-
1
-
-
0002367729
-
MOLPHY, version 2.3: Programs for molecular phylogenetics based on maximum likelihood
-
Institute of Statistical Mathematics, Tokyo
-
ADACHI, J., AND M. HASEGAWA. 1996. MOLPHY, version 2.3: Programs for molecular phylogenetics based on maximum likelihood. Comput. Sci. Monogr. No. 28. Institute of Statistical Mathematics, Tokyo.
-
(1996)
Comput. Sci. Monogr.
, vol.28
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
ANDERSON, S., A. T. BANKIER, B. G. BARRELL, M. H. L. DE BRUIJN, A. R. COULSON, J. DROUIN, I. C. EPERON, D. P. NIERLICH, B. A. ROE, F. SANGER, P. H. SCHREIER, A. L. H. SMITH, R. STADEN, AND I. G. YOUNG. 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-464.
-
(1981)
Nature
, vol.290
, pp. 457-464
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
De Bruijn, M.H.L.4
Coulson, A.R.5
Drouin, J.6
Eperon, I.C.7
Nierlich, D.P.8
Roe, B.A.9
Sanger, F.10
Schreier, P.H.11
Smith, A.L.H.12
Staden, R.13
Young, I.G.14
-
3
-
-
0027367015
-
Comparison between the complete mtDNA sequences of the blue and the fin whale, two species that can hybridize in nature
-
ARNASON, U., AND A. GULLBERG. 1993. Comparison between the complete mtDNA sequences of the blue and the fin whale, two species that can hybridize in nature. J. Mol. Evol. 37:407-417.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 407-417
-
-
Arnason, U.1
Gullberg, A.2
-
4
-
-
0025287317
-
Phylogeny of the major tetrapod groups: Morphological data and divergence dates
-
BENTON, M. J. 1990. Phylogeny of the major tetrapod groups: Morphological data and divergence dates. J. Mol. Evol. 30:409-424.
-
(1990)
J. Mol. Evol.
, vol.30
, pp. 409-424
-
-
Benton, M.J.1
-
5
-
-
0019837699
-
Sequence and gene organization of mouse mitochondrial DNA
-
BIBB, M. J., R. A. VAN ETTEN, C. T. WRIGHT, M. W. WALBERG, AND D. A. CLAYTON. 1981. Sequence and gene organization of mouse mitochondrial DNA. Cell 26:167-180.
-
(1981)
Cell
, vol.26
, pp. 167-180
-
-
Bibb, M.J.1
Van Etten, R.A.2
Wright, C.T.3
Walberg, M.W.4
Clayton, D.A.5
-
6
-
-
0000367652
-
The limits of amino-acid sequence data in angiosperm phylogenetic reconstruction
-
BREMER, K. 1988. The limits of amino-acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42:795-803.
-
(1988)
Evolution
, vol.42
, pp. 795-803
-
-
Bremer, K.1
-
7
-
-
0031694349
-
Conflict amongst individual mitochondrial proteins in resolving the phylogeny of eutherian orders
-
CAO, Y., A. JANKE, P. J. WADDELL, M. WESTERMAN, O. TAKENAKA, S. MURATA, N. OKADA, S. PÄÄBO, AND M. HASEGAWA. 1998. Conflict amongst individual mitochondrial proteins in resolving the phylogeny of eutherian orders. J. Mol. Evol. 47:307-322.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 307-322
-
-
Cao, Y.1
Janke, A.2
Waddell, P.J.3
Westerman, M.4
Takenaka, O.5
Murata, S.6
Okada, N.7
Pääbo, S.8
Hasegawa, M.9
-
8
-
-
0031741694
-
The complete mitochondrial DNA sequence of the shark Mustelus manazo: Evaluating rooting contradictions with living bony vertebrates
-
CAO, Y., P. J. WADDELL, N. OKADA, AND M. HASEGAWA. 1998. The complete mitochondrial DNA sequence of the shark Mustelus manazo: Evaluating rooting contradictions with living bony vertebrates. Mol. Biol. Evol. 15:1637-1646.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1637-1646
-
-
Cao, Y.1
Waddell, P.J.2
Okada, N.3
Hasegawa, M.4
-
9
-
-
0031114555
-
α-Crystallin sequences support a Galliform/Anseriform clade
-
CASPERS, G.-J., D. U. DE WEERD, J. WATTEL, AND W. W. DE JONG. 1997. α-Crystallin sequences support a Galliform/Anseriform clade. Mol. Phylogenet. Evol. 7:185-188.
