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Volumn 9, Issue 11, 1999, Pages 1019-1025

Hunting with traps: Genome-wide strategies for gene discovery and functional analysis

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

EID: 0032728166     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.9.11.1019     Document Type: Review
Times cited : (32)

References (52)
  • 1
    • 0021354051 scopus 로고
    • Generation of a Tn5 promoter probe and its use in the study of gene expression in Caulobacter crescentus
    • Bellofatto, V., L. Shapiro, and D.A. Hodgson. 1984. Generation of a Tn5 promoter probe and its use in the study of gene expression in Caulobacter crescentus. Proc. Natl. Acad. Sci. 81: 1035-1039.
    • (1984) Proc. Natl. Acad. Sci. , vol.81 , pp. 1035-1039
    • Bellofatto, V.1    Shapiro, L.2    Hodgson, D.A.3
  • 4
    • 0032505679 scopus 로고    scopus 로고
    • Efficient gene trap screening for novel developmental genes using IRES beta geo vector and in vitro preselection
    • Bonaldo, P., K. Chowdhury, A. Stoykova, M. Torres, and P. Gruss. 1998. Efficient gene trap screening for novel developmental genes using IRES beta geo vector and in vitro preselection. Exp. Cell Res. 244: 125-136.
    • (1998) Exp. Cell Res. , vol.244 , pp. 125-136
    • Bonaldo, P.1    Chowdhury, K.2    Stoykova, A.3    Torres, M.4    Gruss, P.5
  • 5
    • 0007253213 scopus 로고
    • Analysis of mammalian cell genetic regulation in situ by using retrovirus-derived "portable exons" carrying the Escherichia coli lacZ gene
    • Brenner, D.G., S. Lin-Chao, and S.N. Cohen. 1989. Analysis of mammalian cell genetic regulation in situ by using retrovirus-derived "portable exons" carrying the Escherichia coli lacZ gene. Proc. Natl. Acad. Sci. 86: 5517-5521.
    • (1989) Proc. Natl. Acad. Sci. , vol.86 , pp. 5517-5521
    • Brenner, D.G.1    Lin-Chao, S.2    Cohen, S.N.3
  • 6
    • 0024328536 scopus 로고
    • Altering the genome by homologous recombination
    • Capecchi, M.R. 1989. Altering the genome by homologous recombination. Science 244: 1288-1292.
    • (1989) Science , vol.244 , pp. 1288-1292
    • Capecchi, M.R.1
  • 7
    • 0000366608 scopus 로고
    • Lactose genes fused to exogenous promoters in one step using a Mu-lac bacteriophage: In vivo probe for transcriptional control sequences
    • Casadaban, M.J. and S.N. Cohen. 1979. Lactose genes fused to exogenous promoters in one step using a Mu-lac bacteriophage: In vivo probe for transcriptional control sequences. Proc. Natl. Acad. Sci. 76: 4530-4533.
    • (1979) Proc. Natl. Acad. Sci. , vol.76 , pp. 4530-4533
    • Casadaban, M.J.1    Cohen, S.N.2
  • 8
    • 0030879143 scopus 로고    scopus 로고
    • Evidence for the stochastic integration of gene trap vectors into the mouse germline
    • Chowdhury, K., P. Bonaldo, M. Torres, A. Stoykova, and P. Gruss. 1997. Evidence for the stochastic integration of gene trap vectors into the mouse germline. Nucleic Acids Res. 25: 1531-1536.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 1531-1536
    • Chowdhury, K.1    Bonaldo, P.2    Torres, M.3    Stoykova, A.4    Gruss, P.5
  • 9
    • 0028825575 scopus 로고
    • Ahead of schedule and under budget: The Genome Project passes its fifth birthday
    • Collins, F.S. 1995. Ahead of schedule and under budget: The Genome Project passes its fifth birthday. Proc. Natl. Acad. Sci. 92: 10821-10823.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 10821-10823
    • Collins, F.S.1
  • 11
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: A platform for investigating biology
    • The C. elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282: 2012-2018.
    • (1998) Science , vol.282 , pp. 2012-2018
  • 12
    • 0031800262 scopus 로고    scopus 로고
    • Disruption of murine alpha-enolase by a retroviral gene trap results in early embryonic lethality
    • Couldrey, C., M.B. Carlton, J. Ferrier, W.H. Colledge, and M.J. Evans. 1998. Disruption of murine alpha-enolase by a retroviral gene trap results in early embryonic lethality. Dev. Dyn. 212: 284-292.
