-
1
-
-
0026049422
-
Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator Xy1R and for integration host factor
-
Abril MA, Buck M, Ramos JL. 1991. Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator Xy1R and for integration host factor. J. Biol. Chem. 266:15832-38
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 15832-15838
-
-
Abril, M.A.1
Buck, M.2
Ramos, J.L.3
-
2
-
-
0025600461
-
Direct visualization of super-coiled DNA molecules in solution
-
Adrian M, ten Heggeler-Bordier B, Wahli W, Stasiak AZ, Stasiak A, Dubochet J. 1990. Direct visualization of super-coiled DNA molecules in solution. EMBO J. 9:4551-54
-
(1990)
EMBO J.
, vol.9
, pp. 4551-4554
-
-
Adrian, M.1
Ten Heggeler-Bordier, B.2
Wahli, W.3
Stasiak, A.Z.4
Stasiak, A.5
Dubochet, J.6
-
3
-
-
0026755519
-
Escherichia coli integration host factor stabilizes bacteriophage Mu repressor interactions with operator DNA in vitro
-
Alazard R, Betemier M, Chandler M. 1992. Escherichia coli integration host factor stabilizes bacteriophage Mu repressor interactions with operator DNA in vitro. Mol. Microbiol. 6:1707-14
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 1707-1714
-
-
Alazard, R.1
Betemier, M.2
Chandler, M.3
-
4
-
-
0029417271
-
A proline-rich TGF-b-responsive transcriptional activator interacts with histone H3
-
Alevizopoulos A, Dusserre Y, Tsai-Pflugfelderm VDWT, Wahli W, Mermod N. 1995. A proline-rich TGF-b-responsive transcriptional activator interacts with histone H3. Genes Dev. 9:3051-66
-
(1995)
Genes Dev.
, vol.9
, pp. 3051-3066
-
-
Alevizopoulos, A.1
Dusserre, Y.2
Tsai-Pflugfelderm, V.D.W.T.3
Wahli, W.4
Mermod, N.5
-
5
-
-
0027083350
-
A novel DNA binding protein with regulatory and protective roles in starved Escherichia coli
-
Almiron M, Link D, Furlong D, Kolter R. 1992. A novel DNA binding protein with regulatory and protective roles in starved Escherichia coli. Genes Dev. 6:2646-54
-
(1992)
Genes Dev.
, vol.6
, pp. 2646-2654
-
-
Almiron, M.1
Link, D.2
Furlong, D.3
Kolter, R.4
-
6
-
-
0029597815
-
The role of the chromatin-associated protein Hbsu in β-mediated DNA recombination is to facilitate the joining of distant recombination sites
-
Alonso JC, Gutierrez C, Rojo F. 1995. The role of the chromatin-associated protein Hbsu in β-mediated DNA recombination is to facilitate the joining of distant recombination sites. Mol. Microbiol. 18:471-78
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 471-478
-
-
Alonso, J.C.1
Gutierrez, C.2
Rojo, F.3
-
7
-
-
0028834152
-
The Bacillus subtilis histone-like protein Hbsu is required for DNA resolution and DNA inversion mediated by the β recombinase of plasmid pSM19035
-
Alonso JC, Weise F, Rojo F. 1995. The Bacillus subtilis histone-like protein Hbsu is required for DNA resolution and DNA inversion mediated by the β recombinase of plasmid pSM19035. J. Biol. Chem. 270:2938-45
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 2938-2945
-
-
Alonso, J.C.1
Weise, F.2
Rojo, F.3
-
8
-
-
0029936379
-
The histone-like protein H-NS acts as a transcriptional repressor for expression of the anaerobic and growth phase activator AppY of Escherichia coli
-
Atlung T, Sund S, Olesen K, Brondsted L. 1996. The histone-like protein H-NS acts as a transcriptional repressor for expression of the anaerobic and growth phase activator AppY of Escherichia coli. J. Bacteriol. 178:3418-25
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3418-3425
-
-
Atlung, T.1
Sund, S.2
Olesen, K.3
Brondsted, L.4
-
9
-
-
0028264349
-
Purification and in vitro activities of the native nitrogen fixation control proteins NifA and NifL
-
Austin S, Buck M, Cannon W, Eydmann T, Dixon R. 1994. Purification and in vitro activities of the native nitrogen fixation control proteins NifA and NifL. J. Bacteriol. 176:3460-65
-
(1994)
J. Bacteriol.
, vol.176
, pp. 3460-3465
-
-
Austin, S.1
Buck, M.2
Cannon, W.3
Eydmann, T.4
Dixon, R.5
-
10
-
-
0028149835
-
Expression of the gene coding for the Escherichia coli Integration Host Factor are controlled by growth phase, rpoS, ppGpp and by autoregulation
-
Aviv M, Giladi H, Schreiber G, Oppenheim AB, Glaser G. 1994. Expression of the gene coding for the Escherichia coli Integration Host Factor are controlled by growth phase, rpoS, ppGpp and by autoregulation. Mol. Microbiol. 14:1021-31
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 1021-1031
-
-
Aviv, M.1
Giladi, H.2
Schreiber, G.3
Oppenheim, A.B.4
Glaser, G.5
-
11
-
-
0026620949
-
Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli
-
Ball C, Osuna R, Ferguson K, Johnson R. 1992. Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli. J. Bacteriol. 174:8043-56
-
(1992)
J. Bacteriol.
, vol.174
, pp. 8043-8056
-
-
Ball, C.1
Osuna, R.2
Ferguson, K.3
Johnson, R.4
-
12
-
-
0029070956
-
The HMG-1 box protein family, classification and functional relationships
-
Baxevanis AD, Landsman D. 1995. The HMG-1 box protein family, classification and functional relationships. Nucleic Acid Res. 23:1604-13
-
(1995)
Nucleic Acid Res.
, vol.23
, pp. 1604-1613
-
-
Baxevanis, A.D.1
Landsman, D.2
-
13
-
-
0026088264
-
The role of the NAC protein in the nitrogen regulation of Klebsiella aerogenes
-
Bender RA. 1991. The role of the NAC protein in the nitrogen regulation of Klebsiella aerogenes. Mol. Microbiol. 5:2575-80
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 2575-2580
-
-
Bender, R.A.1
-
14
-
-
0027958569
-
The isolated catalytic domain of NifA, a bacterial enhancer-binding protein, activates transcription in vitro: Activation is inhibited by NifL
-
Berger DK, Narberhaus F, Kustu S. 1994. The isolated catalytic domain of NifA, a bacterial enhancer-binding protein, activates transcription in vitro: Activation is inhibited by NifL. Proc. Natl. Acad. Sci. USA 91:103-7
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 103-107
-
-
Berger, D.K.1
Narberhaus, F.2
Kustu, S.3
-
15
-
-
0029073722
-
Mutual stabilisation of bacteriophage Mu repressor and histone-like proteins in a nucleoprotein structure
-
Betemier M, Rousseau P, Alazard R, Chandler M. 1995. Mutual stabilisation of bacteriophage Mu repressor and histone-like proteins in a nucleoprotein structure. J. Mol. Biol. 249:332-41
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 332-341
-
-
Betemier, M.1
Rousseau, P.2
Alazard, R.3
Chandler, M.4
-
16
-
-
0028043678
-
Prokaryotic HU and eukaryotic HMG1: A kinked relationship
-
Bianchi ME. 1994. Prokaryotic HU and eukaryotic HMG1: a kinked relationship. Mol. Microbiol. 14:1-5
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 1-5
-
-
Bianchi, M.E.1
-
17
-
-
0023117639
-
Use of site specific recombination as a probe of DNA structure and metabolism in vivo
-
Bliska JB, Cozzarelli NR. 1987. Use of site specific recombination as a probe of DNA structure and metabolism in vivo. J. Mol. Biol. 194:205-18
-
(1987)
J. Mol. Biol.
, vol.194
, pp. 205-218
-
-
Bliska, J.B.1
Cozzarelli, N.R.2
-
19
-
-
0026451648
-
HU, the major histone-like of E. coli, modulates the binding of IHF to oriC
-
Bonnefoy E, Rouviere-Yaniv J. 1992. HU, the major histone-like of E. coli, modulates the binding of IHF to oriC. EMBO J. 11:4489-96
-
(1992)
EMBO J.
, vol.11
, pp. 4489-4496
-
-
Bonnefoy, E.1
Rouviere-Yaniv, J.2
-
20
-
-
0028136642
-
DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA
-
Bonnefoy E, Takahashi M, Rouviere-Yaniv J. 1994. DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA. J. Mol. Biol. 242:116-29
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 116-129
-
-
Bonnefoy, E.1
Takahashi, M.2
Rouviere-Yaniv, J.3
-
21
-
-
0028061282
-
Promoter structure, promoter recognition and transcription activation in prokaryotes
-
Busby S, Ebright R. 1994. Promoter structure, promoter recognition and transcription activation in prokaryotes. Cell 79:743-46
-
(1994)
Cell
, vol.79
, pp. 743-746
-
-
Busby, S.1
Ebright, R.2
-
22
-
-
0030599011
-
54-dependent promoters on linear templates requires intrinsic or induced bending of the DNA
-
54-dependent promoters on linear templates requires intrinsic or induced bending of the DNA. J. Mol. Biol. 261:348-56
-
(1996)
J. Mol. Biol.
, vol.261
, pp. 348-356
-
-
Carmona, M.1
Magasanik, B.2
-
23
-
-
0025971243
-
Role of integration host factor in the regulation of the glnHp2 promoter of Escherichia coli
-
Claverie-Martín F, Magasanik B. 1991. Role of integration host factor in the regulation of the glnHp2 promoter of Escherichia coli. Proc. Natl. Acad. Sci. USA 88:1631-35
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 1631-1635
-
-
Claverie-Martín, F.1
Magasanik, B.2
-
24
-
-
0026450780
-
Positive and negative effects of DNA bending on activation of transcription from a distant site
-
Claverie-Martin F, Magasanik B. 1992. Positive and negative effects of DNA bending on activation of transcription from a distant site. J. Mol. Biol. 227:996-1008
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 996-1008
-
-
Claverie-Martin, F.1
Magasanik, B.2
-
25
-
-
0000154034
-
Architectural elements in nucleoprotein complexes
-
Crothers DM. 1993. Architectural elements in nucleoprotein complexes. Curr. Biol. 3:675-76
-
(1993)
Curr. Biol.
, vol.3
, pp. 675-676
-
-
Crothers, D.M.1
-
27
-
-
0027314211
-
The leucine responsive regulatory protein: More than a regulator?