-
(1997)
Mol. Phylogenet. Evol.
, vol.7
, pp. 185-188
-
-
Caspers, G.-J.1
De Weerd, D.U.2
Wattel, J.3
De Jong, W.W.4
-
10
-
-
0029998015
-
Protein sequences indicate that turtles branched off from the amniote tree after mammals
-
CASPERS, G. J., G. J. REINDERS, J. A. LEUNISSEN, J. WATTEL, AND W. W. DE JONG. 1996. Protein sequences indicate that turtles branched off from the amniote tree after mammals. J. Mol. Evol. 42:580-586.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 580-586
-
-
Caspers, G.J.1
Reinders, G.J.2
Leunissen, J.A.3
Wattel, J.4
De Jong, W.W.5
-
11
-
-
0030621127
-
Mass survival of birds across the Cretaceous-Tertiary boundary: Molecular evidence
-
COOPER, A., AND D. PENNY. 1997. Mass survival of birds across the Cretaceous-Tertiary boundary: Molecular evidence. Science 275:1109-1113.
-
(1997)
Science
, vol.275
, pp. 1109-1113
-
-
Cooper, A.1
Penny, D.2
-
12
-
-
0001231133
-
Toward a phylogenetic classification of birds of the world (class Aves)
-
CRACRAFT, J. 1981. Toward a phylogenetic classification of birds of the world (class Aves). Auk 98:681-714.
-
(1981)
Auk
, vol.98
, pp. 681-714
-
-
Cracraft, J.1
-
13
-
-
0024417372
-
The early history of modern birds: A comparison of molecular and morphological evidence
-
(B. Fernholm, K. Bremer, and H. Jörnvall, eds.). Eisevier Science Publishers, Amsterdam
-
CRACRAFT, J., AND D. P. MINDELL. 1989. The early history of modern birds: A comparison of molecular and morphological evidence. Pages 389-403 in The hierarchy of life (B. Fernholm, K. Bremer, and H. Jörnvall, eds.). Eisevier Science Publishers, Amsterdam.
-
(1989)
The Hierarchy of Life
, pp. 389-403
-
-
Cracraft, J.1
Mindell, D.P.2
-
15
-
-
0025343497
-
Sequence and gene organization of the chicken mitochondrial genome
-
DESJARDINS, P., AND R. MORAIS. 1990. Sequence and gene organization of the chicken mitochondrial genome. J. Mol. Biol. 212:599-634.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 599-634
-
-
Desjardins, P.1
Morais, R.2
-
18
-
-
0001019878
-
Tetrapod classification
-
GARDINER, B. G. 1982. Tetrapod classification. Zool. J. Linn. Soc. 74:207-232.
-
(1982)
Zool. J. Linn. Soc.
, vol.74
, pp. 207-232
-
-
Gardiner, B.G.1
-
19
-
-
0024258114
-
Amniote phylogeny and the importance of fossils
-
GAUTHIER, J., A. G. KLUGE, T. ROWE. 1988. Amniote phylogeny and the importance of fossils. Cladistics 4:105-209.
-
(1988)
Cladistics
, vol.4
, pp. 105-209
-
-
Gauthier, J.1
Kluge, A.G.2
Rowe, T.3
-
20
-
-
0002163875
-
The monotremes and the palimpsest theory
-
GREGORY, W. K. 1947. The monotremes and the palimpsest theory. Bull. Am. Mus. Nat. Hist. 88:1-52.
-
(1947)
Bull. Am. Mus. Nat. Hist.
, vol.88
, pp. 1-52
-
-
Gregory, W.K.1
-
21
-
-
0029068893
-
Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites
-
Gu, X., Y-X. Fu, AND W.-H. LI. 1995. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Mol. Biol. Evol. 12:546-557.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 546-557
-
-
Gu, X.1
Fu, Y.-X.2
Li, W.-H.3
-
22
-
-
1842378594
-
The mtDNA sequence of the ostrich and the divergence between paleognathous and neognathous birds
-
HÄRLID, A., A. JANKE, U. ARNASON. 1997. The mtDNA sequence of the ostrich and the divergence between paleognathous and neognathous birds. Mol. Biol. Evol. 14:754-761.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 754-761
-
-
Härlid, A.1
Janke, A.2
Arnason, U.3
-
23
-
-
0031810766
-
Thecomplete mitochondrial genome of Rhea americana and early avian divergences
-
HÄRLID, A., A. JANKE, U. ARNASON. 1998. Thecomplete mitochondrial genome of Rhea americana and early avian divergences. J. Mol. Evol. 46:669-679.