    • (1998) Dev. Dyn. , vol.212 , pp. 284-292
    • Couldrey, C.1    Carlton, M.B.2    Ferrier, J.3    Colledge, W.H.4    Evans, M.J.5
  • 13
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi, J.L., V.R. Iyer, and P.O. Brown. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 14
    • 0030218045 scopus 로고    scopus 로고
    • Gene expression in normal and disease states - Identification of therapeutic targets
    • Fannon, M.R. 1996. Gene expression in normal and disease states - identification of therapeutic targets. Trends Biatechnol. 14: 294-298.
    • (1996) Trends Biatechnol. , vol.14 , pp. 294-298
    • Fannon, M.R.1
  • 15
    • 0024406857 scopus 로고
    • A novel genetic system to detect protein-protein interactions
    • Fields, S. and O. Song. 1989. A novel genetic system to detect protein-protein interactions. Nature 340: 245-246.
    • (1989) Nature , vol.340 , pp. 245-246
    • Fields, S.1    Song, O.2
  • 16
    • 0026108692 scopus 로고
    • Light-directed, spatially addressable parallel chemical synthesis
    • Fodor, S.P., J.L. Read, M.C. Pirrung, L. Stryer, A.T. Lu, and D. Solas. 1991. Light-directed, spatially addressable parallel chemical synthesis. Science 251: 767-773.
    • (1991) Science , vol.251 , pp. 767-773
    • Fodor, S.P.1    Read, J.L.2    Pirrung, M.C.3    Stryer, L.4    Lu, A.T.5    Solas, D.6
  • 17
    • 0029926149 scopus 로고    scopus 로고
    • An induction gene trap screen in embryonic stem cells: Identification of genes that respond to retinoic acid in vitro
    • Forrester, L.M., A. Nagy, M. Sam, A. Watt, L. Stevenson, A. Bernstein, A.L. Joyner, and W. Wurst. 1996. An induction gene trap screen in embryonic stem cells: Identification of genes that respond to retinoic acid in vitro. Proc. Natl. Acad. Sci. 93: 1677-1682.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 1677-1682
    • Forrester, L.M.1    Nagy, A.2    Sam, M.3    Watt, A.4    Stevenson, L.5    Bernstein, A.6    Joyner, A.L.7    Wurst, W.8
  • 18
    • 0025992469 scopus 로고
    • Promoter traps in embryonic stem cells: A genetic screen to identify and mutate developmental genes in mice
    • Friedrich, G. and P. Soriano. 1991. Promoter traps in embryonic stem cells: A genetic screen to identify and mutate developmental genes in mice. Genes & Dev. 5: 1513-1523.
    • (1991) Genes & Dev. , vol.5 , pp. 1513-1523
    • Friedrich, G.1    Soriano, P.2
  • 19
    • 0024212067 scopus 로고
    • Rapid production of full-length cDNAs from rare transcripts: Amplification using a single gene-specific oligonucleotide primer
    • Frohman, M.A., M.K. Dush, and G.R. Martin. 1988. Rapid production of full-length cDNAs from rare transcripts: Amplification using a single gene-specific oligonucleotide primer. Proc. Natl. Acad. Sci. 85: 8998-9002.
    • (1988) Proc. Natl. Acad. Sci. , vol.85 , pp. 8998-9002
    • Frohman, M.A.1    Dush, M.K.2    Martin, G.R.3
  • 20
    • 0009427459 scopus 로고    scopus 로고
    • Proteomics: One small step for a digital computer, one giant leap for humankind
    • Geisow, M.J. 1998. Proteomics: One small step for a digital computer, one giant leap for humankind. Nat. Biotechnol. 16: 206.
    • (1998) Nat. Biotechnol. , vol.16 , pp. 206
    • Geisow, M.J.1
  • 21
    • 0031026219 scopus 로고    scopus 로고
    • Selection for retroviral insertions into regulated genes
    • Gogos, J.A., W. Lowry, and M. Karayiorgou. 1997. Selection for retroviral insertions into regulated genes. J. Virol. 71: 1644-1650.
