메뉴 건너뛰기




Volumn 77, Issue 2, 1999, Pages 775-788

Evolutionary relationship between K+ channels and symporters

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BACTERIAL PROTEIN; BACTERIORHODOPSIN; CARRIER PROTEIN; POTASSIUM CHANNEL; POTASSIUM ION; SODIUM CHANNEL;

EID: 0032780667     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(99)76931-6     Document Type: Article
Times cited : (152)

References (63)
  • 5
    • 0031864543 scopus 로고    scopus 로고
    • The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998
    • Bairoch, A., and R. Apweiler. 1998. The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998. Nucleic Acids Res. 26:38-42.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 38-42
    • Bairoch, A.1    Apweiler, R.2
  • 8
    • 0024447794 scopus 로고
    • +-transport protein TrkA of Escherichia coli is a peripheral membrane protein that requires other trk gene products for attachment to the cytoplasmic membrane
    • +-transport protein TrkA of Escherichia coli is a peripheral membrane protein that requires other trk gene products for attachment to the cytoplasmic membrane. J. Biol Chem. 264:16403-16410.
    • (1989) J. Biol Chem. , vol.264 , pp. 16403-16410
    • Bossemeyer, D.1    Borchard, A.2    Dosch, D.C.3    Helmer, G.C.4    Epstein, W.5    Booth, I.R.6    Bakker, E.P.7
  • 9
    • 0031000180 scopus 로고    scopus 로고
    • The first genome from the third domain of life
    • Clayton, R. A., O. White, K. A. Ketchum, and J. C. Venter. 1997. The first genome from the third domain of life. Nature. 387:459-462.
    • (1997) Nature , vol.387 , pp. 459-462
    • Clayton, R.A.1    White, O.2    Ketchum, K.A.3    Venter, J.C.4
  • 12
    • 0026098110 scopus 로고
    • Genetic analysis of potassium transport loci in Escherichia coli: Evidence for three constitutive systems mediating uptake potassium
    • Dosch, D. C., G. L. Helmer, S. H. Sutton, F. F. Salvacion, and W. Epstein. 1991. Genetic analysis of potassium transport loci in Escherichia coli: evidence for three constitutive systems mediating uptake potassium. J. Bacteriol. 173:687-696.
    • (1991) J. Bacteriol. , vol.173 , pp. 687-696
    • Dosch, D.C.1    Helmer, G.L.2    Sutton, S.H.3    Salvacion, F.F.4    Epstein, W.5
  • 15
    • 0024042922 scopus 로고
    • TRK1 encodes a plasma membrane protein required for high-affinity potassium transport in Saccharomyces cerevisiae
    • Gaber, R. F., C. A. Styles, and G. R. Fink. 1988. TRK1 encodes a plasma membrane protein required for high-affinity potassium transport in Saccharomyces cerevisiae. Mol. Cell. Biol. 8:2848-2859.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 2848-2859
    • Gaber, R.F.1    Styles, C.A.2    Fink, G.R.3
  • 16
    • 0032573159 scopus 로고    scopus 로고
    • Patch-clamp and amperometric recordings from norepinephrine transporters: Channel activity and voltage-dependent uptake
    • Galli, A., R. D. Blakely, and L. J. DeFelice. 1998. Patch-clamp and amperometric recordings from norepinephrine transporters: channel activity and voltage-dependent uptake. Proc. Natl. Acad. Sci. USA. 95: 13260-13265.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 13260-13265
    • Galli, A.1    Blakely, R.D.2    DeFelice, L.J.3
  • 17
    • 0029188714 scopus 로고
    • + channels
    • D. Dawson, editor. The Rockefeller University Press, New York
    • + channels. In Ion Channels and Genetic Diseases, D. Dawson, editor. The Rockefeller University Press, New York, 1-16.
    • (1995) Ion Channels and Genetic Diseases , pp. 1-16
    • Guy, H.R.1    Durell, S.R.2
  • 18
    • 0032938490 scopus 로고    scopus 로고
    • Cloning of two genes encoding potassium transporters in Neurospora crassa and expression on the corresponding cDNAs in Saccharomyces cerevisiae
    • Haro, R., L. Sainz, F. Rubio, and A. Rodriguez-Navarro. 1999. Cloning of two genes encoding potassium transporters in Neurospora crassa and expression on the corresponding cDNAs in Saccharomyces cerevisiae. Mol. Microbiol. 31:511-520.