-
(1998)
J. Mol. Evol.
, vol.46
, pp. 669-679
-
-
Härlid, A.1
Janke, A.2
Arnason, U.3
-
24
-
-
0029947159
-
Phylogenetic position of cetaceans relative to artiodactyls: Reanalysis of mitochondrial and nuclear sequences
-
HASEGAWA, M., AND J. ADACHI. 1996. Phylogenetic position of cetaceans relative to artiodactyls: Reanalysis of mitochondrial and nuclear sequences. Mol. Biol. Evol. 13:710-717.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 710-717
-
-
Hasegawa, M.1
Adachi, J.2
-
25
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASECAWA, M., H. KISHINO, AND T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 21:160-174.
-
(1985)
J. Mol. Evol.
, vol.21
, pp. 160-174
-
-
Hasecawa, M.1
Kishino, H.2
Yano, T.3
-
26
-
-
0029669270
-
Continental breakup and the ordinal diversification of birds and mammals
-
HEDGES, S. B., P. H. PARKER, C. G. SIBLEY, AND S. KUMAR. 1996. Continental breakup and the ordinal diversification of birds and mammals. Nature 381:226-229.
-
(1996)
Nature
, vol.381
, pp. 226-229
-
-
Hedges, S.B.1
Parker, P.H.2
Sibley, C.G.3
Kumar, S.4
-
27
-
-
0001955744
-
Studies on the phylogeny of birds
-
HOLMGREN, N. 1955. Studies on the phylogeny of birds. Acta Zool. 36:243-328.
-
(1955)
Acta Zool.
, vol.36
, pp. 243-328
-
-
Holmgren, N.1
-
28
-
-
0030778833
-
The complete mitochondrial genome of Alligator mississippiensis and the separation between recent Archosauria (birds and crocodiles)
-
JANKE, A., AND U. ARNASON. 1997. The complete mitochondrial genome of Alligator mississippiensis and the separation between recent Archosauria (birds and crocodiles). Mol. Biol. Evol. 14:1266-1272.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1266-1272
-
-
Janke, A.1
Arnason, U.2
-
29
-
-
0028270434
-
The marsupial mitochondrial genome and the evolution of placental mammals
-
JANKE, A., G. FELDMAIER-FUCHS, W. K. THOMAS, A. VON HAESELER, AND S. PÄÄBO. 1994. The marsupial mitochondrial genome and the evolution of placental mammals. Genetics 137:243-256.
-
(1994)
Genetics
, vol.137
, pp. 243-256
-
-
Janke, A.1
Feldmaier-Fuchs, G.2
Thomas, W.K.3
Von Haeseler, A.4
Pääbo, S.5
-
30
-
-
0029989450
-
The mitochondrial genome of a monotreme-the platypus (Ornithorhynchus anatinus)
-
JANKE, A., N. J. GEMMELL, G. FELDMAIER-FUCHS, A. VON HAESLER, AND S. PÄÄBO. 1996. The mitochondrial genome of a monotreme-the platypus (Ornithorhynchus anatinus). J. Mol. Evol. 42:153-159.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 153-159
-
-
Janke, A.1
Gemmell, N.J.2
Feldmaier-Fuchs, G.3
Von Haesler, A.4
Pääbo, S.5
-
31
-
-
0031026266
-
The complete mitochondrial genome of the wallaroo (Macropus robustiis) and the phylogenetic relationship among Monotremata, Marsupialia and Eutheria
-
JANKE, A., X. Xu, AND U. ARNASON. 1997. The complete mitochondrial genome of the wallaroo (Macropus robustiis) and the phylogenetic relationship among Monotremata, Marsupialia and Eutheria. Proc. Natl. Acad. Sci. USA 94:1276-1281.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 1276-1281
-
-
Janke, A.1
Xu, X.2
Arnason, U.3
-
32
-
-
0000732090
-
Evolution of protein molecules
-
(H. N. Munro, ed.). Academic Press, New York
-
JUKES, T. H., AND C. R. CANTOR. 1969. Evolution of protein molecules. Pages 21-132 in Mammalian protein metabolism (H. N. Munro, ed.). Academic Press, New York.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
33
-
-
0032578162
-
The platypus is not a rodent: DNA hybridization, amniote phylogeny and the palimpsest theory
-
KIRSCH, J-A. W., AND G. C. MAYER. 1998. The platypus is not a rodent: DNA hybridization, amniote phylogeny and the palimpsest theory. Phil. Trans. R. Soc. Lond. B 353:1221-1237.