-
D'Ari R, Lin RT, Newman EB. 1993. The leucine responsive regulatory protein: more than a regulator? Trends Biochem. Sci. 18:260-63
-
(1993)
Trends Biochem. Sci.
, vol.18
, pp. 260-263
-
-
D'Ari, R.1
Lin, R.T.2
Newman, E.B.3
-
30
-
-
0029881189
-
Regulatory noise in prokaryotic promoters: How bacteria learn to respond to novel environmental signals
-
de Lorenzo V, Pérez-Martín J. 1996. Regulatory noise in prokaryotic promoters: How bacteria learn to respond to novel environmental signals. Mol. Microbiol. 19:7-17
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 7-17
-
-
De Lorenzo, V.1
Pérez-Martín, J.2
-
31
-
-
0028847856
-
Cloning and sequence analyses of the genes coding for the integration host factor (IHF) and HU proteins of Pseudomonas aeruginosa
-
Delic-Attree I, Toussaint B, Vignais PM. 1995. Cloning and sequence analyses of the genes coding for the integration host factor (IHF) and HU proteins of Pseudomonas aeruginosa. Gene 154:61-64
-
(1995)
Gene
, vol.154
, pp. 61-64
-
-
Delic-Attree, I.1
Toussaint, B.2
Vignais, P.M.3
-
32
-
-
0025362228
-
Plasmid pLS1-encoded RepA protein regulates transcription from repAB promoter by binding to a DNA sequence containing a 13-bp symmetric element
-
del Solar G, Pérez-Martín J, Espinosa M. 1990. Plasmid pLS1-encoded RepA protein regulates transcription from repAB promoter by binding to a DNA sequence containing a 13-bp symmetric element. J. Biol. Chem. 265:12569-75
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 12569-12575
-
-
Del Solar, G.1
Pérez-Martín, J.2
Espinosa, M.3
-
33
-
-
0027258405
-
Synthesis of the Escherichia coli K12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation
-
Dersch P, Schmidt K, Bremer E. 1993. Synthesis of the Escherichia coli K12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation. Mol. Microbiol. 8:875-89
-
(1993)
Mol. Microbiol.
, vol.8
, pp. 875-889
-
-
Dersch, P.1
Schmidt, K.2
Bremer, E.3
-
34
-
-
0026771503
-
Physical mapping of repetitive extragenic palindromic sequences in Escherichia coli and phylogenetic distribution among Escherichia coli strains and other enteric bacteria
-
Dimri GP, Rudd KE, Morgan MK, Bayat H, Ames GF. 1992. Physical mapping of repetitive extragenic palindromic sequences in Escherichia coli and phylogenetic distribution among Escherichia coli strains and other enteric bacteria. J. Bacteriol. 174:4583-93
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4583-4593
-
-
Dimri, G.P.1
Rudd, K.E.2
Morgan, M.K.3
Bayat, H.4
Ames, G.F.5
-
35
-
-
0028307609
-
Growth phase variation of Integration Host Factor in Escherichia coli
-
Ditto MD, Roberts D, Weisberg RA. 1994. Growth phase variation of Integration Host Factor in Escherichia coli. J. Bacteriol. 176:3738-48
-
(1994)
J. Bacteriol.
, vol.176
, pp. 3738-3748
-
-
Ditto, M.D.1
Roberts, D.2
Weisberg, R.A.3
-
37
-
-
0023181481
-
Sequence-specific positioning of core histones on an 860 base pair DNA
-
Drew HR, Calladine, CR. 1987. Sequence-specific positioning of core histones on an 860 base pair DNA. J. Mol. Biol. 195:143-73
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 143-173
-
-
Drew, H.R.1
Calladine, C.R.2
-
38
-
-
0022432240
-
Structural junctions in DNA: The influence of flanking sequences on nuclease digestion specificities
-
Drew HR, Travers AA. 1985. Structural junctions in DNA: the influence of flanking sequences on nuclease digestion specificities. Nucleic Acids Res. 13:4445-67
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 4445-4467
-
-
Drew, H.R.1
Travers, A.A.2
-
39
-
-
0022053771
-
Negative supercoiling induces spontaneous unwinding of a bacterial promoter
-
Drew HR, Weeks JR, Travers AA. 1985. Negative supercoiling induces spontaneous unwinding of a bacterial promoter. EMBO J. 4:1025-32
-
(1985)
EMBO J.
, vol.4
, pp. 1025-1032
-
-
Drew, H.R.1
Weeks, J.R.2
Travers, A.A.3
-
41
-
-
0027296741
-
Mechanism of transcriptional synergism between distinct virus-inducible enhancer elements
-
Du W, Thanos D, Maniatis T. 1993. Mechanism of transcriptional synergism between distinct virus-inducible enhancer elements. Cell 74:887-98
-
(1993)
Cell
, vol.74
, pp. 887-898
-
-
Du, W.1
Thanos, D.2
Maniatis, T.3
-
42
-
-
0027225271
-
Transcription activation at Class 1 CAP-dependent promoters
-
Ebright RH. 1993. Transcription activation at Class 1 CAP-dependent promoters. Mol. Microbiol. 8:797-802
-
(1993)
Mol. Microbiol.
, vol.8
, pp. 797-802
-
-
Ebright, R.H.1
-
43
-
-
0022501136
-
Multiple DNA-protein interactions governing high-precision DNA transactions
-
Echols, H. 1986. Multiple DNA-protein interactions governing high-precision DNA transactions. Science 233:1050-56
-
(1986)
Science
, vol.233
, pp. 1050-1056
-
-
Echols, H.1
-
44
-
-
0024263822
-
The formation and function of DNase 1 hypersensitive sites in the process of gene activation
-
Elgin SC. 1988. The formation and function of DNase 1 hypersensitive sites in the process of gene activation. J. Biol. Chem. 263:19259-62
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 19259-19262
-
-
Elgin, S.C.1
-
45
-
-
0028631162
-
DNA bending by Cro protein in specific and nonspecific complexes: Implications for protein site recognition and specificity
-
Erie DA, Yang G, Schultz HC, Bustamante C. 1994. DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity. Science 266: 1562-66
-
(1994)
Science
, vol.266
, pp. 1562-1566
-
-
Erie, D.A.1
Yang, G.2
Schultz, H.C.3
Bustamante, C.4
-
46
-
-
0027429067
-
Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional auto-repression
-
Falconi M, Higgins NP, Spurio R, Pon CL, Gualerzi CO. 1993. Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional auto-repression. Mol. Microbiol. 10:273-82
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 273-282
-
-
Falconi, M.1
Higgins, N.P.2
Spurio, R.3
Pon, C.L.4
Gualerzi, C.O.5
-
47
-
-
0029591914
-
Activation of transcription initiation from the nac promoter of Klebsiella aerogenes
-
Feng J, Goss TJ, Bender RA, Ninfa AJ. 1995. Activation of transcription initiation from the nac promoter of Klebsiella aerogenes. J. Bacteriol. 177:5523-34
-
(1995)
J. Bacteriol.
, vol.177
, pp. 5523-5534
-
-
Feng, J.1
Goss, T.J.2
Bender, R.A.3
Ninfa, A.J.4
-
49
-
-
0005892893
-
Specificity and promiscuity of catabolic promoters of Pseudomonas spp.
-
ed. T Nakazawa, K Furukawa, D Haas, S Silver, Washington: Am. Soc. Microbiol.
-
Fernández S, Pérez-Martín J, de Lorenzo V. 1996. Specificity and promiscuity of catabolic promoters of Pseudomonas spp. In Molecular Biology of Pseudomonas, ed. T Nakazawa, K Furukawa, D Haas, S Silver, pp. 165-75. Washington: Am. Soc. Microbiol.
-
(1996)
Molecular Biology of Pseudomonas
, pp. 165-175
-
-
Fernández, S.1
Pérez-Martín, J.2
De Lorenzo, V.3
-
50
-
-
0026470852
-
The Fis protein: It's not just for DNA inversion anymore
-
Finkel SE, Johnson RC. 1992. The Fis protein: it's not just for DNA inversion anymore. Mol. Microbiol. 6:3257-65
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 3257-3265
-
-
Finkel, S.E.1
Johnson, R.C.2
-
51
-
-
0027432149
-
Interactions of NodD at the nod box: NodD binds to two distinct sites on the same face of the helix and induces a bend in the DNA
-
Fisher RF, Long SR. 1993. Interactions of NodD at the nod box: NodD binds to two distinct sites on the same face of the helix and induces a bend in the DNA. J. Mol. Biol. 233:336-48
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 336-348
-
-
Fisher, R.F.1
Long, S.R.2
-
52
-
-
0023724433
-
DNA dynamic flexibility and protein recognition: Differential stimulation by bacterial histone-like protein HU
-
Flashner Y, Gralla JD. 1988. DNA dynamic flexibility and protein recognition: differential stimulation by bacterial histone-like protein HU. Cell 54:713-721
-
(1988)
Cell
, vol.54
, pp. 713-721
-
-
Flashner, Y.1
Gralla, J.D.2
-
53
-
-
0024291348
-
Integration Host Factor: A protein for all reasons
-
Friedman, DI. 1988. Integration Host Factor: a protein for all reasons. Cell 55:545-54
-
(1988)
Cell
, vol.55
, pp. 545-554
-
-
Friedman, D.I.1
-
54
-
-
0028361419
-
Localization of the intrinsically bent DNA region upstream of the E. coli rrnB Pl promoter
-
Gaal T, Rao L, Estrem ST, Yang J, Wartell RM, Gourse RL. 1994. Localization of the intrinsically bent DNA region upstream of the E. coli rrnB Pl promoter. Nucleic Acids Res. 22:2344-50
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2344-2350
-
-
Gaal, T.1
Rao, L.2
Estrem, S.T.3
Yang, J.4
Wartell, R.M.5
Gourse, R.L.6
-
55
-
-
0026635872
-
Stabilization of bacteriophage Mu repressor-operator complexes by the Escherichia coli integration host factor protein
-
Gama MJ, Toussaint A, Higgins NP. 1992. Stabilization of bacteriophage Mu repressor-operator complexes by the Escherichia coli integration host factor protein. Mol. Microbiol. 6:1715-22
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 1715-1722
-
-
Gama, M.J.1
Toussaint, A.2
Higgins, N.P.3
-
56
-
-
0024300174
-
DNA sequence determinants of CAP-induced bending and protein affinity
-
Gartenberg MR, Crothers DM. 1988. DNA sequence determinants of CAP-induced bending and protein affinity. Nature 333:824-29
-
(1988)
Nature
, vol.333
, pp. 824-829
-
-
Gartenberg, M.R.1
Crothers, D.M.2
-
57
-
-
0026000281
-
The cyclic AMP (cAMP)-receptor protein functions both as an activator and as a corepressor at the tsx-P2 promoter of Escherichia coli K12
-
Gerlach P, Søgaard-Andersen L, Pedersen H, Martinussen J, Valentin-Hansen P, et al. 1991. The cyclic AMP (cAMP)-receptor protein functions both as an activator and as a corepressor at the tsx-P2 promoter of Escherichia coli K12. J. Bacteriol. 173:5419-30
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5419-5430
-
-
Gerlach, P.1
Søgaard-Andersen, L.2
Pedersen, H.3
Martinussen, J.4
Valentin-Hansen, P.5
-
58
-
-
0026643104
-
The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures
-
Giese K, Cox J, Grosschedl R. 1992. The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures. Cell 69:185-95
-
(1992)
Cell
, vol.69
, pp. 185-195
-
-
Giese, K.1
Cox, J.2
Grosschedl, R.3
-
59
-
-
0027440761
-
LEF-1 contains an activation domain that stimulates transcription only in a specific context of factor-binding sites
-
Giese K, Grosschedl R. 1993. LEF-1 contains an activation domain that stimulates transcription only in a specific context of factor-binding sites. EMBO J. 12:4667-76
-
(1993)
EMBO J.
