A molecular phylogeny of the endemic Australian genus Gastrolobium (Fabaceae: Mirbelieae) and allied genera using chloroplast And nuclear markers

American Journal of Botany

Volumn 88, Issue 9, 2001, Pages 1675-1687

  Chandler, Gregory T ^a,b   Bayer, Randall J ^c   Crisp, Michael D ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^b VIRGINIA COMMONWEALTH UNIVERSITY   (United States)

^c CSIRO   (Australia)

Author keywords

External transcribed spacer; Fabaceae; Gastrolobium; matK, psbA trnH spacer; Mirbelieae; Molecular phylogenetics; trnK intron

Indexed keywords

EID: 0001486077     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.2307/3558413     Document Type: Article

References (61)

1. ALDRICH, J., B. W. CHERNEY, E. MERLIN, AND L. CHRISTOPHERSON. 1988. The role of insertions/deletions in the evolution of the intergenic region between psbA and trnH in the chloroplast genome. Current Genetics 14: 137-146.
2. APLIN, T. E. H. 1971. Poison plants of Western Australia: the toxic species of Gastrolobium and Oxylobium. Western Australian Department of Agriculture Bulletin 3772: 1-66.
3. ASMUSSEN, C. B., AND A. LISTON. 1998. Chloroplast DNA characters, phylogeny, and classification of Lathyrus (Fabaceae). American Journal of Botany 85: 387-401.
4. BALDWIN, B. G., AND S. MARKOS. 1998. Phylogenetic utility of the external transcribed spacer (ETS) of 18S-26S nrDNA: congruence of ETS and ITS trees of Calycadenia (Compositae). Molecular Phylogenetics and Evolution 10: 449-463.
5. BAYER, R. J., L. HUFFORD, AND D. E. SOLTIS. 1996. Phylogenetic relationships in Sarraceniaceae based on rbcL and ITS sequences. Systematic Botany 21: 121-134.
6. BENA, G., M.-E JUBIER, I. OLIVIERA, AND B. LEJEUNE. 1998. Ribosomal external and internal transcribed spacers: combined use in the phylogenetic analysis of Medicago (Leguminosae). Journal of Molecular Evolution 46: 299-306.
7. BENTHAM, G. 1864. Flora Australiensis, vol. 2. Reeve and Co., London, UK.
8. BORISJUK, N., L. BORISJUK, G. PETJUCH, AND V. HEMLEBEN. 1994. Comparison of nuclear ribosomal RNA genes among Solanum species and other Solanaceae. Genome 37: 271-279.
9. BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42: 795-803.
10. BROWN, R. 1811. Gastrolobium. In W. T. Aiton [ed.], Hortus Kewensis, 2nd ed., part iii, 16. Longman, London, UK.
11. COEN, E. S. 1991. The role of homeotic genes in flower development and evolution. Annual Review of Ecology and Systematics 42: 241-279.
12. _, AND E. M. MEYEROWITZ. 1991. The war of the whorls: genetic interactions controlling flower development. Nature 353: 31-37.
13. CRISP, M. D. 1994. Evolution of bird-pollination in some Australian legumes (Fabaceae). In P. Eggleton and R. Vane-Wright [eds.], Phylogenetics and ecology. 281-309. Academic Press, London, UK.
14. _, S. R. GILMORE, AND B.-E. VAN WYK. 2000. Molecular phylogeny of the genistoid tribes of papilionoid legumes. In P. S. Herendeen and A. Bruneau [eds.], Advances in legume systematics, part 9, 249-276, Royal Botanic Gardens, Kew, UK.
15. _, AND P. H. WESTON. 1987. Cladistics and legume systematics, with an analysis of the Bossiaeeae, Brongniartieae and Mirbelieae. In C. H. Stirton [ed.], Advances in legume systematics, part 3, 65-130. Royal Botanic Gardens, Kew, UK.
16. _, AND _. 1995. Mirbelieae. In M. D. Crisp, and J. J. Doyle [eds.], Advances in legume systematics, part 7, Phylogeny, 245-282. Royal Botanic Gardens, Kew, UK.
17. DOMIN, K. 1923. Nemcia, a new genus of the Leguminosae, Preslia 2: 26-31.
18. ERIKSSON, T. 1998. AutoDecay version 4.0 (program distributed by the author). Bergius Foundation, Royal Swedish Academy of Sciences, Stockholm. Available on the web from http://www.bergianska.se/personal/ TorstenE/
19. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