-
(1998)
Phil. Trans. R. Soc. Lond. B
, vol.353
, pp. 1221-1237
-
-
Kirsch, J.-A.W.1
Mayer, G.C.2
-
34
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
KISHINO, H., AND M. HASEGAWA. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29, 170-179.
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
35
-
-
0025181359
-
Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
-
KISHINO, H., T. MIYATA, AND M. HASEGAWA. 1990. Maximum likelihood inference of protein phylogeny and the origin of chloroplasts. J. Mol. Evol. 30:151-160.
-
(1990)
J. Mol. Evol.
, vol.30
, pp. 151-160
-
-
Kishino, H.1
Miyata, T.2
Hasegawa, M.3
-
36
-
-
0032580152
-
A molecular time scale for vertebrate evolution
-
KUMAR, S. AND S. B. HEDGES. 1998. A molecular time scale for vertebrate evolution. Nature 392:917-920.
-
(1998)
Nature
, vol.392
, pp. 917-920
-
-
Kumar, S.1
Hedges, S.B.2
-
37
-
-
0021277009
-
A new method for calculating evolutionary substitution rates
-
LANAVE, C., G. PREPARATA, C. SACCONE, AND G. SERIO. 1984. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20:86-93.
-
(1984)
J. Mol. Evol.
, vol.20
, pp. 86-93
-
-
Lanave, C.1
Preparata, G.2
Saccone, C.3
Serio, G.4
-
38
-
-
0031283816
-
A phylogenetic analysis of basal Anseriformes, the fossil presbyornis, and the interordinal relationships of waterfowl
-
LIVEZEY, B. C. 1997. A phylogenetic analysis of basal Anseriformes, the fossil Presbyornis, and the interordinal relationships of waterfowl. Zool. J. Linn. Soc. 121:361-428.
-
(1997)
Zool. J. Linn. Soc.
, vol.121
, pp. 361-428
-
-
Livezey, B.C.1
-
39
-
-
0030001769
-
Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA repeat (Numt) in the nuclear genome
-
LOPEZ, J. V., M. CULVER, S. CEVARIO, AND S. J. O'BRIEN. 1996. Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA repeat (Numt) in the nuclear genome. Genomics 33:229-246.
-
(1996)
Genomics
, vol.33
, pp. 229-246
-
-
Lopez, J.V.1
Culver, M.2
Cevario, S.3
O'Brien, S.J.4
-
40
-
-
0002085148
-
On the classification of the taxon Tetrapoda
-
LØVTRUP, S. 1985. On the classification of the taxon Tetrapoda. Syst. Zool. 34:463-470.
-
(1985)
Syst. Zool.
, vol.34
, pp. 463-470
-
-
LØvtrup, S.1
-
41
-
-
84995189361
-
On the relationship of the Struthiones to the dinosaurs and to the rest of the avian class, with special reference to the position of Archaeopteryx
-
LOWE, P. R. 1935. On the relationship of the Struthiones to the dinosaurs and to the rest of the avian class, with special reference to the position of Archaeopteryx. Ibis 77:398-432.
-
(1935)
Syst. Zool.