    • (1999) Mol. Microbiol. , vol.31 , pp. 511-520
    • Haro, R.1    Sainz, L.2    Rubio, F.3    Rodriguez-Navarro, A.4
  • 19
    • 0029977162 scopus 로고    scopus 로고
    • Using substitution probabilities to improve position-specific scoring matrices
    • Henikoff, J. G., and S. Henikoff. 1996. Using substitution probabilities to improve position-specific scoring matrices. Comput. Appl. Biosci. 12: 135-143.
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 135-143
    • Henikoff, J.G.1    Henikoff, S.2
  • 20
    • 0026410103 scopus 로고
    • Automated assembly of protein blocks for database searching
    • Henikoff, S., and J. G. Henikoff. 1991. Automated assembly of protein blocks for database searching. Nucleic Acids Res. 19:6565-6572.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6565-6572
    • Henikoff, S.1    Henikoff, J.G.2
  • 21
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff, S., and J. G. Henikoff. 1992. Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA. 89:10915-10919.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 22
    • 0028043552 scopus 로고
    • Position-based sequence weights
    • Henikoff, S., and J. G. Henikoff. 1994. Position-based sequence weights. J. Mol. Biol. 243:574-578.
    • (1994) J. Mol. Biol. , vol.243 , pp. 574-578
    • Henikoff, S.1    Henikoff, J.G.2
  • 23
    • 0000207681 scopus 로고
    • TMbase - A database of membrane spanning protein segments
    • Hofmann, K., and W. Stoffel. 1993. TMbase - a database of membrane spanning protein segments. Biol. Chem. Hoppe-Seyler. 347:166.
    • (1993) Biol. Chem. Hoppe-Seyler , vol.347 , pp. 166
    • Hofmann, K.1    Stoffel, W.2
  • 25
    • 0028093476 scopus 로고
    • Potassium channels and their evolving gates
    • Jan, L. Y., and Y. N. Jan. 1994. Potassium channels and their evolving gates. Nature. 371:119-122.
    • (1994) Nature , vol.371 , pp. 119-122
    • Jan, L.Y.1    Jan, Y.N.2
  • 26
    • 0001847927 scopus 로고    scopus 로고
    • Cloned potassium channels from eukaryotes and prokaryotes
    • Jan, L. Y., and Y. N. Jan. 1997. Cloned potassium channels from eukaryotes and prokaryotes. Annu. Rev. Neurosci. 20:91-123.
    • (1997) Annu. Rev. Neurosci. , vol.20 , pp. 91-123
    • Jan, L.Y.1    Jan, Y.N.2
  • 27
    • 0014029736 scopus 로고
    • Simple allosteric model for membrane pumps
    • Jardetzky, O. 1966. Simple allosteric model for membrane pumps. Nature. 211:969-970.
    • (1966) Nature , vol.211 , pp. 969-970
    • Jardetzky, O.1
  • 28
    • 0032565960 scopus 로고    scopus 로고
    • Two feathered dinosaurs from northeastern China
    • Ji, O., P. J. Currie, M. A. Norell, and S.-A. Ji. 1998. Two feathered dinosaurs from northeastern China. Nature. 393:753-761.
    • (1998) Nature , vol.393 , pp. 753-761
    • Ji, O.1    Currie, P.J.2    Norell, M.A.3    Ji, S.-A.4
  • 30
    • 0029099458 scopus 로고
    • A new family of outwardly rectifying potassium channel proteins with two pore domains in tandem
    • Ketchum, K. A., W. J. Joiner, A. J. Sellers, L. K. Kaczmarek, and S. A. Goldstein. 1995. A new family of outwardly rectifying potassium channel proteins with two pore domains in tandem. Nature. 376:690-695.
    • (1995) Nature , vol.376 , pp. 690-695
    • Ketchum, K.A.1    Joiner, W.J.2    Sellers, A.J.3    Kaczmarek, L.K.4    Goldstein, S.A.5
  • 31
    • 0025822954 scopus 로고
    • + transporters in Saccharomyces cerevisiae
    • + transporters in Saccharomyces cerevisiae. Mol. Cell. Biol. 11:4266-4273.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 4266-4273
    • Ko, C.H.1    Gaber, R.F.2
  • 32
    • 0030030516 scopus 로고    scopus 로고
    • Noise analysis of the glutamate-activated current in photoreceptors
    • Larsson, H. P., S. A. Picaud, F. S. Werblin, and H. Lecar. 1996. Noise analysis of the glutamate-activated current in photoreceptors. Biophys. J. 70:733-742.
