. F. J. Am. Chem. Soc. 1997, 119, 9586.
  • 30
    • 0009089663 scopus 로고    scopus 로고
    • See, for example: Martyna, G. J. J. Chem. Phys. 1996, 104, 2018. Samuelson, S. O.; Tobias, D. J.; Martyna, G. J. J. Phys. Chem. B 1997, 101, 7592. Reimann, C. T.; Velazquez, I.; Tapia, O. J. Phys. Chem. B 1998, 102, 2277.
  • 31
    • 0009090558 scopus 로고
    • Prediction of Protein Structure and the Principles of Protein Conformation, New York: Plenum
    • (1989)
    • Fasman, G.D.1
  • 32
    • 0009167771 scopus 로고    scopus 로고
    • Sternberg M.J.E. (Ed.), Protein Structure Prediction; A Practical Approach, New York: Oxford University Press
    • (1996)
  • 38
    • 0009091125 scopus 로고    scopus 로고
    • MATLAB Version 4; The Math Works, Inc.: Natick, MA, 1997.
  • 39
    • 0009167772 scopus 로고    scopus 로고
    • Mason, E. A.; McDaniel, E. W. Transport Properties of Ions in Gases; Wiley: New York, 1988.
  • 40
    • 0009245644 scopus 로고    scopus 로고
    • Samuelson, S. O.; Martyna, G. J. J. Chem. Phys. 1998, 109, 11061. Samuelson, S. O.; Martyna, G. J. J. Phys. Chem. B 1999, 103, 1752; Clemmer, D. E., unpublished results.
  • 41
    • 0009166550 scopus 로고
    • Findlay J.B.C., Gelsow M.J. (Eds.), Protein Sequencing; A Practical Approach, Oxford: IRL Press
    • (1989) , pp. 43
  • 42
    • 0009090834 scopus 로고    scopus 로고
    • It is important to note that parameters used for cross section calculations of the 11 peptides were slightly different than the 5-10-Lys parameterization set (Table 3) because the data for sequences obtained from tryptic digests of sperm whale myoglobin and yeast enolase were not originally available.
  • 44
    • 0009164476 scopus 로고    scopus 로고
    • Shvartsburg, A. A.; Jarrold, M. F. Chem. Phys. Lett. 1996, 261, 86. Mesleh, M. F.; Hunter, J. M.; Shvartsburg, A. A.; Schatz, G. C.; Jarrold, M. F. J. Phys. Chem. 1996, 100, 16082. Shvartsburg, A. A.; Schatz, G. C.; Jarrold, M. F. J. Chem. Phys. 1998, 108, 2416.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.