, vol.12
, pp. 4667-4676
-
-
Giese, K.1
Grosschedl, R.2
-
60
-
-
0028986250
-
Assembly and function of a TCRa enhancer complex is dependent on LEF-1-induced DNA bending and multiple protein-protein interactions
-
Giese K, Kingsley C, Kirshner JR, Grosschedl R. 1995. Assembly and function of a TCRa enhancer complex is dependent on LEF-1-induced DNA bending and multiple protein-protein interactions. Genes Dev. 9:995-1008
-
(1995)
Genes Dev.
, vol.9
, pp. 995-1008
-
-
Giese, K.1
Kingsley, C.2
Kirshner, J.R.3
Grosschedl, R.4
-
62
-
-
0025728069
-
Palindromic units are part of a new bacterial interspersed mosaic element (BIME)
-
Gilson E, Saurin W, Perrin D, Bachellier S, Hofnung M. 1991. Palindromic units are part of a new bacterial interspersed mosaic element (BIME). Nucleic Acids Res. 19:1375-83
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 1375-1383
-
-
Gilson, E.1
Saurin, W.2
Perrin, D.3
Bachellier, S.4
Hofnung, M.5
-
63
-
-
0025171151
-
Integration Host Factor is required for the activation of developmentally regulated genes in Caulobacter
-
Gober JW, Shapiro L. 1990. Integration Host Factor is required for the activation of developmentally regulated genes in Caulobacter. Genes Dev. 4:1494-504
-
(1990)
Genes Dev.
, vol.4
, pp. 1494-1504
-
-
Gober, J.W.1
Shapiro, L.2
-
64
-
-
0028575869
-
Genetic and biochemical analysis of IHF/HU hybrid proteins
-
Goldenberg D, Giladi H, Oppenheim AB. 1994. Genetic and biochemical analysis of IHF/HU hybrid proteins. Biochimie 76:941-50
-
(1994)
Biochimie
, vol.76
, pp. 941-950
-
-
Goldenberg, D.1
Giladi, H.2
Oppenheim, A.B.3
-
65
-
-
0028004389
-
Analysis of DNA bend structure of promoter regulatory regions of xylene-metabolizing genes on the Pseudomonas TOL plasmid
-
Gomada M, Imaidhi H, Miura K, Inouye S, Nakazawa T, Nakazawa A. 1994. Analysis of DNA bend structure of promoter regulatory regions of xylene-metabolizing genes on the Pseudomonas TOL plasmid. J. Biochem. 116:1096-104
-
(1994)
J. Biochem.
, vol.116
, pp. 1096-1104
-
-
Gomada, M.1
Imaidhi, H.2
Miura, K.3
Inouye, S.4
Nakazawa, T.5
Nakazawa, A.6
-
66
-
-
0024424261
-
Functional replacement of protein-induced bend in a DNA recombination site
-
Goodman S, Nash HA. 1989. Functional replacement of protein-induced bend in a DNA recombination site. Nature 341:251-54
-
(1989)
Nature
, vol.341
, pp. 251-254
-
-
Goodman, S.1
Nash, H.A.2
-
67
-
-
0027049067
-
Deformation of DNA during site-specific recombination of bacteriophage lambda: Replacement of IHF by HU protein or sequence directed bends
-
Goodman S, Nicholson SC, Nash HA. 1992. Deformation of DNA during site-specific recombination of bacteriophage lambda: replacement of IHF by HU protein or sequence directed bends. Proc. Natl. Acad. Sci. USA 89:11910-14
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 11910-11914
-
-
Goodman, S.1
Nicholson, S.C.2
Nash, H.A.3
-
68
-
-
0002540203
-
Regulation of transcription
-
ed. N Symonds, A Toussaint, P van de Putte, MM Howe, Cold Spring Harbor: Cold Spring Harbor Lab.
-
Goosen N, van de Putten P. 1987. Regulation of transcription. In Phage Mu, ed. N Symonds, A Toussaint, P van de Putte, MM Howe, pp. 41-52. Cold Spring Harbor: Cold Spring Harbor Lab.
-
(1987)
Phage Mu
, pp. 41-52
-
-
Goosen, N.1
Van De Putten, P.2
-
69
-
-
0028922082
-
The regulation of transcription initiation by integration host factor
-
Goosen N, van de Putte P. 1995. The regulation of transcription initiation by integration host factor. Mol. Microbiol. 16:1-7
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 1-7
-
-
Goosen, N.1
Van De Putte, P.2
-
70
-
-
0026658266
-
Chimeric HU-IHF proteins that alter DNA binding ability
-
Goshima N, Inagaki Y, Otaki H, Tanaka H, Hayashi N, Imamoto F, Kano Y. 1992. Chimeric HU-IHF proteins that alter DNA binding ability. Gene 118:97-102
-
(1992)
Gene
, vol.118
, pp. 97-102
-
-
Goshima, N.1
Inagaki, Y.2
Otaki, H.3
Tanaka, H.4
Hayashi, N.5
Imamoto, F.6
Kano, Y.7
-
71
-
-
0027526353
-
DNA binding and bending are necessary but not sufficient for Fis-dependent activation of rrnB Pl
-
Gosink KK, Ross W, Leirmo S, Osuna R, Finkel SE, et al. 1993. DNA binding and bending are necessary but not sufficient for Fis-dependent activation of rrnB Pl. J. Bacteriol. 175:1580-89
-
(1993)
J. Bacteriol.
, vol.175
, pp. 1580-1589
-
-
Gosink, K.K.1
Ross, W.2
Leirmo, S.3
Osuna, R.4
Finkel, S.E.5
-
72
-
-
0022065259
-
Site-specific binding by a bacteriophage SPO1-encoded type II DNA-binding protein
-
Green JR, Geiduscheck EP. 1985. Site-specific binding by a bacteriophage SPO1-encoded type II DNA-binding protein. EMBO J. 4:1345-49
-
(1985)
EMBO J.
, vol.4
, pp. 1345-1349
-
-
Green, J.R.1
Geiduscheck, E.P.2
-
73
-
-
0029060412
-
Higher-order nucleoprotein complexes in transcription: Analogies with site-specific recombination
-
Grosschedl R. 1995. Higher-order nucleoprotein complexes in transcription: analogies with site-specific recombination. Curr. Opin. Cell Biol. 7:362-70
-
(1995)
Curr. Opin. Cell Biol.
, vol.7
, pp. 362-370
-
-
Grosschedl, R.1
-
74
-
-
0028197368
-
HMG domain proteins: Architectural elements in the assembly of nucleoprotein structures
-
Grosschedl R, Giese K, Pagel J. 1994. HMG domain proteins: architectural elements in the assembly of nucleoprotein structures. Trends Genet. 10:94-100
-
(1994)
Trends Genet.
, vol.10
, pp. 94-100
-
-
Grosschedl, R.1
Giese, K.2
Pagel, J.3
-
75
-
-
0025312950
-
Sequence-directed curvature of DNA
-
Hagerman PJ. 1990. Sequence-directed curvature of DNA. Annu. Rev. Biochem. 59:755-81
-
(1990)
Annu. Rev. Biochem.
, vol.59
, pp. 755-781
-
-
Hagerman, P.J.1
-
76
-
-
0028073817
-
Sequence elements responsible for DNA curvature
-
Haran TE, Kahn JD, Crothers DM. 1994. Sequence elements responsible for DNA curvature. J. Mol. Biol. 244:135-43
-
(1994)
J. Mol. Biol.
, vol.244
, pp. 135-143
-
-
Haran, T.E.1
Kahn, J.D.2
Crothers, D.M.3
-
77
-
-
0026686973
-
DNA curving and bending in protein-DNA recognition
-
Harrington RE. 1992. DNA curving and bending in protein-DNA recognition. Mol. Microbiol. 6:2549-55
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2549-2555
-
-
Harrington, R.E.1
-
78
-
-
0011215998
-
Enhancers and other cis-acting sequences
-
ed. BD Hames, DM Glover, Washington, DC: IRL
-
Hatzopoulos AK, Schlokat U, Gruss P. 1988. Enhancers and other cis-acting sequences. In Transcription and Splicing, ed. BD Hames, DM Glover, pp. 43-96. Washington, DC: IRL
-
(1988)
Transcription and Splicing
, pp. 43-96
-
-
Hatzopoulos, A.K.1
Schlokat, U.2
Gruss, P.3
-
80
-
-
0021613740
-
Regulation of the Escherichia coli L-arabinose operon studied by gel electrophoresis DNA binding assay
-
Hendrickson W, Schleif R. 1984. Regulation of the Escherichia coli L-arabinose operon studied by gel electrophoresis DNA binding assay. J. Mol. Biol. 174:611-28
-
(1984)
J. Mol. Biol.
, vol.174
, pp. 611-628
-
-
Hendrickson, W.1
Schleif, R.2
-
81
-
-
0025630517
-
Protein H1: A role for chromatin structure in the regulation of bacterial gene expression and virulence?
-
Higgins CF, Hinton JCD, Hulton CSJ, Owen-Hughes T, Pavitt GD, et al. 1990. Protein H1: a role for chromatin structure in the regulation of bacterial gene expression and virulence? Mol. Microbiol. 4:2007-12
-
(1990)
Mol. Microbiol.