    • (1996) Biophys. J. , vol.70 , pp. 733-742
    • Larsson, H.P.1    Picaud, S.A.2    Werblin, F.S.3    Lecar, H.4
  • 33
    • 0018799006 scopus 로고
    • A channel mechanism for electrogenic ion pumps
    • Lauger, P. 1979. A channel mechanism for electrogenic ion pumps. Biochim. Biophys. Acta. 552:143-161.
    • (1979) Biochim. Biophys. Acta , vol.552 , pp. 143-161
    • Lauger, P.1
  • 34
    • 0342916006 scopus 로고    scopus 로고
    • Molecular genetic analysis of membrane protein topology
    • W. N. Konings, H. R. Kaback, and J. S. Lolkema, editors. Elsevier, New York
    • Lee, M., and C. Manoil. 1996. Molecular genetic analysis of membrane protein topology. In Transport Processes in Eukaryotic and Prokaryotic Organisms. W. N. Konings, H. R. Kaback, and J. S. Lolkema, editors. Elsevier, New York. 189-202.
    • (1996) Transport Processes in Eukaryotic and Prokaryotic Organisms , pp. 189-202
    • Lee, M.1    Manoil, C.2
  • 36
    • 0029833538 scopus 로고    scopus 로고
    • The SpTRK gene encodes a potassium-specific transport protein TKHp in Schizosaccharomyces pombe
    • Lichtenberg-Fraté, H., J. D. Reid, M. Heyer, and M. Hofer. 1996. The SpTRK gene encodes a potassium-specific transport protein TKHp in Schizosaccharomyces pombe. J. Membr. Biol. 152:169-181.
    • (1996) J. Membr. Biol. , vol.152 , pp. 169-181
    • Lichtenberg-Fraté, H.1    Reid, J.D.2    Heyer, M.3    Hofer, M.4
  • 37
    • 0028960949 scopus 로고
    • Silver as a probe of pore-forming residues in a potassium channel
    • Lü, Q., and C. Miller. 1995. Silver as a probe of pore-forming residues in a potassium channel. Science. 268:304-307.
    • (1995) Science , vol.268 , pp. 304-307
    • Lü, Q.1    Miller, C.2
  • 38
    • 0028609781 scopus 로고
    • + channel β subunits belong to an NAD(P)H-dependent oxidoreductase superfamily
    • + channel β subunits belong to an NAD(P)H-dependent oxidoreductase superfamily. Cell. 79:1133-1135.
    • (1994) Cell , vol.79 , pp. 1133-1135
    • McCormack, T.1    McCormack, K.2
  • 39
    • 0026036336 scopus 로고
    • The cloning and DNA sequence of the gene for the glutathione-regulated potassium-efflux system KefC of Escherichia coli
    • Munro, A. W., G. Y. Ritchie, A. J. Lamb, R. M. Douglas, and I. R. Booth. 1991. The cloning and DNA sequence of the gene for the glutathione-regulated potassium-efflux system KefC of Escherichia coli. Mol. Microbiol. 5:607-616.
    • (1991) Mol. Microbiol. , vol.5 , pp. 607-616
    • Munro, A.W.1    Ritchie, G.Y.2    Lamb, A.J.3    Douglas, R.M.4    Booth, I.R.5
  • 40
    • 0031688964 scopus 로고    scopus 로고
    • Cloning of the trkAH gene cluster and characterization of the Trk K(+)-uptake system of Vibrio alginolyticus
    • Nakamura, T., N. Yamamuro, S. Stumpe, T. Unemoto, and E. P. Bakker. 1998a. Cloning of the trkAH gene cluster and characterization of the Trk K(+)-uptake system of Vibrio alginolyticus. Microbiology. 144: 2281-2289.
    • (1998) Microbiology , vol.144 , pp. 2281-2289
    • Nakamura, T.1    Yamamuro, N.2    Stumpe, S.3    Unemoto, T.4    Bakker, E.P.5
  • 43
    • 0027934102 scopus 로고
    • A salmonella protein that is required for resistance to antimicrobial peptides and transport of potassium
    • Parra-Lopez, C., R. Lin, A. Aspedon, and E. A. Groisman. 1994. A Salmonella protein that is required for resistance to antimicrobial peptides and transport of potassium. EMBO J. 13:3964-3972.