, vol.77
, pp. 398-432
-
-
Lowe, P.R.1
-
42
-
-
0030781218
-
The cDNA cloning and molecular evolution of reptile and pigeon lactate dehydrogenase isozymes
-
MANNEN, H., S. C.-M. TSOI, J. S. KRUSHKAL, W.-H. LI, AND S. S.-L. LI. 1997. The cDNA cloning and molecular evolution of reptile and pigeon lactate dehydrogenase isozymes. Mol. Biol. Evol. 14:1081-1087.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1081-1087
-
-
Mannen, H.1
Tsoi, S.C.-M.2
Krushkal, J.S.3
Li, W.-H.4
Li, S.S.-L.5
-
43
-
-
0032169857
-
Multiple independent origins of mitochondrial gene order in birds. 1998
-
MINDELL, D. P., SORENSON, M. D., AND DIMCHEFF, D. E. 1998. Multiple independent origins of mitochondrial gene order in birds. 1998. Proc. Natl. Acad. Sci. USA 95:10693-10697.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10693-10697
-
-
Mindell, D.P.1
Sorenson, M.D.2
Dimcheff, D.E.3
-
44
-
-
0031760392
-
An extra nucleotide is not translated in mitochondrial ND3 of some birds and turtles
-
MINDELL, D. P., SORENSON, M. D., AND DIMCHEFF, D. E. 1998. An extra nucleotide is not translated in mitochondrial ND3 of some birds and turtles. Mol. Biol. Evol. 15:1568-1571.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1568-1571
-
-
Mindell, D.P.1
Sorenson, M.D.2
Dimcheff, D.E.3
-
45
-
-
0001923864
-
Phylogenetic relationships among and within select avian orders based on mitochondrial DNA
-
(D. P. Mindell, ed.). Academic Press, San Diego
-
MINDELL, D. P., SORENSON, M. D., HUDDLESTON, C. J., MIRANDA, H. C., JR., KNIGHT, A., SAWCHUK, S. J., AND YURI, T. 1997. Phylogenetic relationships among and within select avian orders based on mitochondrial DNA. Pages 213-247 in Avian molecular evolution and systematics (D. P. Mindell, ed.). Academic Press, San Diego.
-
(1997)
Avian Molecular Evolution and Systematics
, pp. 213-247
-
-
Mindell, D.P.1
Sorenson, M.D.2
Huddleston, C.J.3
Miranda H.C., Jr.4
Knight, A.5
Sawchuk, S.J.6
Yuri, T.7
-
46
-
-
0030484239
-
Rates of molecular evolution: Phylogenetic issues and applications
-
MINDELL, D. P., AND C. E. THACKER. 1996. Rates of molecular evolution: Phylogenetic issues and applications. Annu. Rev. Ecol. Syst. 27:279-303.
-
(1996)
Annu. Rev. Ecol. Syst.
, vol.27
, pp. 279-303
-
-
Mindell, D.P.1
Thacker, C.E.2
-
47
-
-
0024884582
-
Découverte de Passeriformes dans l'oligocene supérieur de France
-
MOURER-CHAUVIRÉ, C., C. HUGUENEY, AND P. JONET. 1989. Découverte de Passeriformes dans l'Oligocene supérieur de France. C. R. Acad. Sci. Ser. 2A 309:843-849.
-
(1989)
C. R. Acad. Sci. Ser. 2A
, vol.309
, pp. 843-849
-
-
Mourer-Chauviré, C.1
Hugueney, C.2
Jonet, P.3
-
48
-
-
0032028997
-
Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences
-
NAYLOR, G. J. P., AND W. M. BROWN. 1998. Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences. Syst. Biol. 47:61-76.
-
(1998)
Syst. Biol.
, vol.47
, pp. 61-76
-
-
Naylor, G.J.P.1
Brown, W.M.2
-
50
-
-
0002917883
-
A late Cretaceous presbyornithidae (Aves: Anseriformes) from Vega Island, Antarctic Peninsula: Paleobiogeographic implications
-
NORIEGA, J. I., AND C. P. TAMBUSSI. 1995. A late Cretaceous Presbyornithidae (Aves: Anseriformes) from Vega Island, Antarctic Peninsula: Paleobiogeographic implications. Ameghiniana 32:57-61.
-
(1995)
Ameghiniana
, vol.32
, pp. 57-61
-
-
Noriega, J.I.1
Tambussi, C.P.2
-
51
-
-
0001845745
-
The fossil record of birds
-
(D. S. Farner, J. R. King, and K. C. Parkes, eds.). Academic Press, New York
-
OLSON, S. L. 1985. The fossil record of birds. Pages 79-238 in Avian biology, (D. S. Farner, J. R. King, and K. C. Parkes, eds.). Academic Press, New York.