, vol.4
, pp. 2007-2012
-
-
Higgins, C.F.1
Hinton, J.C.D.2
Hulton, C.S.J.3
Owen-Hughes, T.4
Pavitt, G.D.5
-
82
-
-
0029863159
-
Surveying a supercoil domain by using the γδ resolution system in Salmonella typhimurium
-
Higgins NP, Yang X, Fu Q, Roth JR. 1996. Surveying a supercoil domain by using the γδ resolution system in Salmonella typhimurium. J. Bacteriol. 178:2825-35
-
(1996)
J. Bacteriol.
, vol.178
, pp. 2825-2835
-
-
Higgins, N.P.1
Yang, X.2
Fu, Q.3
Roth, J.R.4
-
84
-
-
0025012093
-
Integration Host factor stimulates interaction of RNA polymerase with NifA, the transcriptional activator for nitrogen fixation operons
-
Hoover TR, Santero E, Porter S, Kustu S. 1990. Integration Host factor stimulates interaction of RNA polymerase with NifA, the transcriptional activator for nitrogen fixation operons. Cell 63:11-22
-
(1990)
Cell
, vol.63
, pp. 11-22
-
-
Hoover, T.R.1
Santero, E.2
Porter, S.3
Kustu, S.4
-
85
-
-
0025135253
-
Histone-like protein H1 (H-NS), DNA supercoiling and gene expression in bacteria
-
Hulton CSJ, Seirafi A, Hinton JCD, Sidebotham JM, Wadel L, et al. 1990. Histone-like protein H1 (H-NS), DNA supercoiling and gene expression in bacteria. Cell 63:631-42
-
(1990)
Cell
, vol.63
, pp. 631-642
-
-
Hulton, C.S.J.1
Seirafi, A.2
Hinton, J.C.D.3
Sidebotham, J.M.4
Wadel, L.5
-
86
-
-
0017349150
-
Specificity of the weak binding between the phage SPO1 transcription-inhibitory protein, TF1 and SPO1 DNA
-
Johnson GG, Geiduscheck EP. 1977. Specificity of the weak binding between the phage SPO1 transcription-inhibitory protein, TF1 and SPO1 DNA. Biochemistry 16:1473-85
-
(1977)
Biochemistry
, vol.16
, pp. 1473-1485
-
-
Johnson, G.G.1
Geiduscheck, E.P.2
-
87
-
-
0028598318
-
Regions of the CFA/I promoter involved in the activation by the transcriptional activator CfaD and repression by the histone-like protein H-NS
-
Jordi BJ, van der Zeijst BA, Gaastra W. 1994. Regions of the CFA/I promoter involved in the activation by the transcriptional activator CfaD and repression by the histone-like protein H-NS. Biochimie 76:1052-54
-
(1994)
Biochimie
, vol.76
, pp. 1052-1054
-
-
Jordi, B.J.1
Van Der Zeijst, B.A.2
Gaastra, W.3
-
90
-
-
0028289189
-
Detection of localized DNA flexibility
-
Kahn JD, Yun E, Crothers DM. 1994. Detection of localized DNA flexibility. Nature 368:163-66
-
(1994)
Nature
, vol.368
, pp. 163-166
-
-
Kahn, J.D.1
Yun, E.2
Crothers, D.M.3
-
91
-
-
0021952570
-
G inversion in bacteriophage Mu DNA is stimulated by a site within the invertase gene and a host factor
-
Kahmann R, Rudt F, Koch C, Mertens G. 1985. G inversion in bacteriophage Mu DNA is stimulated by a site within the invertase gene and a host factor. Cell 41:771-80
-
(1985)
Cell
, vol.41
, pp. 771-780
-
-
Kahmann, R.1
Rudt, F.2
Koch, C.3
Mertens, G.4
-
92
-
-
0027236999
-
Transcriptional regulation by cAMP and its receptor protein
-
Kolb A, Busby S, Buc H, Garges S, Adhya S. 1993. Transcriptional regulation by cAMP and its receptor protein. Annu. Rev. Biochem. 62:749-95
-
(1993)
Annu. Rev. Biochem.
, vol.62
, pp. 749-795
-
-
Kolb, A.1
Busby, S.2
Buc, H.3
Garges, S.4
Adhya, S.5
-
93
-
-
0022477409
-
DNA bending at adenine/thymine tracts
-
Koo HS, Wu HM, Crothers DM. 1986. DNA bending at adenine/thymine tracts. Nature 320:501-6
-
(1986)
Nature
, vol.320
, pp. 501-506
-
-
Koo, H.S.1
Wu, H.M.2
Crothers, D.M.3
-
94
-
-
0023013617
-
Positive and negative regulation of the Mu operator by Mu repressor and Escherichia coli integration host factor
-
Krause HM, Higgins NP. 1986. Positive and negative regulation of the Mu operator by Mu repressor and Escherichia coli integration host factor. J. Biol. Chem. 261:3744-52
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 3744-3752
-
-
Krause, H.M.1
Higgins, N.P.2
-
95
-
-
0024456611
-
RNA polymerase and gal repressor bind simultaneously and with DNA bending to the control region of Escherichia coli galactose operon
-
Kuhnke GC, Theres C, Fritz KJ, Ehring R. 1989. RNA polymerase and gal repressor bind simultaneously and with DNA bending to the control region of Escherichia coli galactose operon. EMBO J. 6:1247-55
-
(1989)
EMBO J.
, vol.6
, pp. 1247-1255
-
-
Kuhnke, G.C.1
Theres, C.2
Fritz, K.J.3
Ehring, R.4
-
96
-
-
0024550459
-
Repression of transcription from the b2-att region of the coliphage lambda by integration host factor
-
Kur J, Hasan N, Szybalski W. 1989. Repression of transcription from the b2-att region of the coliphage lambda by integration host factor. Virology 168:236-44
-
(1989)
Virology
, vol.168
, pp. 236-244
-
-
Kur, J.1
Hasan, N.2
Szybalski, W.3
-
97
-
-
0025938894
-
Prokaryotic transcriptional enhancers and enhancer-binding proteins
-
Kustu S, North AK, Weiss DS. 1991. Prokaryotic transcriptional enhancers and enhancer-binding proteins. Trends Biochem. Sci. 16:397-402
-
(1991)
Trends Biochem. Sci.
, vol.16
, pp. 397-402
-
-
Kustu, S.1
North, A.K.2
Weiss, D.S.3
-
100
-
-
0024297575
-
Curved helix segments can uniquely orient the topology of supertwisted DNA
-
Laundon CH, Griffith JD. 1988. Curved helix segments can uniquely orient the topology of supertwisted DNA. Cell 52:545-49
-
(1988)
Cell
, vol.52
, pp. 545-549
-
-
Laundon, C.H.1
Griffith, J.D.2
-
101
-
-
0028143614
-
CRP fixes the rotational orientation of covalently closed DNA molecules
-
Lavigne M, Kolb A, Yeramian E, Buc H. 1994. CRP fixes the rotational orientation of covalently closed DNA molecules. EMBO J. 13:4983-90
-
(1994)
EMBO J.
, vol.13
, pp. 4983-4990
-
-
Lavigne, M.1
Kolb, A.2
Yeramian, E.3
Buc, H.4
-
102
-
-
0027729660
-
Site-specific HU binding in the Mu transpososome: Conversion of a sequence-independent DNA binding protein into a chemical nuclease
-
Lavoie BD, Chaconas G. 1993. Site-specific HU binding in the Mu transpososome: conversion of a sequence-independent DNA binding protein into a chemical nuclease. Genes Dev. 7:2510-19
-
(1993)
Genes Dev.
, vol.7
, pp. 2510-2519
-
-
Lavoie, B.D.1
Chaconas, G.2
-
103
-
-
0027251477
-
The Escherichia coli Fis protein is not required for the activation of tyrT transcription on entry into exponential growth
-
Lazarus LR, Travers AA. 1993. The Escherichia coli Fis protein is not required for the activation of tyrT transcription on entry into exponential growth. EMBO J. 12:2483-94
-
(1993)
EMBO J.
, vol.12
, pp. 2483-2494
-
-
Lazarus, L.R.1
Travers, A.A.2
-
104
-
-
0022885153
-
The DNA binding domain and bending angle of E. coli CAP protein
-
Liu-Johnson HN, Gartenberg MR, Crothers DM. 1986. The DNA binding domain and bending angle of E. coli CAP protein. Cell 47:995-1005
-
(1986)
Cell
, vol.47
, pp. 995-1005
-
-
Liu-Johnson, H.N.1
Gartenberg, M.R.2
Crothers, D.M.3
-
105
-
-
0025202249
-
DNA looping and unlooping by AraC protein
-
Lobell RB, Schleif R. 1990. DNA looping and unlooping by AraC protein. Science 250:528-32
-
(1990)
Science
, vol.250
, pp. 528-532
-
-
Lobell, R.B.1
Schleif, R.2
-
106
-
-
0026092358
-
AraC-DNA looping: Orientation and distance dependent loop breaking by cyclic AMP receptor protein
-
Lobell RB, Schleif R. 1991. AraC-DNA looping: orientation and distance dependent loop breaking by cyclic AMP receptor protein. J. Mol. Biol. 218:45-54
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 45-54
-
-
Lobell, R.B.1
Schleif, R.2
-
107
-
-
0026710382
-
Short interspersed repetitive DNA sequences in prokaryotic genomes
-
Lupski JR, Weinstock GM. 1992. Short interspersed repetitive DNA sequences in prokaryotic genomes. J. Bacteriol. 174:4525-29
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4525-4529
-
-
Lupski, J.R.1
Weinstock, G.M.2
-
108
-
-
0029991026
-
Histone-like protein HU and bacterial DNA topology: Suppression of an HU deficiency by gyrase mutations
-
Malik M, Bensaid A, Rouviere-Yaniv J, Drlica K. 1996. Histone-like protein HU and bacterial DNA topology: suppression of an HU deficiency by gyrase mutations. J. Mol. Biol. 256:6-76
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 6-76
-
-
Malik, M.1
Bensaid, A.2
Rouviere-Yaniv, J.3
Drlica, K.4
-
110
-
-
0028859554
-
Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon
-
Martin-Vestraete I, Stulke J, Klier A, Rapoport G. 1995. Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon. J. Bacteriol. 177:6919-27
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6919-6927
-
-
Martin-Vestraete, I.1
Stulke, J.2
Klier, A.3
Rapoport, G.4
-
111
-
-
0028559938
-
The mitochondrial histone HM: An evolutionary link between bacterial HU and nuclear HMG1 proteins
-
Megraw TL, Kao LR, Chae CB. 1994. The mitochondrial histone HM: an evolutionary link between bacterial HU and nuclear HMG1 proteins. Biochimie 76:909-16
-
(1994)
Biochimie
, vol.76
, pp. 909-916
-
-
Megraw, T.L.1
Kao, L.R.2
Chae, C.B.3
-
112
-
-
0027488753
-
Residues of the Bacillus subtilis phage Φ29 transcriptional activator required both to interact with RNA polymerase and to activate transcription
-
Mencia M, Salas M, Rojo F. 1993. Residues of the Bacillus subtilis phage Φ29 transcriptional activator required both to interact with RNA polymerase and to activate transcription. J. Mol. Biol. 233:695-704
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 695-704
-
-
Mencia, M.1
Salas, M.2
Rojo, F.3
-
113
-
-
0028946510
-
Transcription activation at the Escherichia coli uhpT promoter by the catabolite gene activator protein
-
Merkel TJ, Dahl JL, Ebright RH, Kadner RJ. 1995. Transcription activation at the Escherichia coli uhpT promoter by the catabolite gene activator protein. J. Bacteriol. 177:1712-18
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1712-1718
-
-
Merkel, T.J.1
Dahl, J.L.2
Ebright, R.H.3
Kadner, R.J.4
-
114
-
-
0027367175
-
Chromosomal supercoiling in Escherichia coli
-
Miller WG, Simons RW. 1993. Chromosomal supercoiling in Escherichia coli. Mol. Microbiol. 10:675-84
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 675-684
-
-
Miller, W.G.1
Simons, R.W.2
-
116
-
-
0025118536
-
Transcriptional enhancers can act in trans
-
Muller HP, Schaffner W. 1990. Transcriptional enhancers can act in trans. Trends Genet. 6:300-4
-
(1990)
Trends Genet.