    • (1994) EMBO J. , vol.13 , pp. 3964-3972
    • Parra-Lopez, C.1    Lin, R.2    Aspedon, A.3    Groisman, E.A.4
  • 46
    • 0029789461 scopus 로고    scopus 로고
    • Searching databases of conserved sequence regions by aligning protein multiple-alignments
    • Pietrokovski, S. 1996. Searching databases of conserved sequence regions by aligning protein multiple-alignments. Nucleic Acids Res. 24: 3836-3845.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3836-3845
    • Pietrokovski, S.1
  • 47
    • 0029975979 scopus 로고    scopus 로고
    • The S. Cerevisiae outwardly-rectifying potassium channel (DUK1) identifies a new family of channels with duplicated pore domains
    • Reid, J. D., W. Lukas, R. Shafaatian, A. Bertl, C. Scheurmann-Kettner, H. R. Guy, and R. A. North. 1996. The S. cerevisiae outwardly-rectifying potassium channel (DUK1) identifies a new family of channels with duplicated pore domains. Receptors Channels. 4:51-62.
    • (1996) Receptors Channels , vol.4 , pp. 51-62
    • Reid, J.D.1    Lukas, W.2    Shafaatian, R.3    Bertl, A.4    Scheurmann-Kettner, C.5    Guy, H.R.6    North, R.A.7
  • 49
    • 0029583478 scopus 로고
    • Sodium-driven potassium uptake by the plant potassium transporter HKT1 and mutations conferring salt tolerance
    • Rubio, F., W. Gassmann, and J. I. Schroeder. 1995. Sodium-driven potassium uptake by the plant potassium transporter HKT1 and mutations conferring salt tolerance. Science. 270:1660-1663.
    • (1995) Science , vol.270 , pp. 1660-1663
    • Rubio, F.1    Gassmann, W.2    Schroeder, J.I.3
  • 50
    • 0028114234 scopus 로고
    • Structure and transport mechanism of a high-affinity potassium uptake transporter from higher plants
    • Schachtman, D. P., and J. I. Schroeder. 1994. Structure and transport mechanism of a high-affinity potassium uptake transporter from higher plants. Nature. 370:655-658.
    • (1994) Nature , vol.370 , pp. 655-658
    • Schachtman, D.P.1    Schroeder, J.I.2
  • 51
    • 0027239791 scopus 로고
    • NAD+ binding to the Escherichia coli K(+)-uplake protein TrkA and sequence similarity between TrkA and domains of a family of dehydrogenases suggest a role for NAD+ in bacterial transport
    • Schlösser, A., A. Hamann, D. Bossemeyer, E. Schneider, and E. P. Bakker. 1993. NAD+ binding to the Escherichia coli K(+)-uplake protein TrkA and sequence similarity between TrkA and domains of a family of dehydrogenases suggest a role for NAD+ in bacterial transport. Mol. Microbiol. 9:533-543.
    • (1993) Mol. Microbiol. , vol.9 , pp. 533-543
    • Schlösser, A.1    Hamann, A.2    Bossemeyer, D.3    Schneider, E.4    Bakker, E.P.5
  • 52
    • 0025897380 scopus 로고
    • Subcloning, nucleotide sequence, and expression of trkG, a gene that encodes an integral membrane protein involved in potassium uptake via the Trk system of Escherichia coli
    • Schlosser, A., S. Kluttig, A. Hamann, and E. P. Bakker. 1991. Subcloning, nucleotide sequence, and expression of trkG, a gene that encodes an integral membrane protein involved in potassium uptake via the Trk system of Escherichia coli. J. Bacteriol. 173:3170-3176.
    • (1991) J. Bacteriol. , vol.173 , pp. 3170-3176
    • Schlosser, A.1    Kluttig, S.2    Hamann, A.3    Bakker, E.P.4
  • 53
    • 0028969793 scopus 로고
    • TrkH and its homolog, TrkG, determine the specificity and kinetics of cation transport by the Trk system of Escherichia coli
    • Schlösser, A., M. Meldorf, S. Stumpe, E. P. Bakker, and W. Epstein. 1995. TrkH and its homolog, TrkG, determine the specificity and kinetics of cation transport by the Trk system of Escherichia coli. J. Bacteriol. 177:1908-1910.