    • (1997) J. Virol. , vol.71 , pp. 1644-1650
    • Gogos, J.A.1    Lowry, W.2    Karayiorgou, M.3
  • 22
    • 0024542052 scopus 로고
    • Mouse embryonic stem cells and reporter constructs to detect developmentally regulated genes
    • Gossler, A., A.L. Joyner, J. Rossant, and W.C. Skarnes. 1989. Mouse embryonic stem cells and reporter constructs to detect developmentally regulated genes. Science 244: 463-465.
    • (1989) Science , vol.244 , pp. 463-465
    • Gossler, A.1    Joyner, A.L.2    Rossant, J.3    Skarnes, W.C.4
  • 24
    • 0025955287 scopus 로고
    • "Promoter trapping" in Caenorhabditis elegans
    • Hope, I.A. 1991. "Promoter trapping" in Caenorhabditis elegans. Development 113: 399-408.
    • (1991) Development , vol.113 , pp. 399-408
    • Hope, I.A.1
  • 26
    • 0030671393 scopus 로고    scopus 로고
    • Genomics: Structural and functional studies of genomes
    • McKusick, V. A. 1997a. Genomics: Structural and functional studies of genomes. Genomics 45: 244-249.
    • (1997) Genomics , vol.45 , pp. 244-249
    • McKusick, V.A.1
  • 28
    • 0018471126 scopus 로고
    • Lethals, steriles and deficiencies in a region of the X chromosome of Caenorhabditis elegans
    • Meneely, P.M. and R.K. Herman. 1979. Lethals, steriles and deficiencies in a region of the X chromosome of Caenorhabditis elegans. Genetics 92: 99-115.
    • (1979) Genetics , vol.92 , pp. 99-115
    • Meneely, P.M.1    Herman, R.K.2
  • 31
    • 0030610646 scopus 로고    scopus 로고
    • Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin
    • Miyawaki, A., J. Llopis, R. Heim, J.M. McCaffery, J.A. Adams, M. Ikura, and R.Y. Tsien. 1997. Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin. Nature 388: 882-887.
    • (1997) Nature , vol.388 , pp. 882-887
    • Miyawaki, A.1    Llopis, J.2    Heim, R.3    McCaffery, J.M.4    Adams, J.A.5    Ikura, M.6    Tsien, R.Y.7
  • 32
    • 0023488840 scopus 로고
    • Detection in situ of genomic regulatory elements in Drosophila
    • O'Kane, C.J. and W.J. Gehring. 1987. Detection in situ of genomic regulatory elements in Drosophila. Proc. Natl. Acad. Sci. 84: 9123-9127.
    • (1987) Proc. Natl. Acad. Sci. , vol.84 , pp. 9123-9127
    • O'Kane, C.J.1    Gehring, W.J.2
  • 33
    • 0031058464 scopus 로고    scopus 로고
    • Complementary DNA sequence (EST) collections and the expression information of the human genome
    • Okubo, K. and K. Matsubara. 1997. Complementary DNA sequence (EST) collections and the expression information of the human genome. FEBS Lett. 403: 225-229.
    • (1997) FEBS Lett. , vol.403 , pp. 225-229
    • Okubo, K.1    Matsubara, K.2
  • 34
    • 0026947554 scopus 로고
    • Large scale cDNA sequencing for analysis of quantitative and qualitative aspects of gene expression
    • Okubo, K., N. Hori, R. Matoba, T. Niiyama, A. Fukushima, Y. Kojima, and K. Matsubara. 1992. Large scale cDNA sequencing for analysis of quantitative and qualitative aspects of gene expression. Nat. Genet. 2: 173-179.
    • (1992) Nat. Genet. , vol.2 , pp. 173-179
    • Okubo, K.1    Hori, N.2    Matoba, R.3    Niiyama, T.4    Fukushima, A.5    Kojima, Y.6    Matsubara, K.7
  • 36
    • 0031734365 scopus 로고    scopus 로고
    • Sampling the universe of gene expression
    • Rao, A. 1998. Sampling the universe of gene expression. Nat. Biotechnol. 16: 1311-1312.
    • (1998) Nat. Biotechnol. , vol.16 , pp. 1311-1312
    • Rao, A.1
  • 37
    • 0025964682 scopus 로고
    • Chemical mutagenesis and fine-structure functional analysis of the mouse genome
    • Rinchik, E.M. 1991. Chemical mutagenesis and fine-structure functional analysis of the mouse genome. Trends Genet. 7: 15-21.