, vol.6
, pp. 300-304
-
-
Muller, H.P.1
Schaffner, W.2
-
117
-
-
0002480960
-
The HU and IHF proteins: Accessory factors in complex protein-DNA assemblies
-
ed. ECC Lin, A Simon Lyn, Austin: RG Landes
-
Nash HA. 1996. The HU and IHF proteins: accessory factors in complex protein-DNA assemblies. In Regulation of Gene Expression in Escherichia coli, ed. ECC Lin, A Simon Lyn, pp. 149-79. Austin: RG Landes
-
(1996)
Regulation of Gene Expression in Escherichia Coli
, pp. 149-179
-
-
Nash, H.A.1
-
118
-
-
0027714828
-
DNA bending and orientation dependent function of YY1 in the c-fos promoter
-
Natesan S, Gilman MZ. 1993. DNA bending and orientation dependent function of YY1 in the c-fos promoter. Genes Dev. 7:2497-509
-
(1993)
Genes Dev.
, vol.7
, pp. 2497-2509
-
-
Natesan, S.1
Gilman, M.Z.2
-
120
-
-
0029901860
-
High mobility group I(Y)-like DNA binding domains on a bacterial transcription factor
-
Nicolas FJ, Cayela ML, Martinez-Argudo IM, Ruiz-Vazquez RM, Murillo FJ. 1996. High mobility group I(Y)-like DNA binding domains on a bacterial transcription factor. Proc. Natl. Acad. Sci. USA 93:6881-85
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 6881-6885
-
-
Nicolas, F.J.1
Cayela, M.L.2
Martinez-Argudo, I.M.3
Ruiz-Vazquez, R.M.4
Murillo, F.J.5
-
121
-
-
0026698904
-
Integration Host Factor facilitates repression of the put operon in Salmonella typhimurium
-
O'Brien K, Deno G, Otrovsky de Spicer P, Gardner JF, Maloy SR. 1992. Integration Host Factor facilitates repression of the put operon in Salmonella typhimurium. Gene 118:13-19
-
(1992)
Gene
, vol.118
, pp. 13-19
-
-
O'Brien, K.1
Deno, G.2
Otrovsky De Spicer, P.3
Gardner, J.F.4
Maloy, S.R.5
-
122
-
-
0027475041
-
The RpoS sigma factor relieves H-NS-mediated transcriptional expression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli
-
Olsen A, Arnqvist A, Hammar M, Sukupolvi S, Normark S. 1993. The RpoS sigma factor relieves H-NS-mediated transcriptional expression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli. Mol. Microbiol. 7:523-36
-
(1993)
Mol. Microbiol.
, vol.7
, pp. 523-536
-
-
Olsen, A.1
Arnqvist, A.2
Hammar, M.3
Sukupolvi, S.4
Normark, S.5
-
123
-
-
0028429566
-
The DNA-bending protein HMG-1 enhances progesterone receptor binding to its target DNA sequences
-
Onate SA, Prendergast P, Wagner JP, Nissen M, Reeves R, et al. 1994. The DNA-bending protein HMG-1 enhances progesterone receptor binding to its target DNA sequences. Mol. Cell Biol. 14:3376-91
-
(1994)
Mol. Cell Biol.
, vol.14
, pp. 3376-3391
-
-
Onate, S.A.1
Prendergast, P.2
Wagner, J.P.3
Nissen, M.4
Reeves, R.5
-
124
-
-
0027426254
-
Integration host factor binds to an unique class of complex repetitive extragenic DNA sequences in Escherichia coli
-
Oppenheim AB, Rudd KE, Mendelson I, Teff D. 1993. Integration host factor binds to an unique class of complex repetitive extragenic DNA sequences in Escherichia coli. Mol. Microbiol. 10:113-22
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 113-122
-
-
Oppenheim, A.B.1
Rudd, K.E.2
Mendelson, I.3
Teff, D.4
-
125
-
-
0028977927
-
Regulation of lrp expression by H-NS and Lrp proteins in Escherichia coli: Dominant negative mutations in lrp
-
Oshima T, Ito K, Kabauama H, Nakamura Y. 1995. Regulation of lrp expression by H-NS and Lrp proteins in Escherichia coli: dominant negative mutations in lrp. Mol. Gen. Genet. 247:521-28
-
(1995)
Mol. Gen. Genet.
, vol.247
, pp. 521-528
-
-
Oshima, T.1
Ito, K.2
Kabauama, H.3
Nakamura, Y.4
-
126
-
-
0028070461
-
Roles of catabolite activator protein sites centered at -81.5 and -41.5 in the activation of the Klebsiella aerogenes histidine utilization operon hutUH
-
Osuna R, Janes BK, Bender RA. 1994. Roles of catabolite activator protein sites centered at -81.5 and -41.5 in the activation of the Klebsiella aerogenes histidine utilization operon hutUH. J. Bacteriol. 176:5513-24
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5513-5524
-
-
Osuna, R.1
Janes, B.K.2
Bender, R.A.3
-
127
-
-
0024294634
-
Crystal structure of trp repressor/operator complex at atomic resolution
-
Otwinowski Z, Schevitz RW, Zhang RG, Lawson CL, Joachimiak A, et al. 1988. Crystal structure of trp repressor/operator complex at atomic resolution. Nature 355:321-29
-
(1988)
Nature
, vol.355
, pp. 321-329
-
-
Otwinowski, Z.1
Schevitz, R.W.2
Zhang, R.G.3
Lawson, C.L.4
Joachimiak, A.5
-
128
-
-
0026548087
-
DNA topology-mediated regulation of transcription initiation from tandem promoters of the ilvGMEDA operon of Escherichia coli
-
Pagel JM, Winkelman JW, Adams CW, Hatfield GW. 1992. DNA topology-mediated regulation of transcription initiation from tandem promoters of the ilvGMEDA operon of Escherichia coli. J. Mol. Biol. 224:919-35
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 919-935
-
-
Pagel, J.M.1
Winkelman, J.W.2
Adams, C.W.3
Hatfield, G.W.4
-
130
-
-
0030052931
-
Transcriptional activation by protein-induced DNA bending: Evidence for a DNA structural transmission model
-
Parekh BS, Hatfield GW. 1996. Transcriptional activation by protein-induced DNA bending: evidence for a DNA structural transmission model. Proc. Natl. Acad. Sci. USA 93:1173-77
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 1173-1177
-
-
Parekh, B.S.1
Hatfield, G.W.2
-
131
-
-
0028919503
-
Pre-bending of a promoter sequence enhances affinity for the TATA-binding factor
-
Parvin JA, McCormick RJ, Sharp PA, Fisher DE. 1995. Pre-bending of a promoter sequence enhances affinity for the TATA-binding factor. Nature 373:724-27
-
(1995)
Nature
, vol.373
, pp. 724-727
-
-
Parvin, J.A.1
McCormick, R.J.2
Sharp, P.A.3
Fisher, D.E.4
-
132
-
-
0027216519
-
The nonspecific DNA binding and bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures
-
Paull TT, Haykinson MJ, Johnson R. 1993. The nonspecific DNA binding and bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures. Genes Dev. 7:1521-34
-
(1993)
Genes Dev.
, vol.7
, pp. 1521-1534
-
-
Paull, T.T.1
Haykinson, M.J.2
Johnson, R.3
-
133
-
-
0027524617
-
Chromosomal domains of supercoiling in Salmonella typhimurium
-
Pavitt GD, Higgins CF. 1993. Chromosomal domains of supercoiling in Salmonella typhimurium. Mol. Microbiol. 10:685-96
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 685-696
-
-
Pavitt, G.D.1
Higgins, C.F.2
-
134
-
-
0026775553
-
cAMP-CRP activator complex and the CytR repressor protein bind cooperatively to the cytRP promoter in Escherichia coli and CytR antagonizes the cAMP-CRP-induced bend
-
Pedersen H, Sogaard-Andersen L, Holst B, Gerlach P, Bremer E, et al. 1992. cAMP-CRP activator complex and the CytR repressor protein bind cooperatively to the cytRP promoter in Escherichia coli and CytR antagonizes the cAMP-CRP-induced bend. J. Mol. Biol. 227:396-406
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 396-406
-
-
Pedersen, H.1
Sogaard-Andersen, L.2
Holst, B.3
Gerlach, P.4
Bremer, E.5
-
135
-
-
0030998034
-
Protein-induced fit: The CRP activator protein changes sequence-specificity DNA recognition by the CytR repressor, a highly flexible LacI member
-
Pedersen H, Valentin-Hansen P. 1997. Protein-induced fit: the CRP activator protein changes sequence-specificity DNA recognition by the CytR repressor, a highly flexible LacI member. EMBO J. 16:2108-18
-
(1997)
EMBO J.
