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Volumn 4, Issue 11, 2004, Pages 2115-2120

Binding specificity of a peptide on semiconductor surfaces

Author keywords

[No Author keywords available]

Indexed keywords

ADHESION COEFFICIENTS; BINDING SPECIFICITY; PEPTIDES; SEMICONDUCTOR SURFACES;

EID: 9744243512     PISSN: 15306984     EISSN: None     Source Type: Journal    
DOI: 10.1021/nl048829p     Document Type: Article
Times cited : (112)

References (39)
  • 2
    • 0037436464 scopus 로고    scopus 로고
    • Kamien, R. D. Science 2003, 299, 1671-1673.
    • (2003) Science , vol.299 , pp. 1671-1673
    • Kamien, R.D.1
  • 11
  • 21
    • 9744274198 scopus 로고    scopus 로고
    • note
    • 17 the peptide with 20-nm long fluorescence-sensitive gold nanoparticles allowed for a direct visualization of the peptide clusters.
  • 22
    • 9744232470 scopus 로고    scopus 로고
    • A: alanine, Q: glutamine, N: asparagine, P: proline. S: serine, D: aspartate, T: threonine, H: histidine
    • A: alanine, Q: glutamine, N: asparagine, P: proline. S: serine, D: aspartate, T: threonine, H: histidine.
  • 23
    • 9744255710 scopus 로고    scopus 로고
    • note
    • 2O (87.5:12.5 v/v) followed by a water rinse and distilled water bath for 2 min. This etch does not attack the pure semiconductor surfaces. Si samples showed typical hydrophobic properties after etching, indicating a clean Si surface. We have investigated the clean semiconductor surfaces by AFM to estimate the cleanness and flatness of the respective surfaces. The maximum particle coverage was 0.2%, which is well below the peptide PACs discussed in the text. After images were leveled by a first-order plane fit when necessary to remove a sample tilt, the maximum roughness rms of the clean (100) sample surfaces was 0.37 nm, while for most samples the roughness rms value was well below 0.30 nm. These values are typical for freshly etched surfaces of the investigated semiconductors.
  • 24
    • 9744234627 scopus 로고    scopus 로고
    • note
    • + silicon with a 123-μm cantilever and a spring constant of 59 N/m driven near its resonance frequency of 380 kHz. Scan rates were of the order of 1.5-0.15 μm/s, depending on the image size of 3-0.5 μm (2-3.3 s per image line). Very similar images have been obtained with other probes (226 μm. 188 kHz, 45 N/m). Sample-specific peptide PACs have been obtained by performing a grain analysis for each image using the SPIP program (version 1.9223, Image Metrology A/S, Lyngby, Denmark). Images were leveled using a first-order plane fit when necessary to remove a sample tilt. By doing so it was possible to set the minimum detection height in the grain analysis to 0 nm above the average surface height, thus allowing each cluster to be detected.
  • 31
    • 9744286481 scopus 로고    scopus 로고
    • note
    • Apparent errors arise from a certain arbitrariness in choosing the surface areas for the grain analysis, the uncertainty in estimating the PAC on such selected surface pieces, and the sample reproducibility. However, since the PACs for nominally equal surface areas on different samples show essentially the same value spread as those for such areas on the same sample, it appears that the reproducibility accuracy is higher than the degree of reliance for the PAC on one and the same sample. We believe the natural inhomogeneity of the peptide cluster allocation on the surfaces to be the main source for the estimated errors.
  • 32
    • 9744238273 scopus 로고    scopus 로고
    • note
    • This is not surprising since the peptide solution was not oversaturated. Therefore only a small amount of peptide should have sunk down mechanically in the water during sample preparation. Washing the fresh surfaces as practiced here and in ref 17 to remove unbound particles therefore increases the accuracy of the PAC results but does not change their magnitude.
  • 34
    • 33746485436 scopus 로고
    • Allred, A. L. J. Inorg. Nucl. Chem. 1961, 17, 215-220. Pauling, L. The Nature of the Chemical Bond, 3rd ed.; Cornell University; New York, 1960.
    • (1961) J. Inorg. Nucl. Chem. , vol.17 , pp. 215-220
    • Allred, A.L.1
  • 36
    • 9744281421 scopus 로고    scopus 로고
    • note
    • 1-xAs mixed crystals have been obtained by interpolating between the Al and Ga ENs according to the x/(1-x) ratio. We annotate that also for other parameters derived from the EN of the constituting atoms, a correlation with the PACs (while not as persuasive as here) can be found.
  • 37
    • 9744279972 scopus 로고    scopus 로고
    • note
    • 0.02As and Si might largely prevent even van der Waals-type binding as the respective PACs are extremely small. Adhesion on Ge and Si surfaces is additionally low because they lack the polar character.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.