20. GADEK, P. A., D. L. ALPERS, M. H. HESLEWOOD, AND C. J. QUINN. 2000. Relationships within Cupressaceae sensu lato: a combined morphological and molecular approach. American Journal of Botany 87: 1044-1057.
21. GARDNER, C. A., AND H. W. BENNETTS. 1956. The toxic plants of Western Australia. West Australian Newspapers Ltd., Periodicals Division, Perth, Australia.
22. GILMORE, S., P. H. WESTON, AND J. A. THOMPSON. 1993. A simple, rapid, inexpensive, and widely applicable technique for purifying plant DNA. Australian Systematic Botany 6: 139-148.
23. GOLENBURG, E. M., M. T. CLEGG, M. L. DURBIN, J. DOEBLEY, AND D. P. MA. 1993. Evolution of a noncoding region of the chloroplast genome. Molecular Phylogenetics and Evolution 2: 52-64.
24. GOTTLIEB, L. D. 1984. Genetics and morphological evolution in plants. American Naturalist 123: 681-709.
25. HILU, K. W., AND L. A. ALICE. 1999. Evolutionary implications of matK indels in Poaceae. American Journal of Botany 86: 1735-1741.
26. _, AND H. LIANG. 1997. The matK gene: sequence variation and application in plant systematics. American Journal of Botany 84: 830-839.
27. HU, J.-M., M. LAVIN, M. F. WOJCIECHOWSKI, AND M. J. SANDERSON. 2000. Phylogenetic systematics of the tribe Millettieae (Leguminosae) based on chloroplast trnK/matK sequences and its implications for evolutionary patterns in Papilionoideae. American Journal of Botany 87: 418-430.
28. JARRELL, D. C., AND M. T. CLEGG. 1995. Systematic implications of the chloroplast-encoded matK gene on the tribe Vandeae (Orchidaceae). American Journal of Botany 82: 137.
29. JOHNSON, L. A., J. L. SCHULTZ, D. E. SOLTIS, AND P. S. SOLTIS. 1996. Monophyly and generic relationships of Polemoniaceae based on matK sequences. American Journal of Botany 83: 1207-1224.
30. _, AND D. E. SOLTIS. 1994. matK DNA sequences and phylogenetic reconstruction in Saxifragaceae s. str. Systematic Botany 19: 143-156.
31. _, AND _. 1995. Phylogenetic inference in Saxifragaceae sensu stricto and Gilia (Polemoniaceae) using matK sequences. Annals of the Missouri Botanic Gardens 82: 149-175.
32. KEIGHERY, G. J. 1980. Bird pollination in south Western Australia: a checklist. Plant Systematics and Evolution 135: 171-176.
33. _. 1982. Bird-pollinated plants in Western Australia. In J. A. Armstrong, J. M. Powell, and A. J. Richards [eds.], Pollination and evolution, 77-89. Royal Botanic Gardens, Sydney, Australia.
34. _. 1984. Pollination of Jansonia formosa Kipp. ex Lindl. (Papilionaceae). Western Australian Naturalist 16: 21.
35. KELCHNER, S. A., AND L. G. CLARK. 1997. Molecular evolution and phylogenetic utility of the chloroplast rpl16 intron in Chusquea and the Bambusoideae (Poaceae). Molecular Phylogenetics and Evolution 8: 385-397.
36. KIM, S.-C., D. J. CRAWFORD, R. K. JANSEN, AND S.-G. ARNOLDO. 1999. The use of a non-coding region of chloroplast DNA in phylogenetic studies of the subtribe Sonchinae (Asteraceae: Lactuceae). Plant Systematics and Evolution 215: 85-99.
37. KING, K., R. A. TORRES, U. ZENTGRAF, AND V. HEMLEBEN. 1993. Molecular evolution of the intergenic spacer in the nuclear ribosomal RNA genes of Cucurbitaceae. Journal of Molecular Evolution 36: 144-152.
38. KUNTZE, O. 1891. Revisio generum plantarum vascularium omnium atque cellularium multarum secundum leges nomeclaturae internationales: cum enumeratione plantarum exoticarum initinere mundi collectarum: mit Erläuterungen. Part 1. A. Felix, Leipzig, Germany.
39. LES, D. H., E. L. SCHNEIDER, D. J. PADGETT, P. S. SOLTIS, D. E. SOLTIS, AND M. ZANIS. 1999. Phylogeny, classification and floral evolution of water lilies (Nymphaeaceae; Nymphaeales): a synthesis of non-molecular, rbcL, matK, and 18S rDNA data. Systematic Botany 24: 28-46.
40. LIANG, H., AND K. W. HILU. 1996. Application of the matK gene sequences to grass systematics. Canadian Journal of Botany 74: 125-134.