    • (1991) Trends Genet. , vol.7 , pp. 15-21
    • Rinchik, E.M.1
  • 40
    • 0019945644 scopus 로고
    • Genetic transformation of Drosophila with transposable element vectors
    • Rubin, G.M. and A.C. Spradling. 1982. Genetic transformation of Drosophila with transposable element vectors. Science 218: 348-353.
    • (1982) Science , vol.218 , pp. 348-353
    • Rubin, G.M.1    Spradling, A.C.2
  • 41
    • 0031801688 scopus 로고    scopus 로고
    • Efficient poly A trap approach allows the capture of genes specifically active in differentiated embryonic stem cells and in mouse embryos
    • Salminen, M., B.I. Meyer, and P. Gruss. 1998. Efficient poly A trap approach allows the capture of genes specifically active in differentiated embryonic stem cells and in mouse embryos. Dev. Dyn. 212: 326-333.
    • (1998) Dev. Dyn. , vol.212 , pp. 326-333
    • Salminen, M.1    Meyer, B.I.2    Gruss, P.3
  • 42
    • 0000048996 scopus 로고
    • Transgenic plants as tools to study the molecular organization of plant genes
    • Schell, J. 1987. Transgenic plants as tools to study the molecular organization of plant genes. Science 237: 1176-1183.
    • (1987) Science , vol.237 , pp. 1176-1183
    • Schell, J.1
  • 43
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena, M., D. Shalon, R.W. Davis, and P.O. Brown. 1995. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270: 467-470.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 44
    • 0026693090 scopus 로고
    • A gene trap approach in mouse embryonic stem cells: The lacZ reported is activated by splicing, reflects endogenous gene expression, and is mutagenic in mice
    • Skarnes, W.C., B.A. Auerbach, and A.L. Joyner. 1992. A gene trap approach in mouse embryonic stem cells: The lacZ reported is activated by splicing, reflects endogenous gene expression, and is mutagenic in mice. Genes & Dev. 6: 903-918.
    • (1992) Genes & Dev. , vol.6 , pp. 903-918
    • Skarnes, W.C.1    Auerbach, B.A.2    Joyner, A.L.3
  • 45
    • 0029023713 scopus 로고
    • Capturing genes encoding membrane and secreted proteins important for mouse development
    • Skarnes, W.C., J.E. Moss, S.M. Hurtley, and R.S. Beddington. 1995. Capturing genes encoding membrane and secreted proteins important for mouse development. Proc. Natl. Acad. Sci. 92: 6592-6596.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 6592-6596
    • Skarnes, W.C.1    Moss, J.E.2    Hurtley, S.M.3    Beddington, R.S.4
  • 46
    • 0028847033 scopus 로고
    • Gene disruptions using P transposable elements: An integral component of the Drosophila genome project
    • Spradling, A.C., D.M. Stern, I. Kiss, J. Roote, T. Laverty, and G.M. Rubin. 1995. Gene disruptions using P transposable elements: An integral component of the Drosophila genome project. Proc. Natl. Acad. Sci. 92: 10824-10830.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 10824-10830
    • Spradling, A.C.1    Stern, D.M.2    Kiss, I.3    Roote, J.4    Laverty, T.5    Rubin, G.M.6
  • 47
    • 0030947962 scopus 로고    scopus 로고
    • Rapid sequence analysis of gene trap integrations to generate a resource of insertional mutations in mice
    • Townley, D.J., B.J. Avery, B. Rosen, and W.C. Skarnes. 1997. Rapid sequence analysis of gene trap integrations to generate a resource of insertional mutations in mice. Genome Res. 7: 293-298.
    • (1997) Genome Res. , vol.7 , pp. 293-298
    • Townley, D.J.1    Avery, B.J.2    Rosen, B.3    Skarnes, W.C.4
  • 48
    • 0031747715 scopus 로고    scopus 로고
    • Efficiency assessment of the gene trap approach
    • Voss, A.K., T. Thomas, and P. Gruss. 1998. Efficiency assessment of the gene trap approach. Dev. Dyn. 212: 171-180.
    • (1998) Dev. Dyn. , vol.212 , pp. 171-180
    • Voss, A.K.1    Thomas, T.2    Gruss, P.3


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