, vol.16
, pp. 2108-2118
-
-
Pedersen, H.1
Valentin-Hansen, P.2
-
137
-
-
0029073435
-
The receiver N-terminal domain of the prokaryotic enhancer-binding protein Xy1R is an specific intramolecular repressor
-
Pérez-Martín J, de Lorenzo V. 1995. The receiver N-terminal domain of the prokaryotic enhancer-binding protein Xy1R is an specific intramolecular repressor. Proc. Natl. Acad. Sci. USA 92:9392-96
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 9392-9396
-
-
Pérez-Martín, J.1
De Lorenzo, V.2
-
138
-
-
0028980296
-
54-dependent promoter Ps of the TOL plasmid of Pseudomonas putida requires HU for transcriptional activation in vivo by Xy1R
-
54-dependent promoter Ps of the TOL plasmid of Pseudomonas putida requires HU for transcriptional activation in vivo by Xy1R. J. Bacteriol. 177:3758-63
-
(1995)
J. Bacteriol.
, vol.177
, pp. 3758-3763
-
-
Pérez-Martín, J.1
De Lorenzo, V.2
-
139
-
-
0030602821
-
54-dependent activator Xy1R triggers a protein multimerization cycle catalyzed by UAS DNA
-
54-dependent activator Xy1R triggers a protein multimerization cycle catalyzed by UAS DNA. Cell 86:331-39
-
(1996)
Cell
, vol.86
, pp. 331-339
-
-
Pérez-Martín, J.1
De Lorenzo, V.2
-
140
-
-
0030612037
-
54-dependent promoter Pu of Pseudomonas putida by the prokaryotic histone HU and the mammalian HMG1 protein
-
54-dependent promoter Pu of Pseudomonas putida by the prokaryotic histone HU and the mammalian HMG1 protein. J. Bacteriol. 179:2757-60
-
(1997)
J. Bacteriol.
, vol.179
, pp. 2757-2760
-
-
Pérez-Martín, J.1
De Lorenzo, V.2
-
141
-
-
0024826346
-
Induced bending of plasmid pLS1 DNA by the plasmid encoded protein RepA
-
Pérez-Martín J, del Solar G, Lurz R, de la Campa A, Dobrinski B, Espinosa M. 1989. Induced bending of plasmid pLS1 DNA by the plasmid encoded protein RepA. J. Biol. Chem. 264:21334-39
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 21334-21339
-
-
Pérez-Martín, J.1
Del Solar, G.2
Lurz, R.3
De La Campa, A.4
Dobrinski, B.5
Espinosa, M.6
-
142
-
-
0025821564
-
The RepA repressor can act as a transcriptional activator by inducing DNA bends
-
Pérez-Martín J, Espinosa M. 1991. The RepA repressor can act as a transcriptional activator by inducing DNA bends. EMBO J. 10:1375-82
-
(1991)
EMBO J.
, vol.10
, pp. 1375-1382
-
-
Pérez-Martín, J.1
Espinosa, M.2
-
143
-
-
0027314409
-
Protein-induced bending as a transcriptional switch
-
Pérez-Martín J, Espinosa M. 1993. Protein-induced bending as a transcriptional switch. Science 260:805-7
-
(1993)
Science
, vol.260
, pp. 805-807
-
-
Pérez-Martín, J.1
Espinosa, M.2
-
144
-
-
0028108356
-
Correlation between DNA bending and transcriptional activation at a plasmid promoter
-
Pérez-Martín J, Espinosa M. 1994. Correlation between DNA bending and transcriptional activation at a plasmid promoter. J. Mol. Biol. 241:7-17
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 7-17
-
-
Pérez-Martín, J.1
Espinosa, M.2
-
145
-
-
0028298256
-
Promoters responsive to DNA bending: A common theme in prokaryotic gene expression
-
Pérez-Martín J, Rojo F, de Lorenzo V. 1994. Promoters responsive to DNA bending: a common theme in prokaryotic gene expression. Microbiol. Rev. 58:268-90
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 268-290
-
-
Pérez-Martín, J.1
Rojo, F.2
De Lorenzo, V.3
-
146
-
-
0028100756
-
54-dependent promoter Pu of the upper-TOL operon by intrinsically curved sequences
-
54-dependent promoter Pu of the upper-TOL operon by intrinsically curved sequences. J. Biol. Chem. 269:22657-62
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 22657-22662
-
-
Pérez-Martín, J.1
Timmis, K.N.2
De Lorenzo, V.3
-
147
-
-
0023682629
-
Histone-like proteins and bacterial chromosome structure
-
Pettijohn DE. 1988. Histone-like proteins and bacterial chromosome structure. J. Biol. Chem. 263:12793-96
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 12793-12796
-
-
Pettijohn, D.E.1
-
148
-
-
0015708687
-
RNA molecules bound to the folded bacterial genome stabilize DNA folds and segregate domains of supercoiling
-
Pettijohn DE, Hecht R. 1973. RNA molecules bound to the folded bacterial genome stabilize DNA folds and segregate domains of supercoiling. Cold Spring Harbor Symp. Quant. Biol. 38: 31-41
-
(1973)
Cold Spring Harbor Symp. Quant. Biol.
, vol.38
, pp. 31-41
-
-
Pettijohn, D.E.1
Hecht, R.2
-
149
-
-
0027359690
-
High-mobility-group 1 protein mediates DNA bending as determined by ring closures
-
Pil PM, Chow CS, Lippard SJ. 1993. High-mobility-group 1 protein mediates DNA bending as determined by ring closures. Proc. Natl. Acad. Sci. USA 90: 9465-69
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 9465-9469
-
-
Pil, P.M.1
Chow, C.S.2
Lippard, S.J.3
-
150
-
-
0024469348
-
Sequence of the nagBACD operon in Escherichia coli K12 and pattern of transcription with the nag regulon
-
Plumbridge JA. 1989. Sequence of the nagBACD operon in Escherichia coli K12 and pattern of transcription with the nag regulon. Mol. Microbiol. 3:506-15
-
(1989)
Mol. Microbiol.
, vol.3
, pp. 506-515
-
-
Plumbridge, J.A.1
-
151
-
-
0025971343
-
CAP and Nag repressor binding to the regulatory regions of the nagEB and manX genes of Escherichia coli
-
Plumbridge JA, Kolb A. 1991. CAP and Nag repressor binding to the regulatory regions of the nagEB and manX genes of Escherichia coli. J. Mol. Biol. 217:661-79
-
(1991)
J. Mol. Biol.
, vol.217
, pp. 661-679
-
-
Plumbridge, J.A.1
Kolb, A.2
-
153
-
-
0030960672
-
Transcriptional activation by recruitment
-
Ptashne M, Gann A. 1997. Transcriptional activation by recruitment. Nature 386:569-77
-
(1997)
Nature
, vol.386
, pp. 569-577
-
-
Ptashne, M.1
Gann, A.2
-
154
-
-
0024594574
-
A complex nucleoprotein structure involved in activation of transcription of two divergent Escherichia coli promoters
-
Raibaud O, Vidal-Ingigliardi D, Richet E. 1989. A complex nucleoprotein structure involved in activation of transcription of two divergent Escherichia coli promoters. J. Mol. Biol. 205:471-85
-
(1989)
J. Mol. Biol.
, vol.205
, pp. 471-485
-
-
Raibaud, O.1
Vidal-Ingigliardi, D.2
Richet, E.3
-
155
-
-
0030860391
-
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators
-
In press
-
Ramos JL, Marqués S, Timmis KN. 1997. Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators. Annu. Rev. Microbiol. 51: In press
-
(1997)
Annu. Rev. Microbiol.
, vol.51
-
-
Ramos, J.L.1
Marqués, S.2
Timmis, K.N.3
-
156
-
-
0028230951
-
Factor-independent activation of rrnB Pl: An extended promoter with an upstream element that dramatically increases promoter strength
-
Rao L, Ross W, Appleman J, Gaal T, Leirmo S, et al. 1994. Factor-independent activation of rrnB Pl: an extended promoter with an upstream element that dramatically increases promoter strength. J. Mol. Biol. 235:1421-35
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 1421-1435
-
-
Rao, L.1
Ross, W.2
Appleman, J.3
Gaal, T.4
Leirmo, S.5
-
157
-
-
0027268618
-
Solution structure of a DNA-binding domain from HMG1
-
Read CM, Cary PD, Crane-Robinson C, Driscoll PC, Norman DG. 1993. Solution structure of a DNA-binding domain from HMG1. Nucleic Acid Res. 21: 3427-36
-
(1993)
Nucleic Acid Res.
, vol.21
, pp. 3427-3436
-
-
Read, C.M.1
Cary, P.D.2
Crane-Robinson, C.3
Driscoll, P.C.4
Norman, D.G.5
-
158
-
-
0029144926
-
Binding of the transcription activator NRI (NTRC) to a supercoiled DNA segment imitates association with the natural enhancer: An electron microscopic investigation
-
Revet B, Brahms S, Brahms G. 1995. Binding of the transcription activator NRI (NTRC) to a supercoiled DNA segment imitates association with the natural enhancer: an electron microscopic investigation. Proc. Natl. Acad. Sci. USA 92:7535-39
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 7535-7539
-
-
Revet, B.1
Brahms, S.2
Brahms, G.3
-
159
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced U-turn
-
Rice PA, Yang S, Mizuuchi K, Nash HA. 1996. Crystal structure of an IHF-DNA complex: a protein-induced U-turn. Cell 87:1295-306
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
160
-
-
0027983641
-
CRP induces the repositioning of MalT at the Escherichia coli malKp promoter primarily through DNA bending
-
Richet E, Sogaard-Andersen L. 1994. CRP induces the repositioning of MalT at the Escherichia coli malKp promoter primarily through DNA bending. EMBO J. 13:4558-67
-
(1994)
EMBO J.
, vol.13
, pp. 4558-4567
-
-
Richet, E.1
Sogaard-Andersen, L.2
-
161
-
-
0025886425
-
A new mechanism for coactivation of transcriptional activation: Repositioning of an activator triggered by the binding of a second activator
-
Richet E, Vidal-Ingigliardi D, Raibaud O. 1991. A new mechanism for coactivation of transcriptional activation: repositioning of an activator triggered by the binding of a second activator. Cell 66:1185-95
-
(1991)
Cell
, vol.66
, pp. 1185-1195
-
-
Richet, E.1
Vidal-Ingigliardi, D.2
Raibaud, O.3
-
163
-
-
0026040582
-
A DNA curvature can substitute phage Φ29 regulatory protein p4 when acting as a transcriptional repressor
-
Rojo F, Salas M. 1991. A DNA curvature can substitute phage Φ29 regulatory protein p4 when acting as a transcriptional repressor. EMBO J. 10:3429-38
-
(1991)
EMBO J.