-
(1985)
Avian Biology
, pp. 79-238
-
-
Olson, S.L.1
-
52
-
-
0001296457
-
Neogaeornis wetzeli Lambrecht: A Cretaceous loon from Chile
-
OLSON, S. L. 1992. Neogaeornis wetzeli Lambrecht: A Cretaceous loon from Chile. J. Vertebr. Paleontol. 12:122-124.
-
(1992)
J. Vertebr. Paleontol.
, vol.12
, pp. 122-124
-
-
Olson, S.L.1
-
53
-
-
0030923559
-
... and turn back again
-
PLATZ, J. E., AND J. M. CONLAN. 1997. ... and turn back again. Nature 389:246.
-
(1997)
Nature
, vol.389
, pp. 246
-
-
Platz, J.E.1
Conlan, J.M.2
-
54
-
-
0001224656
-
Monophyly of the Passeriformes: Test of a phylogenetic hypothesis
-
RAIKOW, R. J. 1982. Monophyly of the Passeriformes: Test of a phylogenetic hypothesis. Auk 99:431-445.
-
(1982)
Auk
, vol.99
, pp. 431-445
-
-
Raikow, R.J.1
-
55
-
-
0000480838
-
Why are there so many kinds of passerine birds?
-
RAIKOW, R. J. 1986. Why are there so many kinds of passerine birds? Syst. Zool. 35:255-259.
-
(1986)
Syst. Zool.
, vol.35
, pp. 255-259
-
-
Raikow, R.J.1
-
56
-
-
0031981792
-
The mitochondrial DNA molecule of the hagfish (Myxine glutinosa) and vertebrate phylogeny
-
RASMUSSEN, A., A. JANKE, AND U. ARNASON. 1998. The mitochondrial DNA molecule of the hagfish (Myxine glutinosa) and vertebrate phylogeny. J. Mol. Evol. 46:382-388.
-
(1998)
J. Mol. Evol.
, vol.46
, pp. 382-388
-
-
Rasmussen, A.1
Janke, A.2
Arnason, U.3
-
57
-
-
0029660251
-
Turtles as diapsid reptiles
-
RIEPPEL, O., AND M. DEBRAGA. 1996. Turtles as diapsid reptiles. Nature 384:453-455.
-
(1996)
Nature
, vol.384
, pp. 453-455
-
-
Rieppel, O.1
Debraga, M.2
-
58
-
-
0025267792
-
The general stochastic model of nucleotide substitution
-
RODRÍGUEZ, E, J. L. OLIVER, A. MARÍN, AND J. R. MEDINA. 1990. The general stochastic model of nucleotide substitution. J. Theor. Biol. 142:485-501.
-
(1990)
J. Theor. Biol.
, vol.142
, pp. 485-501
-
-
Rodríguez, E.1
Oliver, J.L.2
Marín, A.3
Medina, J.R.4
-
59
-
-
0021876634
-
The complete nucleotide sequence of the Xenopus laevis mitochondrial genome
-
ROE, B. A, D.-P. MA, R. K. WILSON, AND J. E-H. WONG. 1985. The complete nucleotide sequence of the Xenopus laevis mitochondrial genome. J. Biol. Chem. 260:9759-9774.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 9759-9774
-
-
Roe, B.A.1
Ma, D.-P.2
Wilson, R.K.3
Wong, J.E.-H.4
-
60
-
-
0000787344
-
A comparative study of the egg-white proteins of non-passerine birds
-
SIBLEY, C. G., AND J. E. AHLQUIST. 1972. A comparative study of the egg-white proteins of non-passerine birds. Bull. Peabody Mus. Nat. Hist. 39:1-276.
-
(1972)
Bull. Peabody Mus. Nat. Hist.
, vol.39
, pp. 1-276
-
-
Sibley, C.G.1
Ahlquist, J.E.2
-
62
-
-
0031884718
-
Numts: A challenge for avian systematics and population biology
-
SORENSON, M. D., AND T. W. QUINN. 1998. Numts: A challenge for avian systematics and population biology. Auk. 115:214-221.
-
(1998)
Auk.