41. LINDER, C. R., L. R. GOERTZEN, B. V. HEUVEL, J. FRANCISCO-ORTEGA, AND R. K. JANSEN. 2000. The complete external transcribed spacer of 18S-26S rDNA: amplification and phylogenetic utility at low taxonomic levels in Asteraceae and closely allied families. Molecular Phylogenetics and Evolution 14: 285-303.
42. MADDISON, D. R. 1991. The discovery and importance of multiple islands of most parsimonious trees. Systematic Zoology 40: 315-328.
43. PAGE, R. D. M. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357-358.
44. PLUNKETT, G. M., D. E. SOLTIS, AND P. S. SOLTIS. 1996. Evolutionary patterns in Apiaceae: inferences based on matK sequence data. Systematic Botany 21: 477-495.
45. PLUNKETT, G. M., D. E. SOLTIS, AND P. S. SOLTIS. 1997. Clarification of the relationship between Apiaceae and Araliaceae based on matK and rbcL sequence data. American Journal of Botany 84: 565-580.
46. RATHGEBER, J., AND I. CAPESIUS. 1990. Nucleotide sequence of the intergenic spacer and the 18S ribosomal RNA gene from mustard (Sinapsis alba). Nucleic Acids Research 18: 1288.
47. ROGERS, S. O., AND A. J. BENDICH. 1987a. Heritability and variability in ribosomal RNA genes of Vicia faba. Genetics 117: 285-295.
48. _, AND _. 1987b. Ribosomal DNA genes in plants: variability in copy number and in the intergenic spacer. Plant Molecular Biology 9: 509-520.
49. ROGSTAD, S. H. 1992. Saturated NaCl-CTAB solution as a means of field preservation of leaves for DNA analyses. Taxon 41: 701-708.
50. SANG, T., D. J. CRAWFORD, AND T. F. STUESSY. 1997. Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae). American Journal of Botany 84: 1120-1136.
51. SANGER, F, S. NICKLEN, AND A. R. COULSON. 1977. DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences, USA 74: 5463-5467.
52. SCHIEBEL, K., G. WALDBURG, J. GERSTNER, AND V. HEMLEBEN. 1989. Termination of transcription of ribosomal RNA genes of mung bean occurs within a 175 bp repetitive element of the spacer region. Molecular and General Genetics 218: 302-307.
53. SCHMIDT-PUCHTA, W., I. GUNTHER, AND H. L. SÄNGER. 1989. Nucleotide sequence of the intergenic spacer (IGS) of the tomato ribosomal DNA. Plant Molecular Biology 13: 251-253.
54. STANFORD, A. M., R. HARDEN, AND C. R. PARKS. 2000. Phylogeny and biogeography of Juglans (Juglandaceae) based on matK and ITS sequence data. American Journal of Botany 87: 872-882.
55. STEELE, K. P., AND R. VILGALYS. 1994. Phylogenetic analysis of Polemoniaceae using nucleotide sequences of the plastid gene matK. Systematic Botany 19: 126-142.
56. SUGIURA, M. 1992. The chloroplast genome. Plant Molecular Biology 19: 149-168.
57. SWOFFORD, D. 1997. PAUP: phylogenetic analysis using parsimony, pre-release version 4.0b3a. Laboratory of Molecular Systematics, Smithsonian Institution, Washington, D.C., and Sinauer, Sunderland, Massachusetts, USA.
58. TWIGG, L. E., D. R. KING, L. H. BOWEN, G. R. WRIGHT, AND C. T. EASTON. 1996. Fluoroacetate content of some species of the toxic Australian genus, Gastrolobium, and its environmental persistance. Natural Toxins 4: 122-127.
59. VOLKOV, R., S. KOSTISHIN, F. EHRENDORFER, AND D. SCHWEIZER. 1996. Molecular organization and evolution of the external transcribed rDNA spacer region in two diploid relatives of Nicotiana tabacum (Solonaceae). Plant Systematics and Evolution 201: 117-129.
60. WANG, X.-R., Y. TSUMURA, H. YOSHIMARU, K. NAGASAKA, AND A. E. SZMIDT. 1999. Phylogenetic relationships of Eurasian pines (Pinus, Pinaceae) based on chloroplast rbcL, matK, rpl20-rpsI8 spacer, and trnV intron sequences. American Journal of Botany 86: 1742-1753.
61. XIANG, Q.-Y., D. E. SOLTIS, AND P. S. SOLTIS. 1998. Phylogenetic relationships of Cornaceae and close relatives inferred from matK and rbcL sequences. American Journal of Botany 85: 285-297.