    • (1995) J. Bacteriol. , vol.177 , pp. 1908-1910
    • Schlösser, A.1    Meldorf, M.2    Stumpe, S.3    Bakker, E.P.4    Epstein, W.5
  • 54
    • 0030896795 scopus 로고    scopus 로고
    • Topology of the Shaker potassium channel probed with hydrophilic epitope insertions
    • Shih, T. M., and A. L. Goldin. 1997. Topology of the Shaker potassium channel probed with hydrophilic epitope insertions. J. Cell Biol. 136: 1037-1045.
    • (1997) J. Cell Biol. , vol.136 , pp. 1037-1045
    • Shih, T.M.1    Goldin, A.L.2
  • 55
    • 0027497515 scopus 로고
    • Molecular evolution of voltage-sensitive ion channel genes: On the origins of electrical excitability
    • Strong, M., K. G. Chandy, and G. A. Gutman. 1993. Molecular evolution of voltage-sensitive ion channel genes: on the origins of electrical excitability. Mol. Biol. Evol. 10:221-242.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 221-242
    • Strong, M.1    Chandy, K.G.2    Gutman, G.A.3
  • 57
    • 0030051119 scopus 로고    scopus 로고
    • A multi-substrate single-file model for ion-coupled transporters
    • Su, A., S. Mager, S. L. Mayo, and H. A. Lester. 1996. A multi-substrate single-file model for ion-coupled transporters. Biophys. J. 70:762-777.
    • (1996) Biophys. J. , vol.70 , pp. 762-777
    • Su, A.1    Mager, S.2    Mayo, S.L.3    Lester, H.A.4
  • 58
    • 0028206477 scopus 로고
    • Sequencing and characterization of the ntp gene cluster for vacuolar-type Na(+)-translocating ATPase of Enterococcus hirae
    • Takase, K., S. Kakinuma, I. Yamato, K. Konishi, K. Igarashi, and Y. Kakinuma. 1994. Sequencing and characterization of the ntp gene cluster for vacuolar-type Na(+)-translocating ATPase of Enterococcus hirae. J. Biol. Chem. 269:11037-11044.
    • (1994) J. Biol. Chem. , vol.269 , pp. 11037-11044
    • Takase, K.1    Kakinuma, S.2    Yamato, I.3    Konishi, K.4    Igarashi, K.5    Kakinuma, Y.6
  • 59
    • 0028091659 scopus 로고
    • Detection of conserved segments in proteins: Iterative scanning of sequence databases with alignment blocks
    • Tatusov, R. L., S. F. Altschul, and E. V. Koonin. 1994. Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks. Proc. Natl. Acad. Sci. USA. 91:12091-12095.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 12091-12095
    • Tatusov, R.L.1    Altschul, S.F.2    Koonin, E.V.3
  • 61
    • 0032544015 scopus 로고    scopus 로고
    • Determination of transmembrane topology of an inward-rectifying potassium channel from Arabidopsis thaliana based on functional expression in Escherichia coli
    • Uozumi, N., T. Nakamura, J. I. Schroeder, and S. Muto. 1998. Determination of transmembrane topology of an inward-rectifying potassium channel from Arabidopsis thaliana based on functional expression in Escherichia coli. Proc. Natl. Acad. Sci. USA. 95:9773-9778.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 9773-9778
    • Uozumi, N.1    Nakamura, T.2    Schroeder, J.I.3    Muto, S.4
  • 62
    • 0000036691 scopus 로고    scopus 로고
    • Rapid up-regulation of HKT1, a high-affinity potassium transporter gene, in roots of barley and wheat following withdrawal of potassium
    • Wang, T. B., W. Gassmann, F. Rubio, J. I. Schroeder, and A. D. Glass. 1998. Rapid up-regulation of HKT1, a high-affinity potassium transporter gene, in roots of barley and wheat following withdrawal of potassium. Plant Physiol. 118:651-659.
    • (1998) Plant Physiol. , vol.118 , pp. 651-659
    • Wang, T.B.1    Gassmann, W.2    Rubio, F.3    Schroeder, J.I.4    Glass, A.D.5
  • 63
    • 0032560170 scopus 로고    scopus 로고
    • Structure of the calcium pump from sarcoplasmic reticulum at 8-Å resolution
    • Zhang, P., C. Toyoshima, K. Yonekura, N. M. Green, and D. L. Stokes. 1998. Structure of the calcium pump from sarcoplasmic reticulum at 8-Å resolution. Nature. 392:835-839.
    • (1998) Nature , vol.392 , pp. 835-839
    • Zhang, P.1    Toyoshima, C.2    Yonekura, K.3    Green, N.M.4    Stokes, D.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.