, vol.115
, pp. 214-221
-
-
Sorenson, M.D.1
Quinn, T.W.2
-
63
-
-
0033161156
-
Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates
-
SORENSON, M. D., AST, J. C., DIMCHEFF, D. E., YURI, T., AND MINDELL, D. P. In press. Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates. Mol. Phylogenet. Evol.
-
Mol. Phylogenet. Evol.
-
-
Sorenson, M.D.1
Ast, J.C.2
Dimcheff, D.E.3
Yuri, T.4
Mindell, D.P.5
-
65
-
-
0002671410
-
Some probabilistic and statistical problems on the analysis of DNA sequences
-
TAVARÉ, S. 1986. Some probabilistic and statistical problems on the analysis of DNA sequences. Lect. Math. Life Sci. 17:57-86.
-
(1986)
Lect. Math. Life Sci.
, vol.17
, pp. 57-86
-
-
Tavaré, S.1
-
66
-
-
0031574072
-
The clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
THOMPSON, J. D., T. J. GIBSON, F. PLEWNIAK, J. JEANMOUCIN, AND D. G. HIGGINS. 1997. The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmoucin, J.4
Higgins, D.G.5
-
67
-
-
0033084970
-
Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-logdet plus site stripping, to detect internal conflicts in the data, with special reference to the position of hedgehog, armadillo, and elephant
-
this issue
-
WADDELL, P. J., Y. CAO, AND M. HASEGAWA. 1999 Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with special reference to the position of hedgehog, armadillo, and elephant. Syst. Biol. 48:31-53 (this issue).
-
(1999)
Syst. Biol.
, vol.48
, pp. 31-53
-
-
Waddell, P.J.1
Cao, Y.2
Hasegawa, M.3
-
68
-
-
0033085003
-
Assessing the Cretaceous superordinal divergence times within birds and placental mammals using whole mitochondrial protein sequences and an extended statistical framework
-
this issue
-
WADDELL, P. J., Y. CAO, M. HASECAWA, AND D. P. MINDELL. 1999b. Assessing the Cretaceous superordinal divergence times within birds and placental mammals using whole mitochondrial protein sequences and an extended statistical framework. Syst. Biol. 48:119-137 (this issue).
-
(1999)
Syst. Biol.
, vol.48
, pp. 119-137
-
-
Waddell, P.J.1
Cao, Y.2
Hasecawa, M.3
Mindell, D.P.4
-
69
-
-
0002574561
-
Evolutionary trees of apes and humans from DNA sequences
-
(A. J. Lock, and C. R. Peters, eds.). Oxford Univ. Press, Oxford, England
-
WADDELL, P. J., AND D. PENNY. 1996. Evolutionary trees of apes and humans from DNA sequences. Pages 53-73 in Handbook of human symbolic evolution (A. J. Lock, and C. R. Peters, eds.). Oxford Univ. Press, Oxford, England.
-
(1996)
Handbook of Human Symbolic Evolution
, pp. 53-73
-
-
Waddell, P.J.1
Penny, D.2
-
70
-
-
0029907541
-
The complete mitochondrial DNA sequences of the greater Indian rhinoceros, Rhinoceros unicornis, and the phylogenetic relationship among carnivora, perissodactyla, and artiodactyla (+ Cetacea)
-
Xu, S., A. JANKE, AND U. ARNASON. 1996. The complete mitochondrial DNA sequences of the greater Indian rhinoceros, Rhinoceros unicornis, and the phylogenetic relationship among Carnivora, Perissodactyla, and Artiodactyla (+ Cetacea). Mol. Biol. Evol. 13:1167-1173.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 1167-1173
-
-
Xu, S.1
Janke, A.2
Arnason, U.3
-
71
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
YANG, Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods. J. Mol. Evol. 39:306-314.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 306-314
-
-
Yang, Z.1
-
72
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
YANG, Z. 1997. PAML: A program package for phylogenetic analysis by maximum likelihood. CABIOS 13:555-556.
-
(1997)
CABIOS
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
73
-
-
0032564364
-
Complete mitochondrial genome suggests diapsid affinities of turtles
-
ZARDOYA, R. AND A. MEYER. 1998. Complete mitochondrial genome suggests diapsid affinities of turtles. Proc. Natl. Acad. Sci. USA 95:14226-14231.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 14226-14231
-
-
Zardoya, R.1
Meyer, A.2
|