, vol.10
, pp. 3429-3438
-
-
Rojo, F.1
Salas, M.2
-
164
-
-
0025323444
-
Bend induced by phage Φ29 transcriptional activator in the viral late promoter is required for activation
-
Rojo F, Zaballos A, Salas M. 1990. Bend induced by phage Φ29 transcriptional activator in the viral late promoter is required for activation. J. Mol. Biol. 211:713-25
-
(1990)
J. Mol. Biol.
, vol.211
, pp. 713-725
-
-
Rojo, F.1
Zaballos, A.2
Salas, M.3
-
165
-
-
0018405881
-
E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA
-
Rouviere-Yaniv J, Yaniv M. 1979. E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA. Cell 17:265-74
-
(1979)
Cell
, vol.17
, pp. 265-274
-
-
Rouviere-Yaniv, J.1
Yaniv, M.2
-
167
-
-
0029087027
-
Nonspecific DNA bending and the specificity of protein-DNA interactions
-
Schepartz A. 1995. Nonspecific DNA bending and the specificity of protein-DNA interactions. Science 269:989
-
(1995)
Science
, vol.269
, pp. 989
-
-
Schepartz, A.1
-
168
-
-
0027459196
-
A nucleosome-dependent static loop potentiates estrogen-regulated transcription from the Xenopus vitellogenin B1 promoter in vitro
-
Schild C, Claret FX, Wahli W, Wolffe AP. 1993. A nucleosome-dependent static loop potentiates estrogen-regulated transcription from the Xenopus vitellogenin B1 promoter in vitro. EMBO J. 12:423-33
-
(1993)
EMBO J.
, vol.12
, pp. 423-433
-
-
Schild, C.1
Claret, F.X.2
Wahli, W.3
Wolffe, A.P.4
-
169
-
-
0000680346
-
The L-arabinose operon
-
ed. FC Neidhart, JL Ingraham, KB Low, B Magasanik, M Schaetcher, HE Umbarger, Washington, DC: Am. Soc. Microbiol.
-
Schleif R. 1987. The L-arabinose operon. In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, ed. FC Neidhart, JL Ingraham, KB Low, B Magasanik, M Schaetcher, HE Umbarger, pp. 1473-81. Washington, DC: Am. Soc. Microbiol.
-
(1987)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
, pp. 1473-1481
-
-
Schleif, R.1
-
170
-
-
0025153881
-
More than just "histone-like" proteins
-
Schmidt MD. 1990. More than just "histone-like" proteins. Cell 63:451-53
-
(1990)
Cell
, vol.63
, pp. 451-453
-
-
Schmidt, M.D.1
-
172
-
-
0000706936
-
The maltose regulon
-
ed. FC Neidhart, JL Ingraham, KB Low, B Magasanik, M Schaetcher, HE Umbarger, Washington, DC: Am. Soc. Microbiol.
-
Schwartz M. 1987. The maltose regulon. In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, ed. FC Neidhart, JL Ingraham, KB Low, B Magasanik, M Schaetcher, HE Umbarger, pp. 1482-502. Washington, DC: Am. Soc. Microbiol.
-
(1987)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
, pp. 1482-1502
-
-
Schwartz, M.1
-
173
-
-
0028147923
-
Architectural elements in nucleoprotein complexes: Interchangeability of specific and nonspecific DNA-binding proteins
-
Segall AM, Goodman SD, Nash HA. 1994. Architectural elements in nucleoprotein complexes: interchangeability of specific and nonspecific DNA-binding proteins. EMBO J. 13:4536-48
-
(1994)
EMBO J.
, vol.13
, pp. 4536-4548
-
-
Segall, A.M.1
Goodman, S.D.2
Nash, H.A.3
-
174
-
-
0025753820
-
Transcription activation at a distance by phage Φ29 protein p4: Effect of bent and non-bent intervening DNA sequences
-
Serrano M, Barthelemy I, Salas M. 1991. Transcription activation at a distance by phage Φ29 protein p4: effect of bent and non-bent intervening DNA sequences. J. Mol. Biol. 219:403-14
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 403-414
-
-
Serrano, M.1
Barthelemy, I.2
Salas, M.3
-
175
-
-
0028578025
-
Phage Φ29 protein p6: A viral histone-like protein
-
Serrano M, Gutierrez C, Freire R, Bravo A, Salas M, et al. 1994. Phage Φ29 protein p6: a viral histone-like protein. Biochimie 76:981-91
-
(1994)
Biochimie
, vol.76
, pp. 981-991
-
-
Serrano, M.1
Gutierrez, C.2
Freire, R.3
Bravo, A.4
Salas, M.5
-
176
-
-
0029610588
-
Characterization of the binding of HU and IHF, homologous histone-like proteins of Escherichia coli, to curved and uncurved DNA
-
Shimizu M, Miyake M, Kanke F, Matsumoto U, Shindo H. 1995. Characterization of the binding of HU and IHF, homologous histone-like proteins of Escherichia coli, to curved and uncurved DNA. Biochim. Biophys. Acta 1264:330-36
-
(1995)
Biochim. Biophys. Acta
, vol.1264
, pp. 330-336
-
-
Shimizu, M.1
Miyake, M.2
Kanke, F.3
Matsumoto, U.4
Shindo, H.5
-
177
-
-
0021022977
-
Energetics of DNA twisting
-
Shore D, Baldwin RL. 1983. Energetics of DNA twisting. J. Mol. Biol. 170:957-81
-
(1983)
J. Mol. Biol.
, vol.170
, pp. 957-981
-
-
Shore, D.1
Baldwin, R.L.2
-
178
-
-
0028957883
-
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli
-
Sledjeski D, Gottesman S. 1995. A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli. Proc. Natl. Acad. Sci. USA 92:2003-7
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 2003-2007
-
-
Sledjeski, D.1
Gottesman, S.2
-
179
-
-
0030814122
-
Modulation of gene expression through chromosomal positioning
-
In press
-
Sousa C, de Lorenzo V, Cebolla A. 1997. Modulation of gene expression through chromosomal positioning. Microbiology. In press
-
(1997)
Microbiology
-
-
Sousa, C.1
De Lorenzo, V.2
Cebolla, A.3
-
180
-
-
0025113061
-
DNA bending is a determinant of binding specificity for a Drosophila zinc finger protein
-
Spana C, Corces VG. 1990. DNA bending is a determinant of binding specificity for a Drosophila zinc finger protein. Genes Dev. 4:1505-15
-
(1990)
Genes Dev.
, vol.4
, pp. 1505-1515
-
-
Spana, C.1
Corces, V.G.2
-
181
-
-
0021299236
-
On the action of the cyclic AMP-cyclic AMP receptor protein complex at the Escherichia coli lactose and galactose promoter regions
-
Spassky A, Busby S, Buc H. 1984. On the action of the cyclic AMP-cyclic AMP receptor protein complex at the Escherichia coli lactose and galactose promoter regions. EMBO J. 3:43-50
-
(1984)
EMBO J.
, vol.3
, pp. 43-50
-
-
Spassky, A.1
Busby, S.2
Buc, H.3
-
182
-
-
0029127570
-
DNA bending is an important component of site-recognition by the TATA binding protein
-
Starr DB, Hoopes BC, Hawley DK. 1995. DNA bending is an important component of site-recognition by the TATA binding protein. J. Mol. Biol. 250:434-46
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 434-446
-
-
Starr, D.B.1
Hoopes, B.C.2
Hawley, D.K.3
-
184
-
-
0023760783
-
Role of the intercistronic region in post-transcriptional control of gene expression in the histidine transport operon of Salmonella typhimurium: Involvement of REP sequences
-
Stern MJ, Prossnitz E, Ames GFL. 1988. Role of the intercistronic region in post-transcriptional control of gene expression in the histidine transport operon of Salmonella typhimurium: involvement of REP sequences. Mol. Microbiol. 2:141-52
-
(1988)
Mol. Microbiol.
, vol.2
, pp. 141-152
-
-
Stern, M.J.1
Prossnitz, E.2
Ames, G.F.L.3
-
185
-
-
0027997554
-
DNA conformational changes associated with the cooperative binding of cI-repressor of bacteriophage lambda to or
-
Strahs D, Brenowitz M. 1994. DNA conformational changes associated with the cooperative binding of cI-repressor of bacteriophage lambda to OR. J. Mol. Biol. 244:494-510
-
(1994)
J. Mol. Biol.
, vol.244
, pp. 494-510
-
-
Strahs, D.1
Brenowitz, M.2
-
186
-
-
0028597967
-
DNA bending by asymmetric phosphate neutralization
-
Strauss JK, Maher LJ. 1994. DNA bending by asymmetric phosphate neutralization. Science 266:1829-34
-
(1994)
Science
, vol.266
, pp. 1829-1834
-
-
Strauss, J.K.1
Maher, L.J.2
-
187
-
-
0028783423
-
The HPr protein of the phosphotransferase system links induction and catabolite repression of the Bacillus subtilis levanase operon
-
Stulke J, Martin-Vestraete I, Charrier V, Klier A, Deutscher J, Rapoport G. 1995. The HPr protein of the phosphotransferase system links induction and catabolite repression of the Bacillus subtilis levanase operon. J. Bacteriol. 177:6928-36
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6928-6936
-
-
Stulke, J.1
Martin-Vestraete, I.2
Charrier, V.3
Klier, A.4
Deutscher, J.5
Rapoport, G.6
-
188
-
-
0029887333
-
DNA conformation and its changes upon binding transcription factors
-
Suzuki M, Loakes D, Yagi N. 1996. DNA conformation and its changes upon binding transcription factors. Adv. Biophys. 32:53-72
-
(1996)
Adv. Biophys.
, vol.32
, pp. 53-72
-
-
Suzuki, M.1
Loakes, D.2
Yagi, N.3
-
189
-
-
0029041940
-
Stereochemical basis of DNA bending by transcription factors
-
Suzuki M, Yagi N. 1995. Stereochemical basis of DNA bending by transcription factors. Nucleic Acids Res. 23:2083-91
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2083-2091
-
-
Suzuki, M.1
Yagi, N.2
-
190
-
-
0029866801
-
An in-the-groove view of DNA structures in complexes with proteins
-
Suzuki M, Yagi N. 1996. An in-the-groove view of DNA structures in complexes with proteins. J. Mol. Biol. 255:677-87
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 677-687
-
-
Suzuki, M.1
Yagi, N.2
-
191
-
-
0030048596
-
Role of base-backbone and base-base interactions in alternating DNA conformations
-
Suzuki M, Yagi N, Finch JT. 1996. Role of base-backbone and base-base interactions in alternating DNA conformations. FEBS Lett. 379:148-52
-
(1996)
FEBS Lett.
, vol.379
, pp. 148-152
-
-
Suzuki, M.1
Yagi, N.2
Finch, J.T.3
-
192
-
-
0027940254
-
An additional role of transcriptional activation of ori lambda in the regulation of lambda plasmid replication in Escherichia coli
-
Szalewska-Palasz A, Wegrzyn G. 1994. An additional role of transcriptional activation of ori lambda in the regulation of lambda plasmid replication in Escherichia coli. Biochem. Biophys. Res. Commun. 205:802-6
-
(1994)
Biochem. Biophys. Res. Commun.
, vol.205
, pp. 802-806
-
-
Szalewska-Palasz, A.1
Wegrzyn, G.2
-
193
-
-
0021286693
-
3Å resolution structure of a protein with histone-like properties in prokaryotes
-
Tanaka I, Appelt K, Dijk J, White S, Wilson K. 1984. 3Å resolution structure of a protein with histone-like properties in prokaryotes. Nature 310:376-81
-
(1984)
Nature
, vol.310
, pp. 376-381
-
-
Tanaka, I.1
Appelt, K.2
Dijk, J.3
White, S.4
Wilson, K.5
-
194
-
-
0026489365
-
The high mobility group protein HMGI(Y) is required for NF-κB-dependent virus induction of the human IFN-b gene
-
Thanos D, Maniatis T. 1992. The high mobility group protein HMGI(Y) is required for NF-κB-dependent virus induction of the human IFN-b gene. Cell 71:777-89
-
(1992)
Cell
, vol.71
, pp. 777-789
-
-
Thanos, D.1
Maniatis, T.2
-
195
-
-
0024042734
-
Protein/DNA architecture of the DNase I hypersensitive region of the Drosophila HSP26 promoter
-
Thomas GH, Elgin SC. 1988. Protein/DNA architecture of the DNase I hypersensitive region of the Drosophila HSP26 promoter. EMBO J. 7:2191-201
-
(1988)
EMBO J.
, vol.7
, pp. 2191-2201
-
-
Thomas, G.H.1
Elgin, S.C.2
-
196
-
-
0028306747
-
Evidence for a regulatory function of the histone-like Escherichia coli
-
Tippner D, Afflerbach H, Bradaczek C, Wagner R. 1994. Evidence for a regulatory function of the histone-like Escherichia coli protein H-NS in ribosomal RNA synthesis. Mol. Microbiol. 11:589-604
-
(1994)
Mol. Microbiol.
, vol.11
, pp. 589-604
-
-
Tippner, D.1
Afflerbach, H.2
Bradaczek, C.3
Wagner, R.4
-
197
-
-
0024373679
-
DNA conformation and protein binding
-
Travers AA. 1989. DNA conformation and protein binding. Annu. Rev. Biochem. 58:427-52
-
(1989)
Annu. Rev. Biochem.
, vol.58
, pp. 427-452
-
-
Travers, A.A.1
-
198
-
-
0028226799
-
DNA chaperones: A solution to a persistence problem?
-
Travers AA, Ner SS, Churchill MEA. 1994. DNA chaperones: a solution to a persistence problem? Cell 77:167-69
-
(1994)
Cell
, vol.77
, pp. 167-169
-
-
Travers, A.A.1
Ner, S.S.2
Churchill, M.E.A.3
-
200
-
-
0029927561
-
A flexible partnership: The CytR anti-activator and the cAMP-CRP activator protein, comrades in transcription control
-
Valentin-Hansen P, Søgaard-Andersen L, Pedersen H. 1996. A flexible partnership: the CytR anti-activator and the cAMP-CRP activator protein, comrades in transcription control. Mol. Microbiol. 20:461-66
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 461-466
-
-
Valentin-Hansen, P.1
Søgaard-Andersen, L.2
Pedersen, H.3
-
201
-
-
0029081395
-
Leucine-responsive regulatory protein plays dual roles as both an activator and a repressor of the Escherichia coli pap fimbrial operon
-
van der Woude MW, Kaltenbach LS, Low DA. 1995. Leucine-responsive regulatory protein plays dual roles as both an activator and a repressor of the Escherichia coli pap fimbrial operon. Mol. Microbiol. 17:303-12
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 303-312
-
-
Van Der Woude, M.W.1
Kaltenbach, L.S.2
Low, D.A.3
-
202
-
-
0029812751
-
Integration host factor alleviates the H-NS-mediated repression of the early promoter of bacteriophage Mu
-
van Ulsen P, Hillebrand M, Zulianello L, van de Putte P, Goosen N. 1996. Integration host factor alleviates the H-NS-mediated repression of the early promoter of bacteriophage Mu. Mol. Microbiol. 21:567-78
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 567-578
-
-
Van Ulsen, P.1
Hillebrand, M.2
Zulianello, L.3
Van De Putte, P.4
Goosen, N.5
-
203
-
-
0029943734
-
DNA supercoiling depends on the phosphorylation potential in Escherichia coli
-
van Workum M, van Dooren JM, Oldenburg N, Molenaar D, Jensen PR, et al. 1996. DNA supercoiling depends on the phosphorylation potential in Escherichia coli. Mol. Microbiol. 20:351-60
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 351-360
-
-
Van Workum, M.1
Van Dooren, J.M.2
Oldenburg, N.3
Molenaar, D.4
Jensen, P.R.5
-
204
-
-
9844266266
-
Action at a distance along a DNA
-
Wang JC, Giaever GN. 1988. Action at a distance along a DNA. Science 250:528-32
-
(1988)
Science
, vol.250
, pp. 528-532
-
-
Wang, J.C.1
Giaever, G.N.2
-
205
-
-
0028598544
-
Sequence determinants of DNA bending in the ilvlH promoter and regulatory region of Escherichia coli
-
Wang Q, Albert FG, Fitzgerald DJ, Calvo JM, Anderson JN. 1994. Sequence determinants of DNA bending in the ilvlH promoter and regulatory region of Escherichia coli. Nucleic Acids Res. 22:5753-60
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5753-5760
-
-
Wang, Q.1
Albert, F.G.2
Fitzgerald, D.J.3
Calvo, J.M.4
Anderson, J.N.5
-
206
-
-
0027285868
-
Lrp, a major regulatory protein in Escherichia coli, bends DNA and can organize the assembly of a higher-order nucleoprotein structure
-
Wang Q, Calvo J. 1993. Lrp, a major regulatory protein in Escherichia coli, bends DNA and can organize the assembly of a higher-order nucleoprotein structure. EMBO J. 12:2495-501
-
(1993)
EMBO J.
, vol.12
, pp. 2495-2501
-
-
Wang, Q.1
Calvo, J.2
-
207
-
-
0027414641
-
Structure of the HMG box motif in the B-domain of HMG-1
-
Weir HM, Draulis PJ, Hill CS, Raine ARC, Laue ED, Thomas JO. 1993. Structure of the HMG box motif in the B-domain of HMG-1. EMBO J. 12:1311-19
-
(1993)
EMBO J.
, vol.12
, pp. 1311-1319
-
-
Weir, H.M.1
Draulis, P.J.2
Hill, C.S.3
Raine, A.R.C.4
Laue, E.D.5
Thomas, J.O.6
-
208
-
-
0030046809
-
Intercalation, DNA kinking, and the control of transcription
-
Werner MG, Grononborn AM, Clore GM. 1996. Intercalation, DNA kinking, and the control of transcription. Science 271:778-84
-
(1996)
Science
, vol.271
, pp. 778-784
-
-
Werner, M.G.1
Grononborn, A.M.2
Clore, G.M.3
-
209
-
-
0015506478
-
On the structure of the folded chromosome of Escherichia coli
-
Worcel A, Burgi E. 1972. On the structure of the folded chromosome of Escherichia coli. J. Mol. Biol. 71:127-47
-
(1972)
J. Mol. Biol.
, vol.71
, pp. 127-147
-
-
Worcel, A.1
Burgi, E.2
-
210
-
-
0021268779
-
The locus of sequence-directed and protein-induced DNA bending
-
Wu HM, Crothers DM. 1984. The locus of sequence-directed and protein-induced DNA bending. Nature 308:509-13
-
(1984)
Nature
, vol.308
, pp. 509-513
-
-
Wu, H.M.1
Crothers, D.M.2
-
211
-
-
0030002132
-
Glutamate is required to maintain the steady state potassium pool in Salmonella typhimurium
-
Yan D, Ikeda TP, Shauger AE, Kustu S. 1996. Glutamate is required to maintain the steady state potassium pool in Salmonella typhimurium. Proc. Natl. Acad. Sci. USA 93:6527-31
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 6527-6531
-
-
Yan, D.1
Ikeda, T.P.2
Shauger, A.E.3
Kustu, S.4
-
212
-
-
0002023387
-
The family of repetitive extragenic palindromic sequences: Interaction with DNA gyrase and histone-like protein HU
-
ed. K Drilica, M Riley, Washington, DC: Am. Soc. Microbiol.
-
Yang Y, Ames GFL. 1990. The family of repetitive extragenic palindromic sequences: interaction with DNA gyrase and histone-like protein HU. In The Bacterial Chromosome, ed. K Drilica, M Riley, pp. 211-25. Washington, DC: Am. Soc. Microbiol.
-
(1990)
The Bacterial Chromosome
, pp. 211-225
-
-
Yang, Y.1
Gfl, A.2
-
213
-
-
0029944245
-
Effects of Fis on ribosome synthesis and activity and on rRNA promoter activities in Escherichia coli
-
Zhang X, Bremer H. 1996. Effects of Fis on ribosome synthesis and activity and on rRNA promoter activities in Escherichia coli. J. Mol. Biol. 259:27-40
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 27-40
-
-
Zhang, X.1
Bremer, H.2
-
214
-
-
0028931445
-
In vitro analysis of a constitutively active mutant form of the Escherichia coli global transcription factor FNR
-
Ziegelhoffer EC, Kiley PJ. 1995. In vitro analysis of a constitutively active mutant form of the Escherichia coli global transcription factor FNR. J. Mol. Biol. 245:351-61
-
(1995)
J. Mol. Biol.
, vol.245
, pp. 351-361
-
-
Ziegelhoffer, E.C.1
Kiley, P.J.2
-
215
-
-
0024670868
-
DNA bending by negative regulatory proteins: Gal and Lac repressors
-
Zwieb C, Kim J, Adhya S. 1989. DNA bending by negative regulatory proteins: Gal and Lac repressors. Genes Dev. 3:602-11
-
(1989)
Genes Dev.
, vol.3
, pp. 602-611
-
-
Zwieb, C.1
Kim, J.2
Adhya, S.3
|